FFCP PHASE1:Hg19::chr12:53297486..53297500,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3856 | |EntrezGene=3856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6446 | |HGNC=6446 | ||
|TSSclassifier=strong | |||
|UniProt=F8VP67 | |UniProt=F8VP67 | ||
|association_with_transcript=-54bp_to_ENST00000546900_5end | |association_with_transcript=-54bp_to_ENST00000546900_5end | ||
|cluster_id=chr12:53297486..53297500,- | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_15_at_KRT8_5end | |description=CAGE_peak_15_at_KRT8_5end | ||
|id=chr12:53297486..53297500,- | |id=chr12:53297486..53297500,- | ||
|ontology_enrichment_celltype=CL:0000066!1.82e-12!254;CL:0000077!2.74e-09!19;CL:0002150!2.48e-07!3;CL:0000861!2.48e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.82e-12!254;CL:0000077!2.74e-09!19;CL:0002150!2.48e-07!3;CL:0000861!2.48e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;6.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,6.88e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.46e-19!106;DOID:0050687!5.52e-17!143;DOID:162!6.27e-12!235;DOID:14566!1.94e-11!239;DOID:299!5.17e-11!25;DOID:5093!2.78e-07!4;DOID:1612!2.78e-07!4;DOID:3493!8.73e-07!2 | |ontology_enrichment_disease=DOID:305!3.46e-19!106;DOID:0050687!5.52e-17!143;DOID:162!6.27e-12!235;DOID:14566!1.94e-11!239;DOID:299!5.17e-11!25;DOID:5093!2.78e-07!4;DOID:1612!2.78e-07!4;DOID:3493!8.73e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.02e-38;4!DOID:1612;2.02e-38;4!DOID:299;7.44e-17;25!DOID:3493;1.17e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.90e-38,4;DOID:1612,1.90e-38,4;DOID:299,7.57e-17,25;DOID:3493,1.22e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000059!1.18e-11!11;UBERON:0004907!4.38e-09!5;UBERON:0004921!8.88e-09!129;UBERON:0004185!8.88e-09!129;UBERON:0005409!1.84e-08!35;UBERON:0000160!6.49e-08!27;UBERON:0001155!1.53e-07!9;UBERON:0001007!2.04e-07!155;UBERON:0001555!2.04e-07!155;UBERON:0007026!2.04e-07!155;UBERON:0004119!8.31e-07!169;UBERON:0000925!8.31e-07!169;UBERON:0006595!8.31e-07!169;UBERON:0001052!8.43e-07!4 | |ontology_enrichment_uberon=UBERON:0000059!1.18e-11!11;UBERON:0004907!4.38e-09!5;UBERON:0004921!8.88e-09!129;UBERON:0004185!8.88e-09!129;UBERON:0005409!1.84e-08!35;UBERON:0000160!6.49e-08!27;UBERON:0001155!1.53e-07!9;UBERON:0001007!2.04e-07!155;UBERON:0001555!2.04e-07!155;UBERON:0007026!2.04e-07!155;UBERON:0004119!8.31e-07!169;UBERON:0000925!8.31e-07!169;UBERON:0006595!8.31e-07!169;UBERON:0001052!8.43e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.61e-25;22!UBERON:0000059;3.75e-24;11!UBERON:0000160;8.59e-23;17!UBERON:0001052;2.59e-17;4!UBERON:0004921;3.37e-16;33!UBERON:0000310;8.03e-16;10!UBERON:0001443;1.92e-14;11!UBERON:0004907;4.69e-14;5!UBERON:0001155;2.75e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,3.75e-24,11;UBERON:0000160,9.20e-23,17;UBERON:0005409,1.54e-22,25;UBERON:0001052,3.06e-17,4;UBERON:0000310,7.83e-16,10;UBERON:0001443,1.87e-14,11;UBERON:0004907,5.36e-14,5;UBERON:0001155,2.55e-08,9 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,6.3216351836742,4.29243081047436,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0.552567831062295,0.251932747854276,0.306806047506464,0,0,0.179736702294654,0,0,0,0,0,0,0,0,6.51069402713083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0.335643173951685,0,0,0,0.163232808159148,0.282706142867882,0,2.98578579323551,0.796118080530053,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.195984794828755,0,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0.353024506766001,0,0,0,0,0,0.0801588202515337,0,4.19600180122473,0,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52322084867518,0,0,0,0,0,0,0,0,0,0.192619830407303,0.643324774124777,0.260994291965212,0,0,0,0.179088841081487,0,0,0.353378291891762,1.92914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,1.12108865325516,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883352102537187,2.43835849964539,0,0,0,0,0,0,0,0,0,0.150962843566674,1.389134845943,0.437119121007915,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0.718601616852695,0,0,0,0,0,0 | ||
|short_description=p15@KRT8 | |short_description=p15@KRT8 | ||
}} | }} |
Latest revision as of 01:05, 19 September 2015
Short description: | p15@KRT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_KRT8_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | -54bp_to_ENST00000546900_5end |
EntrezGene: | KRT8 |
HGNC: | 6446 |
UniProt: | F8VP67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
large intestine | 3.75e-24 | 11 |
intestine | 9.20e-23 | 17 |
gastrointestinal system | 1.54e-22 | 25 |
rectum | 3.06e-17 | 4 |
breast | 7.83e-16 | 10 |
chest | 1.87e-14 | 11 |
lower digestive tract | 5.36e-14 | 5 |
colon | 2.55e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.90e-38 | 4 |
breast cancer | 1.90e-38 | 4 |
adenocarcinoma | 7.57e-17 | 25 |
signet ring cell adenocarcinoma | 1.22e-09 | 2 |