FFCP PHASE1:Hg19::chr17:7284402..7284414,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8711 | |EntrezGene=8711 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11940 | |HGNC=11940 | ||
|TSSclassifier=strong | |||
|UniProt=Q13470 | |UniProt=Q13470 | ||
|association_with_transcript=37bp_to_ENST00000311668,uc002ggi.3,uc002ggj.3,uc010cmf.2_5end | |association_with_transcript=37bp_to_ENST00000311668,uc002ggi.3,uc002ggj.3,uc010cmf.2_5end | ||
|cluster_id=chr17:7284402..7284414,+ | |||
|coexpression_cluster_id=C511 | |||
|description=CAGE_peak_1_at_TNK1_5end | |description=CAGE_peak_1_at_TNK1_5end | ||
|id=chr17:7284402..7284414,+ | |id=chr17:7284402..7284414,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.93e-52!254;CL:0002076!2.62e-18!43;CL:0000223!8.80e-18!59;CL:0002251!2.76e-09!21;CL:0002368!7.76e-08!13 | |ontology_enrichment_celltype=CL:0000066!3.93e-52!254;CL:0002076!2.62e-18!43;CL:0000223!8.80e-18!59;CL:0002251!2.76e-09!21;CL:0002368!7.76e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.04e-17;42!CL:0002251;3.47e-12;20!CL:0002368;7.98e-10;13!CL:1000507;2.28e-07;10!CL:1000494;2.28e-07;10!CL:1000497;4.25e-07;17!CL:0002518;4.25e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.63e-50,253;CL:0002076,1.02e-23,42;CL:0000223,2.38e-22,58;CL:0002251,2.30e-12,20;CL:0002368,4.47e-10,13;CL:0000076,3.48e-08,63;CL:1000507,2.85e-07,10;CL:1000494,2.85e-07,10;CL:1000497,3.66e-07,17;CL:0002518,3.66e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000223;4.02e-12;58!UBERON:0008947;1.92e-07;29!UBERON:0006595;9.24e-07;86 | |||
|ontology_enrichment_disease=DOID:305!5.99e-25!106;DOID:0050687!5.65e-19!143;DOID:299!9.43e-09!25;DOID:1749!1.29e-08!14;DOID:162!4.95e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.37e-11;14!DOID:299;4.04e-09;25!DOID:305;4.49e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.58e-26,106;DOID:0050687,2.09e-18,143;DOID:1749,8.24e-11,14;DOID:299,2.36e-09,25;DOID:162,4.10e-08,235;DOID:14566,1.78e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.53e-25!169;UBERON:0000925!6.53e-25!169;UBERON:0006595!6.53e-25!169;UBERON:0001007!1.76e-18!155;UBERON:0001555!1.76e-18!155;UBERON:0007026!1.76e-18!155;UBERON:0004921!1.21e-17!129;UBERON:0004185!1.21e-17!129;UBERON:0000077!1.03e-15!130;UBERON:0001004!1.35e-14!72;UBERON:0001041!1.02e-13!98;UBERON:0000065!5.02e-12!53;UBERON:0005911!9.28e-12!82;UBERON:0000466!9.50e-12!126;UBERON:0005177!1.92e-11!107;UBERON:0008947!4.62e-11!38;UBERON:0003258!4.62e-11!38;UBERON:0000064!5.16e-11!219;UBERON:0000062!2.29e-10!511;UBERON:0000464!4.59e-10!104;UBERON:0009569!2.32e-09!113;UBERON:0000072!2.68e-09!46;UBERON:0001048!8.78e-09!168;UBERON:0001008!1.05e-08!45;UBERON:0000481!1.19e-08!347;UBERON:0006554!1.70e-08!44;UBERON:0005153!2.75e-08!37;UBERON:0000063!2.86e-08!97;UBERON:0005178!2.67e-07!34;UBERON:0002224!2.67e-07!34;UBERON:0002530!4.75e-07!59;UBERON:0005181!8.18e-07!35;UBERON:0000161!9.41e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;9.68e-10;30!UBERON:0001008;9.68e-10;30!UBERON:0000065;2.51e-09;44!UBERON:0000072;1.36e-08;37!UBERON:0001004;1.91e-07;65!UBERON:0004211;2.28e-07;10!UBERON:0009773;2.28e-07;10!UBERON:0001231;2.28e-07;10!UBERON:0004810;2.28e-07;10!UBERON:0005911;5.06e-07;36!UBERON:0004921;8.70e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.08e-23,160;UBERON:0000925,1.08e-23,160;UBERON:0006595,1.08e-23,160;UBERON:0001007,2.37e-17,145;UBERON:0001555,2.37e-17,145;UBERON:0007026,2.37e-17,145;UBERON:0004921,3.63e-17,118;UBERON:0001041,5.65e-13,87;UBERON:0001004,9.23e-13,74;UBERON:0001008,1.27e-12,48;UBERON:0006554,2.40e-12,47;UBERON:0005177,2.54e-11,101;UBERON:0008947,6.24e-11,38;UBERON:0003258,6.24e-11,38;UBERON:0000065,7.08e-11,54;UBERON:0005911,1.37e-09,82;UBERON:0009569,7.10e-09,112;UBERON:0000072,2.85e-08,47;UBERON:0004810,2.85e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.93174298402414,16.7472280313383,3.71350332621293,4.48403862988371,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0.154816123316076,3.67768489791571,11.4458249135735,11.0926203050036,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.722878304769133,0.50133791063589,0.579386075843295,0.795285947051099,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.982343066232845,13.4789256668241,10.0111799551796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,1.20848795132744,3.80136052859256,1.46437234528902,0,0,0,0,0,0,0,0,0,0,13.9550096685611,0,0,0,0.573673241497627,0,0.560677600142307,1.06748995729705,0,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.423863802319124,0.300091096084402,0,1.03056216018252,0.18611685633159,0,0.68205903612839,2.01947019395292,0.184099797284599,0.969876340912871,0.355009592516614,0.10075209822764,0.67824236924195,5.7978255948989,3.27295344709002,5.16248271700207,2.43947412259191,1.72288698817931,3.48581828608555,1.55491582523056,1.7662459561294,2.55484151353081,0,0,0,0,0,2.12952240071719,2.69735504124963,3.37415441836875,3.08823123650703,2.61455332910887,3.08451804844426,2.56179485504312,1.76599318612811,4.23221872641029,0,0,0,2.94017422771084,1.26755034821831,8.84544495009863,1.77236972004421,0,3.32068784066407,0.857839051492628,4.2802611309364,14.6122279234905,3.51851403440708,4.53683381276795,0,0,0,0.231860809950154,0,1.01056513432752,0.462985512576611,1.14152491340759,13.4334747653077,12.8772924314231,0,0,0,2.81201501960331,11.0868204611247,6.09632918142262,0.985143749731331,5.23141089325132,5.75074018747817,0,0,1.4512968087854,2.16179930125442,2.90357596880674,0,0.763976851116555,1.17217447210047,3.4214489204541,0.102827492703324,0,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,2.71310802695722,0,0,0.355391948742546,0,2.1100756394171,0.871533458600294,2.19940580600526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0.178428988797162,0.788512075169673,0.819989904948992,0,0,0,0,0,0.173767228936166,0,0,0,0,0,13.3376131436354,13.3148351608398,7.86214762657169,0,0.306923946576125,0.280660094433074,0,0.511707249066704,0.321707842287215,0,0,0,0,0,0,2.1754700926492,5.01266175758212,4.41988746892302,0.229628896329213,0,0,4.51199612907412,1.30926073077505,7.0591479225917,2.92278449306521,1.37217117560738,0,0,0.647747748306418,1.54227252690289,1.62567862526312,3.01013864312912,4.58777291481069,9.14183609821597,2.0148727924996,0,0,1.02580050046556,1.96808787419823,0.976135183992909,0.9273691048295,0,0,4.01985876597321,1.95018073810956,0,0,0,0,0,0,0,0,0,5.78497203763423,7.11103249250893,14.8030746493718,4.8555734810664,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0.844430541190656,0.658589785919804,0.379473173765715,0.349934720244983,2.59799704358883,6.70302275535787,8.71127878890581,0.470719003883896,7.74909670808214,11.7930032967338,7.98174276366016,4.82419140434615,0,0,0,0,0,0,0,0,0,0,6.12600539952579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67276215673701,1.31857361344705,0,0,0,10.9822462979337,4.15750553165694,8.90766036087773,0,0.140669416410513,0,0,8.86726714137573,1.39473591775749,0.552567831062295,1.51159648712566,0,0,0,1.97710372524119,1.25314822272926,0,1.28236427328014,0,0,0,0.185536196323703,0,2.86470537193757,4.28553999981359,3.62499787717397,4.32415103484899,1.77977555204936,2.83665218121524,1.37897349296586,0,2.08349993919951,0,0.241192877250816,12.2065389053667,4.42317039724898,4.72876190325676,0,1.41620002574687,10.5962045651738,1.76985594558733,0,0.922255617552241,2.33369875465408,2.82483166997221,8.29403015302991,0.824378340616761,2.66517388009317,0,0,0.997270091400938,1.1279783030859,1.9606253431774,1.34257269580674,0.189753732724185,0.476809736941136,0,1.46909527343233,2.82706142867882,0,6.96683351754953,3.98059040265026,1.83309043480088,0,0,0,0,0,0,0,2.15231080825299,0,2.76209081994573,1.20990716048664,0,0.505492637027904,1.35291077473043,0.72581733978073,0.664653872707185,0,1.2557316736289,1.19472429772959,0.853828638089378,0,4.5125531967134,1.7638631534588,2.08942095792966,1.7472666824203,0.687944129886466,3.57998425769615,3.50828722013691,3.20250282507516,2.32773639572207,0,2.48578814858586,0.274083849293502,0,0,5.08433595110488,0.721429382263803,1.92107695265417,5.19504984913539,4.32271251462318,0,0,3.16920555573929,1.86378803348149,3.77110455386873,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,1.19807400299395,1.71690419254628,0.669514372325618,0.470284307407084,0,4.6598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| ||
|short_description=p1@TNK1 | |short_description=p1@TNK1 | ||
}} | }} |
Latest revision as of 09:06, 17 September 2015
Short description: | p1@TNK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNK1_5end |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | 37bp_to_ENST00000311668, uc002ggi.3, uc002ggj.3, uc010cmf.2_5end |
EntrezGene: | TNK1 |
HGNC: | 11940 |
UniProt: | Q13470 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.63e-50 | 253 |
endo-epithelial cell | 1.02e-23 | 42 |
endodermal cell | 2.38e-22 | 58 |
epithelial cell of alimentary canal | 2.30e-12 | 20 |
respiratory epithelial cell | 4.47e-10 | 13 |
squamous epithelial cell | 3.48e-08 | 63 |
kidney tubule cell | 2.85e-07 | 10 |
nephron tubule epithelial cell | 2.85e-07 | 10 |
kidney cell | 3.66e-07 | 17 |
kidney epithelial cell | 3.66e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.08e-23 | 160 |
endoderm | 1.08e-23 | 160 |
presumptive endoderm | 1.08e-23 | 160 |
digestive system | 2.37e-17 | 145 |
digestive tract | 2.37e-17 | 145 |
primitive gut | 2.37e-17 | 145 |
subdivision of digestive tract | 3.63e-17 | 118 |
foregut | 5.65e-13 | 87 |
respiratory system | 9.23e-13 | 74 |
renal system | 1.27e-12 | 48 |
urinary system structure | 2.40e-12 | 47 |
trunk region element | 2.54e-11 | 101 |
respiratory primordium | 6.24e-11 | 38 |
endoderm of foregut | 6.24e-11 | 38 |
respiratory tract | 7.08e-11 | 54 |
endo-epithelium | 1.37e-09 | 82 |
subdivision of trunk | 7.10e-09 | 112 |
segment of respiratory tract | 2.85e-08 | 47 |
nephron tubule epithelium | 2.85e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.58e-26 | 106 |
cell type cancer | 2.09e-18 | 143 |
squamous cell carcinoma | 8.24e-11 | 14 |
adenocarcinoma | 2.36e-09 | 25 |
cancer | 4.10e-08 | 235 |
disease of cellular proliferation | 1.78e-07 | 239 |