FFCP PHASE1:Hg19::chr12:50419141..50419170,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29127 | |EntrezGene=29127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9804 | |HGNC=9804 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0H5 | |UniProt=Q9H0H5 | ||
|association_with_transcript=12bp_to_ENST00000454520_5end | |association_with_transcript=12bp_to_ENST00000454520_5end | ||
|cluster_id=chr12:50419141..50419170,- | |||
|description=CAGE_peak_2_at_RACGAP1_5end | |description=CAGE_peak_2_at_RACGAP1_5end | ||
|id=chr12:50419141..50419170,- | |id=chr12:50419141..50419170,- | ||
|ontology_enrichment_celltype=CL:0000066!7.32e-22!254 | |ontology_enrichment_celltype=CL:0000066!7.32e-22!254 | ||
|ontology_enrichment_celltype_v019=CL:0002251;2.13e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.07e-29,253;CL:0000076,1.13e-08,63;CL:0000223,8.59e-08,58;CL:0002251,1.36e-07,20;CL:0002076,4.73e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.52e-11;29 | |||
|ontology_enrichment_disease=DOID:162!6.52e-43!235;DOID:14566!1.06e-40!239;DOID:305!9.90e-36!106;DOID:0050687!1.43e-34!143;DOID:0050686!3.12e-14!137;DOID:299!2.44e-09!25;DOID:7!1.37e-07!39;DOID:1749!2.48e-07!14 | |ontology_enrichment_disease=DOID:162!6.52e-43!235;DOID:14566!1.06e-40!239;DOID:305!9.90e-36!106;DOID:0050687!1.43e-34!143;DOID:0050686!3.12e-14!137;DOID:299!2.44e-09!25;DOID:7!1.37e-07!39;DOID:1749!2.48e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:305;1.41e-13;106!DOID:0050687;4.16e-09;143!DOID:299;9.98e-09;25!DOID:1749;2.76e-08;14!DOID:3119;5.21e-07;14!DOID:0060058;6.77e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.80e-42,106;DOID:162,5.80e-41,235;DOID:14566,2.25e-39,239;DOID:0050687,4.66e-38,143;DOID:0050686,7.10e-13,137;DOID:299,6.60e-09,25;DOID:1749,1.89e-08,14;DOID:3119,3.41e-07,14;DOID:0060058,4.20e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.06e-10!169;UBERON:0000925!7.06e-10!169;UBERON:0006595!7.06e-10!169;UBERON:0001007!4.18e-09!155;UBERON:0001555!4.18e-09!155;UBERON:0007026!4.18e-09!155;UBERON:0000077!1.45e-08!130;UBERON:0004921!2.46e-08!129;UBERON:0004185!2.46e-08!129;UBERON:0005153!2.67e-08!37;UBERON:0000065!4.40e-08!53;UBERON:0008947!1.51e-07!38;UBERON:0003258!1.51e-07!38;UBERON:0001737!2.51e-07!9;UBERON:0000072!3.24e-07!46;UBERON:0001004!3.46e-07!72;UBERON:0001557!5.93e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.42e-12;9!UBERON:0001557;3.42e-12;9!UBERON:0000072;8.23e-08;37!UBERON:0000344;5.72e-07;20!UBERON:0005911;6.59e-07;36!UBERON:0003350;7.49e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.65e-12,9;UBERON:0001557,6.90e-11,19;UBERON:0000072,1.36e-09,47;UBERON:0000065,4.77e-09,54;UBERON:0001004,4.77e-09,74;UBERON:0004119,5.07e-09,160;UBERON:0000925,5.07e-09,160;UBERON:0006595,5.07e-09,160;UBERON:0008947,5.92e-09,38;UBERON:0003258,5.92e-09,38;UBERON:0001007,6.15e-08,145;UBERON:0001555,6.15e-08,145;UBERON:0007026,6.15e-08,145;UBERON:0004921,1.20e-07,118;UBERON:0001041,1.75e-07,87;UBERON:0000344,4.78e-07,20;UBERON:0003350,6.76e-07,8 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.737201809504527,1.39560233594486,1.31064823278103,0.263766978228454,0.247532705920093,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0.85870796139317,1.23186982565596,0.502170558379211,0.61130724598361,0.903106483949403,0.787107813136792,0,0,0,1.83884244895785,0,0.369754010166788,14.2539649067755,3.55423081218554,0.587200878669695,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.590129310341499,0.786021525498329,0.411202997999018,0.501559486172034,0.32592226663359,0.473447805734733,0,0.891283655081389,0.589211814949674,1.55073726208535,0.541607727530031,0.768547918354051,0.390178042679635,0,0.276350017785848,0.869409257205157,0.14828656316206,0.267540828089713,0,0.906474741580529,0,0.34362744548263,0.506039384039006,0,0,0,0.150575119077773,0.383959833463255,0,0,0.821127996921047,0,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0.722878304769133,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.43917392846563,0.130979075497713,0,1.11235332835329,0,0,0,0.476981248610684,0,1.11437250398869,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0,0.760272105718513,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0.872188104285069,0,0.633152558322899,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0.23486899728753,0,0,0,0.368502951935304,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.150238058906597,1.02088964844019,0.538168907066586,0,0,0.600182192168805,0.515262646192195,0.257640540045629,0,0.843881661206331,1.07180705677318,1.26216887122057,0,0.161646056818812,0.710019185033229,0.705264687593482,0.508681776931463,1.15956511897978,1.90922284413584,1.72082757233402,2.5614478287215,1.59035721985782,2.78865462886844,1.86589899027667,2.27088765788066,2.91981887260664,0,0.643240938192885,0,0,0,4.49565840151407,4.88895601226495,5.06123162755312,3.74999507290139,5.66486554640256,2.60997681022206,4.1797705529651,3.53198637225623,4.61696588335668,0,0,0,0,0,0,0,1.7658523976586,5.411491295897,0,2.41450627898976,0,2.21163739305588,2.03694579348765,0,0,0,0,0,0.144366447761074,0,0,4.74122638775565,4.29243081047436,0,0,0,0.93733833986777,2.68771405118175,2.1266264586358,2.23896306757121,3.19697332365358,3.06706143332169,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0.600686115687835,0,0.224262168690721,0.43596006883328,0.66004457238855,0,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.895304816199478,0.224170287987055,0.394061520403854,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0.500170521059677,0,0,0.713715955188647,0.315404830067869,0,0,0,0,0.664225598535437,1.10621501125022,0.695068915744663,0,0,0,0.215714200818617,0.106727557803444,3.03127571446259,4.99306318531491,2.41912234663744,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.410635780069046,0,0.116210378459959,2.90062679019893,0.802025881213139,0.0920809889358963,0.918515585316854,0.364182336013434,0.131124414959424,0,0.308061348417659,0,0,0.422206515571503,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,2.41185864310528,4.44440266742331,0.256450125116389,0.328014645699706,0,0.103041011647722,0.54941678891006,0.41254749960294,2.87132768998086,0.650060246036521,0,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.214840489736547,0,0.340906509664404,0.445160178233687,0.330569830721956,0.384380134730212,2.04180339991335,0.10115778085555,0,0,0.6970372701606,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0.117812402345686,0.404364963146632,0,0,0.48763373908959,0,0,0.272999822815972,0.424216295861138,0,0.551365343546124,0,0,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0.143411352204052,0.294747123039363,0,0.709522128141196,0,0,0,0,1.44333169088268,0,0,0.282431402330337,0,0,0,1.37834040124176,0,0.764637207142375,0,0.476463550915578,0,0,0,0,1.1750647824022,3.84991942105343,3.92064345569651,3.34445715226294,2.59684583357601,9.24843963529383,3.82623054549174,0.798317485731266,0.191505370132367,0,0.649243880549111,0,0,0.313359791546046,0,1.01575066680962,0.481764225311099,0.403599414382095,0.851692475380653,0,0,0,0.166849141711909,0.390776190804081,1.11362469558097,0,0,0.33307196799782,0,1.30998378285754,0,0.606802608747567,2.89752799121444,0.284136146806413,1.67121139316383,4.15750553165694,1.84296421259539,0,0.140669416410513,0,1.15362711958732,5.27813520319984,0,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| ||
|short_description=p2@RACGAP1 | |short_description=p2@RACGAP1 | ||
}} | }} |
Latest revision as of 18:05, 18 September 2015
Short description: | p2@RACGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RACGAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000454520_5end |
EntrezGene: | RACGAP1 |
HGNC: | 9804 |
UniProt: | Q9H0H5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.07e-29 | 253 |
squamous epithelial cell | 1.13e-08 | 63 |
endodermal cell | 8.59e-08 | 58 |
epithelial cell of alimentary canal | 1.36e-07 | 20 |
endo-epithelial cell | 4.73e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.65e-12 | 9 |
upper respiratory tract | 6.90e-11 | 19 |
segment of respiratory tract | 1.36e-09 | 47 |
respiratory tract | 4.77e-09 | 54 |
respiratory system | 4.77e-09 | 74 |
endoderm-derived structure | 5.07e-09 | 160 |
endoderm | 5.07e-09 | 160 |
presumptive endoderm | 5.07e-09 | 160 |
respiratory primordium | 5.92e-09 | 38 |
endoderm of foregut | 5.92e-09 | 38 |
digestive system | 6.15e-08 | 145 |
digestive tract | 6.15e-08 | 145 |
primitive gut | 6.15e-08 | 145 |
subdivision of digestive tract | 1.20e-07 | 118 |
foregut | 1.75e-07 | 87 |
mucosa | 4.78e-07 | 20 |
epithelium of mucosa | 6.76e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.80e-42 | 106 |
cancer | 5.80e-41 | 235 |
disease of cellular proliferation | 2.25e-39 | 239 |
cell type cancer | 4.66e-38 | 143 |
organ system cancer | 7.10e-13 | 137 |
adenocarcinoma | 6.60e-09 | 25 |
squamous cell carcinoma | 1.89e-08 | 14 |
gastrointestinal system cancer | 3.41e-07 | 14 |
lymphoma | 4.20e-07 | 10 |