FFCP PHASE1:Hg19::chr17:7387894..7387917,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5430 | |EntrezGene=5430 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9187 | |HGNC=9187 | ||
|TSSclassifier=strong | |||
|UniProt=P24928 | |UniProt=P24928 | ||
|association_with_transcript=28bp_to_ENST00000322644_5end | |association_with_transcript=28bp_to_ENST00000322644_5end | ||
|cluster_id=chr17:7387894..7387917,+ | |||
|description=CAGE_peak_6_at_POLR2A_5end | |description=CAGE_peak_6_at_POLR2A_5end | ||
|id=chr17:7387894..7387917,+ | |id=chr17:7387894..7387917,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.76e-18;5!CL:0000163;1.58e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.39e-18,5;CL:0002028,1.39e-18,5;CL:0000163,1.38e-10,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;7.76e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.31e-21,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;2.67e-11;1!UBERON:0000026;2.67e-11;1!UBERON:0008784;2.67e-11;1!UBERON:0006058;2.67e-11;1!UBERON:0003663;2.67e-11;1!UBERON:0004256;2.67e-11;1!UBERON:0004708;2.67e-11;1!UBERON:0002101;2.67e-11;1!UBERON:0004709;2.67e-11;1!UBERON:0002529;2.67e-11;1!UBERON:0010538;2.67e-11;1!UBERON:0003661;2.67e-11;1!UBERON:0010890;2.67e-11;1!UBERON:0002471;2.67e-11;1!UBERON:0001383;2.67e-11;1!UBERON:0010758;2.67e-11;1!UBERON:0010707;2.67e-11;1!UBERON:0000978;2.67e-11;1!UBERON:0002103;2.67e-11;1!UBERON:0001665;2.67e-11;1!UBERON:0003823;2.67e-11;1!UBERON:0000154;2.67e-11;1!UBERON:0010709;2.67e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.28e-11,1;UBERON:0001389,3.28e-11,1;UBERON:0000026,3.28e-11,1;UBERON:0008784,3.28e-11,1;UBERON:0006058,3.28e-11,1;UBERON:0003663,3.28e-11,1;UBERON:0004256,3.28e-11,1;UBERON:0004708,3.28e-11,1;UBERON:0002101,3.28e-11,1;UBERON:0004709,3.28e-11,1;UBERON:0002529,3.28e-11,1;UBERON:0010538,3.28e-11,1;UBERON:0003661,3.28e-11,1;UBERON:0010890,3.28e-11,1;UBERON:0002471,3.28e-11,1;UBERON:0001383,3.28e-11,1;UBERON:0004357,3.28e-11,1;UBERON:0004347,3.28e-11,1;UBERON:0005420,3.28e-11,1;UBERON:0005732,3.28e-11,1;UBERON:0010758,3.28e-11,1;UBERON:0010707,3.28e-11,1;UBERON:0000978,3.28e-11,1;UBERON:0002103,3.28e-11,1;UBERON:0001665,3.28e-11,1;UBERON:0003823,3.28e-11,1;UBERON:0000154,3.28e-11,1;UBERON:0010709,3.28e-11,1;UBERON:0005733,3.28e-11,1;UBERON:0005730,3.28e-11,1 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.0764134057479513,0,0.157421562627358,0,0.383829398097213,0.154816123316076,0,0,0.369754010166788,0,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0.447830948479849,0.32389366601898,0.515151135268373,0.436194716338694,0.377875943688809,0,0.464858073811369,0.411167888021826,0.309706370895104,0,0.256160706529101,0,2.06847408441971,1.93645405075148,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,0.918251677112708,0.641858054152187,0.639337125799041,0.329851300186716,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.260118695119756,0,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.604820229674197,0.267440195783507,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0.370784442784429,0,0.522389211897802,0.26591592103773,0,0,0.371457501329565,0,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0,0,0.35576626268671,0.33472061276467,0.805658634218294,0.760272105718513,0.488124115096339,0,0,0.17859945656816,0,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,0,0,0,0.560677600142307,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0.250237039743928,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,0,0.194874010322397,0.252433774244115,0.276149695926898,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.580969714347592,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0.219500570817251,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0.383382679165211,0,0.792435906119034,1.86595303986695,1.15295962733569,1.51490920111656,0,1.14596527667483,0,0,0,0,0.857479297891735,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.394061520403854,0.646882724578552,0.128343036279748,0.254094624222463,0,0,0,0,0.749007023947182,0,0.414415513436035,0.12269149171914,0.500170521059677,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.260650843404249,0.783204629850962,0,0,0.215714200818617,0,0.606255142892519,0,0.30239029332968,0,0.153461973288062,0,0,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0.120859449591622,1.20303882181971,0.276242966807689,0.114814448164607,0,0.393373244878272,0,0,0.784349769176855,1.46139224653261,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0.580024309752732,0.462145851343933,0.15350367472613,0.137836572484531,0.322260734604821,0,0,0,0.165284915360978,0.576570202095319,0.127612712494584,0,0,0,0.6970372701606,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0.235624804691373,0,1.58510321173008,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,1.31178950409327,0.202910376962704,0,0.563391205064483,0,0,0.35667105148125,0.354761064070598,0,0.658589785919804,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0.121360521749513,0.557216921387392,0.284136146806413,0,0,0.307160702099232,0,0.140669416410513,0.222617410045812,0,0.422250816255987,0.398495976502139,0,0.251932747854276,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0.472775363535873,0.344743373241465,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0.461701551022782,0,0,0.0897576444097721,0.108647371922008,0.31900115973192,0.457987967009312,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0.104421949505455,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0.450970258243478,0.311064574191741,0,0,0,0,0,0.138674673013139,0.347119476670262,0.0979923974143777,0.0870592065804026,0.34945333648406,0,0,0.146178634172371,0.164230914106418,0.290967049465258,0.0882561266915003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| ||
|short_description=p6@POLR2A | |short_description=p6@POLR2A | ||
}} | }} |
Latest revision as of 13:17, 17 September 2015
Short description: | p6@POLR2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_POLR2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000322644_5end |
EntrezGene: | POLR2A |
HGNC: | 9187 |
UniProt: | P24928 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.39e-18 | 5 |
basophil mast progenitor cell | 1.39e-18 | 5 |
endocrine cell | 1.38e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 3.28e-11 | 1 |
soleus muscle | 3.28e-11 | 1 |
appendage | 3.28e-11 | 1 |
lower limb segment | 3.28e-11 | 1 |
multi-limb segment region | 3.28e-11 | 1 |
hindlimb muscle | 3.28e-11 | 1 |
hindlimb zeugopod muscle | 3.28e-11 | 1 |
paired limb/fin | 3.28e-11 | 1 |
limb | 3.28e-11 | 1 |
pelvic appendage | 3.28e-11 | 1 |
limb segment | 3.28e-11 | 1 |
paired limb/fin segment | 3.28e-11 | 1 |
limb muscle | 3.28e-11 | 1 |
pelvic complex muscle | 3.28e-11 | 1 |
zeugopod | 3.28e-11 | 1 |
muscle of leg | 3.28e-11 | 1 |
paired limb/fin bud | 3.28e-11 | 1 |
limb bud | 3.28e-11 | 1 |
pelvic appendage bud | 3.28e-11 | 1 |
limb/fin field | 3.28e-11 | 1 |
subdivision of organism along appendicular axis | 3.28e-11 | 1 |
appendage girdle complex | 3.28e-11 | 1 |
leg | 3.28e-11 | 1 |
hindlimb | 3.28e-11 | 1 |
triceps surae | 3.28e-11 | 1 |
hindlimb zeugopod | 3.28e-11 | 1 |
posterior region of body | 3.28e-11 | 1 |
pelvic complex | 3.28e-11 | 1 |
limb field | 3.28e-11 | 1 |
hindlimb/pelvic fin field | 3.28e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.31e-21 | 2 |