FFCP PHASE1:Hg19::chr12:56756553..56756620,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=319 | |EntrezGene=319 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=615 | |HGNC=615 | ||
|TSSclassifier=strong | |||
|UniProt=Q13790,F5GXS5 | |UniProt=Q13790,F5GXS5 | ||
|association_with_transcript=0bp_to_ENST00000398189,ENST00000541105,NM_001638,uc001sle.1_5end | |association_with_transcript=0bp_to_ENST00000398189,ENST00000541105,NM_001638,uc001sle.1_5end | ||
|cluster_id=chr12:56756553..56756620,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_APOF_5end | |description=CAGE_peak_1_at_APOF_5end | ||
|id=chr12:56756553..56756620,- | |id=chr12:56756553..56756620,- | ||
|ontology_enrichment_celltype=CL:0000181!2.25e-24!12;CL:0000417!2.25e-24!12;CL:0000668!2.25e-24!12;CL:0000414!2.25e-24!12;CL:0000412!2.25e-24!12;CL:0000182!2.25e-24!12;CL:0000214!1.77e-11!3 | |ontology_enrichment_celltype=CL:0000181!2.25e-24!12;CL:0000417!2.25e-24!12;CL:0000668!2.25e-24!12;CL:0000414!2.25e-24!12;CL:0000412!2.25e-24!12;CL:0000182!2.25e-24!12;CL:0000214!1.77e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.17e-59;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.17e-59,12;CL:0000223,3.03e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.46e-44;11!UBERON:0009497;9.07e-38;13!UBERON:0001041;1.58e-16;30!UBERON:0003104;5.79e-16;31!CL:0000223;3.56e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@APOF | |short_description=p1@APOF | ||
}} | }} |
Latest revision as of 10:59, 19 September 2015
Short description: | p1@APOF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APOF_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000398189, ENST00000541105, NM_001638, uc001sle.1_5end |
EntrezGene: | APOF |
HGNC: | 615 |
UniProt: | Q13790F5GXS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.17e-59 | 12 |
endodermal cell | 3.03e-12 | 58 |