FFCP PHASE1:Hg19::chr12:52911408..52911421,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52911408..52911421,+ | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr12:52911408..52911421,+ | |description=CAGE_peak_at_chr12:52911408..52911421,+ | ||
|id=chr12:52911408..52911421,+ | |id=chr12:52911408..52911421,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.60e-14!43;CL:0000066!2.63e-13!254;CL:0002327!1.54e-12!4;CL:0000244!1.95e-12!4;CL:0000731!1.95e-12!4;CL:0002159!3.14e-10!13;CL:0000223!5.99e-10!59;CL:0002368!1.84e-09!13;CL:0000240!5.67e-09!6;CL:0000311!5.67e-09!6;CL:0000079!5.67e-09!6;CL:0000237!5.67e-09!6;CL:0000036!5.67e-09!6;CL:0000357!5.67e-09!6;CL:0000114!5.67e-09!6;CL:0002251!2.72e-08!21;CL:0000349!3.31e-08!3;CL:0002577!3.31e-08!3;CL:0002077!4.06e-07!33;CL:0002336!5.90e-07!1;CL:0002261!5.90e-07!1;CL:0002170!5.90e-07!1;CL:0000076!9.71e-07!62 | |ontology_enrichment_celltype=CL:0002076!1.60e-14!43;CL:0000066!2.63e-13!254;CL:0002327!1.54e-12!4;CL:0000244!1.95e-12!4;CL:0000731!1.95e-12!4;CL:0002159!3.14e-10!13;CL:0000223!5.99e-10!59;CL:0002368!1.84e-09!13;CL:0000240!5.67e-09!6;CL:0000311!5.67e-09!6;CL:0000079!5.67e-09!6;CL:0000237!5.67e-09!6;CL:0000036!5.67e-09!6;CL:0000357!5.67e-09!6;CL:0000114!5.67e-09!6;CL:0002251!2.72e-08!21;CL:0000349!3.31e-08!3;CL:0002577!3.31e-08!3;CL:0002077!4.06e-07!33;CL:0002336!5.90e-07!1;CL:0002261!5.90e-07!1;CL:0002170!5.90e-07!1;CL:0000076!9.71e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000240;5.37e-34;6!CL:0000311;5.37e-34;6!CL:0000079;5.37e-34;6!CL:0000237;5.37e-34;6!CL:0002336;1.49e-23;1!CL:0002261;1.49e-23;1!CL:0002170;1.49e-23;1!CL:0000312;7.57e-19;5!CL:0002159;6.07e-15;14!CL:0000575;2.74e-12;2!CL:0000362;6.38e-11;9!CL:0002077;9.44e-10;34!CL:0002577;1.26e-08;3!CL:0000244;8.85e-07;4!CL:0002327;8.85e-07;4!CL:0000731;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000240,5.37e-34,6;CL:0000311,5.37e-34,6;CL:0000079,5.37e-34,6;CL:0000237,5.37e-34,6;CL:0000036,5.37e-34,6;CL:0000357,5.37e-34,6;CL:0000114,5.37e-34,6;CL:0002336,1.34e-23,1;CL:0002261,1.34e-23,1;CL:0002170,1.34e-23,1;CL:0000312,7.92e-19,5;CL:0002159,6.37e-15,14;CL:0000575,2.90e-12,2;CL:0000362,6.54e-11,9;CL:0002077,7.96e-11,34;CL:0002577,1.21e-08,3;CL:0000221,1.17e-07,72;CL:0002327,7.70e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000357;5.37e-34;6!CL:0000114;5.37e-34;6 | |||
|ontology_enrichment_disease=DOID:1749!5.21e-09!14;DOID:3151!8.21e-07!1;DOID:3149!8.21e-07!1 | |ontology_enrichment_disease=DOID:1749!5.21e-09!14;DOID:3151!8.21e-07!1;DOID:3149!8.21e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3151;3.67e-23;1!DOID:3149;3.67e-23;1!DOID:3451;2.74e-12;2!DOID:4159;2.74e-12;2!DOID:0060122;2.74e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.13e-23,1;DOID:3149,5.13e-23,1;DOID:3451,3.24e-12,2;DOID:4159,3.24e-12,2;DOID:0060122,3.24e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001911!1.54e-12!4;UBERON:0005333!1.54e-12!4;UBERON:0008425!1.54e-12!4;UBERON:0005311!1.54e-12!4;UBERON:0003729!4.39e-10!5;UBERON:0000365!4.81e-10!5;UBERON:0005631!3.24e-09!14;UBERON:0000158!3.24e-09!14;UBERON:0005910!1.92e-08!6;UBERON:0004119!1.37e-07!169;UBERON:0000925!1.37e-07!169;UBERON:0006595!1.37e-07!169;UBERON:0000305!3.64e-07!7 | |ontology_enrichment_uberon=UBERON:0001911!1.54e-12!4;UBERON:0005333!1.54e-12!4;UBERON:0008425!1.54e-12!4;UBERON:0005311!1.54e-12!4;UBERON:0003729!4.39e-10!5;UBERON:0000365!4.81e-10!5;UBERON:0005631!3.24e-09!14;UBERON:0000158!3.24e-09!14;UBERON:0005910!1.92e-08!6;UBERON:0004119!1.37e-07!169;UBERON:0000925!1.37e-07!169;UBERON:0006595!1.37e-07!169;UBERON:0000305!3.64e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;6.50e-07;15!UBERON:0007376;6.50e-07;15!UBERON:0001987;8.85e-07;4!UBERON:0000014;8.85e-07;4!UBERON:0001911;8.85e-07;4!UBERON:0000964;8.85e-07;4!UBERON:0010409;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,6.59e-07,15;UBERON:0007376,6.59e-07,15;UBERON:0007383,6.59e-07,15;UBERON:0001911,7.70e-07,4;UBERON:0005333,7.70e-07,4;UBERON:0008425,7.70e-07,4;UBERON:0005311,7.70e-07,4;UBERON:0001987,8.61e-07,4;UBERON:0004340,8.61e-07,4;UBERON:0000964,9.11e-07,4;UBERON:0010409,9.11e-07,4;UBERON:0004348,9.11e-07,4;UBERON:0005427,9.11e-07,4;UBERON:0000014,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41450627898976,0,3.11639814476056,2.59247646443883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,1.97028749946266,0.871901815541886,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41450627898976,0,3.11639814476056,2.59247646443883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,1.97028749946266,0.871901815541886,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:52911408..52911421,+ | |short_description=p@chr12:52911408..52911421,+ | ||
}} | }} |
Latest revision as of 09:37, 24 July 2015
Short description: | p@chr12:52911408..52911421, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52911408..52911421, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelial cell | 5.37e-34 | 6 |
keratin accumulating cell | 5.37e-34 | 6 |
stratified epithelial cell | 5.37e-34 | 6 |
keratinizing barrier epithelial cell | 5.37e-34 | 6 |
epithelial fate stem cell | 5.37e-34 | 6 |
stratified epithelial stem cell | 5.37e-34 | 6 |
surface ectodermal cell | 5.37e-34 | 6 |
buccal mucosa cell | 1.34e-23 | 1 |
endothelial cell of viscerocranial mucosa | 1.34e-23 | 1 |
keratinized cell of the oral mucosa | 1.34e-23 | 1 |
keratinocyte | 7.92e-19 | 5 |
general ecto-epithelial cell | 6.37e-15 | 14 |
corneal epithelial cell | 2.90e-12 | 2 |
epidermal cell | 6.54e-11 | 9 |
ecto-epithelial cell | 7.96e-11 | 34 |
placental epithelial cell | 1.21e-08 | 3 |
ectodermal cell | 1.17e-07 | 72 |
mammary gland epithelial cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 6.59e-07 | 15 |
outer epithelium | 6.59e-07 | 15 |
enveloping layer of ectoderm | 6.59e-07 | 15 |
mammary gland | 7.70e-07 | 4 |
mammary bud | 7.70e-07 | 4 |
mammary ridge | 7.70e-07 | 4 |
mammary placode | 7.70e-07 | 4 |
placenta | 8.61e-07 | 4 |
allantois | 8.61e-07 | 4 |
cornea | 9.11e-07 | 4 |
eye surface | 9.11e-07 | 4 |
optic eminence | 9.11e-07 | 4 |
corneal primordium | 9.11e-07 | 4 |
zone of skin | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.13e-23 | 1 |
keratoacanthoma | 5.13e-23 | 1 |
skin carcinoma | 3.24e-12 | 2 |
skin cancer | 3.24e-12 | 2 |
integumentary system cancer | 3.24e-12 | 2 |