FFCP PHASE1:Hg19::chr10:90750982..90750999,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:90750982..90750999,-
|short_description=p4@ACTA2
|description=CAGE_peak_4_at_ACTA2_5end
|association_with_transcript=45bp_to_ENST00000458159_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=59 | |EntrezGene=59 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=130 | |HGNC=130 | ||
|TSSclassifier=strong | |||
|UniProt=F6UVQ4 | |UniProt=F6UVQ4 | ||
|association_with_transcript=45bp_to_ENST00000458159_5end | |||
|cluster_id=chr10:90750982..90750999,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_4_at_ACTA2_5end | |||
|id=chr10:90750982..90750999,- | |||
|ontology_enrichment_celltype=CL:0000055!1.84e-19!180;CL:0000183!3.26e-16!59;CL:0000187!3.04e-14!54;CL:0000680!3.51e-14!57;CL:0000056!3.51e-14!57;CL:0000355!3.51e-14!57;CL:0000393!9.77e-13!60;CL:0000211!9.77e-13!60;CL:0000192!7.07e-11!42;CL:0000514!7.07e-11!42;CL:0002371!1.90e-10!591;CL:0000220!3.33e-10!246;CL:0000222!3.45e-10!119;CL:0002321!4.33e-10!248;CL:0000057!5.84e-09!75;CL:0000144!1.58e-08!625;CL:0000359!1.38e-07!32;CL:0002494!4.54e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000187;1.93e-07;55!CL:0002494;2.51e-07;16!CL:0000192;3.25e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,7.85e-13,55;CL:0000680,1.26e-11,58;CL:0000056,1.26e-11,58;CL:0000355,1.26e-11,58;CL:0000393,1.50e-10,61;CL:0000211,1.50e-10,61;CL:0000192,1.56e-09,43;CL:0000514,1.56e-09,43;CL:0000222,7.32e-08,121;CL:0002494,1.34e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;3.25e-07;43!CL:0000355;7.72e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!6.65e-15!82;UBERON:0005256!5.34e-14!143;UBERON:0004290!6.88e-14!70;UBERON:0001134!8.52e-13!61;UBERON:0002036!8.52e-13!61;UBERON:0003082!8.52e-13!61;UBERON:0000914!8.81e-13!83;UBERON:0002329!8.81e-13!83;UBERON:0003077!8.81e-13!83;UBERON:0003059!8.81e-13!83;UBERON:0007282!8.81e-13!83;UBERON:0009618!8.81e-13!83;UBERON:0007285!8.81e-13!83;UBERON:0002100!9.68e-13!216;UBERON:0004872!9.94e-13!84;UBERON:0002385!3.92e-12!63;UBERON:0001015!3.92e-12!63;UBERON:0000383!3.92e-12!63;UBERON:0004535!7.95e-11!110;UBERON:0002049!2.05e-10!79;UBERON:0007798!2.05e-10!79;UBERON:0000490!2.25e-10!138;UBERON:0001009!2.46e-10!113;UBERON:0003914!3.56e-10!118;UBERON:0003104!3.70e-09!238;UBERON:0009142!3.70e-09!238;UBERON:0003103!7.55e-09!69;UBERON:0000475!4.34e-08!365;UBERON:0001981!8.36e-08!60;UBERON:0007500!8.36e-08!60;UBERON:0004537!8.36e-08!60;UBERON:0006965!8.36e-08!60;UBERON:0000055!8.61e-08!69;UBERON:0000119!2.07e-07!312;UBERON:0000948!2.11e-07!24;UBERON:0005498!2.11e-07!24;UBERON:0004140!2.11e-07!24;UBERON:0009881!2.11e-07!24;UBERON:0004141!2.11e-07!24;UBERON:0003084!2.11e-07!24;UBERON:0007005!2.11e-07!24;UBERON:0004139!2.11e-07!24;UBERON:0004291!2.11e-07!24;UBERON:0000481!3.05e-07!347;UBERON:0000483!3.28e-07!309;UBERON:0001008!7.05e-07!45;UBERON:0009569!7.28e-07!113;UBERON:0001637!9.28e-07!42;UBERON:0003509!9.28e-07!42;UBERON:0004572!9.28e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001801;5.46e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.53e-14,122;UBERON:0003104,3.56e-13,160;UBERON:0009142,3.56e-13,160;UBERON:0007503,7.83e-13,78;UBERON:0000486,3.22e-12,83;UBERON:0002329,3.11e-11,71;UBERON:0003059,3.11e-11,71;UBERON:0007282,3.11e-11,71;UBERON:0004290,3.11e-11,71;UBERON:0009618,3.11e-11,71;UBERON:0003077,6.41e-11,72;UBERON:0007285,6.41e-11,72;UBERON:0007524,1.29e-10,73;UBERON:0001134,3.22e-10,62;UBERON:0002036,3.22e-10,62;UBERON:0003082,3.22e-10,62;UBERON:0002385,1.37e-09,64;UBERON:0001015,1.37e-09,64;UBERON:0000383,1.37e-09,64;UBERON:0002100,2.54e-09,199;UBERON:0004535,5.50e-08,109;UBERON:0001008,1.31e-07,48;UBERON:0000490,1.34e-07,148;UBERON:0001009,1.87e-07,112;UBERON:0004872,1.90e-07,83;UBERON:0003103,3.78e-07,68;UBERON:0006554,4.76e-07,47;UBERON:0001801,4.90e-07,14;UBERON:0000019,6.09e-07,20;UBERON:0000047,6.09e-07,20;UBERON:0010312,6.09e-07,20;UBERON:0004088,6.09e-07,20;UBERON:0010230,6.09e-07,20;UBERON:0003072,6.09e-07,20;UBERON:0004128,6.09e-07,20;UBERON:0003071,6.09e-07,20;UBERON:0003914,6.92e-07,117;UBERON:0000948,7.57e-07,24;UBERON:0005498,7.57e-07,24;UBERON:0004140,7.57e-07,24;UBERON:0009881,7.57e-07,24;UBERON:0004141,7.57e-07,24;UBERON:0003084,7.57e-07,24;UBERON:0007005,7.57e-07,24;UBERON:0004139,7.57e-07,24;UBERON:0004291,7.57e-07,24;UBERON:0001013,8.35e-07,14 | |||
|phase1_expression=1.63510541343501,0.642301571672949,1.12763523276777,1.0007329835313,0.893922188854576,0,7.59899634504932,4.42203911398782,2.35067065379855,0.245733936501509,0,0.218441372130172,0,0.495065411840187,0.994192127183747,1.34465029290355,2.41077811209591,3.65155045193687,0.975865597581014,0.861847406537515,0.204000691244253,0.626909442956176,0.85870796139317,0.684372125364421,0.251085279189606,1.45185470921107,1.47781061009902,1.57421562627358,0,0,0,0.919421224478927,0.90361775633475,0.739508020333575,0.154934401160603,0.710846162437108,0.880801318004542,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0.651083453856419,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,7.31420598941885,6.03630773733273,3.83587685530591,0.361439152384566,0.50133791063589,0.144846518960824,0,0,1.32348744029695,2.66075276955077,1.40535657109002,0.261958150995425,2.91436230634034,1.11235332835329,0.324547393654683,0.870648686496336,0.132957960518865,0,0,0,0.39752481473341,0,0.694281003215189,0,0.419499436209906,0.825354125820202,1.46296476575767,0.516833518338658,0.35576626268671,0,2.41697590265488,0,0.732186172644509,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,0,0.633152558322899,0.397227542439656,1.43418310374407,1.41867352879343,0.560677600142307,1.06748995729705,0.98667019366864,1.24484414159907,1.88594940897563,2.61539044981534,2.27036141467397,0.576175924479999,1.87457145467037,0.936480230490962,1.1409436430889,2.83952493048422,1.40921398372518,0.161872944368132,0.280901613404497,1.22492502752936,0.61417158655884,0.309977343527296,0,0.494533858557114,10.0117749813183,11.4978902690598,0,0.250237039743928,0.277064115484183,0,0,0.901428353439581,1.36118619792025,3.04962380671065,1.92201649936711,0.847727604638247,2.10063767259082,2.06105058476878,0.257640540045629,1.11670113798954,0.337552664482532,0.584622030967192,0,0.552299391853796,1.77810662500693,0.710019185033229,0.705264687593482,1.18692414617341,0.57978255948989,0,0.860413786167011,0.121973706129595,0.132529768321485,0.69716365721711,1.45125477021519,0.252320850875628,0,1.56449532329816,1.28648187638577,0,0.464367928031979,0.721879481669586,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,3.69077727312324,1.40241773803446,2.8810180793198,1.47008711385542,0,0,0,0,0,0.343135620597051,1.09750285408626,2.24803506515239,0.301586917234893,1.85176890317059,2.28065813717227,3.11980435583874,1.44331342025273,0.231860809950154,3.17003474436719,0,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0,0.445893486866185,0.93733833986777,0.671928512795438,0.708875486211932,0.716468181622786,0,0,0,0.176096868026452,0,0.144119953416961,0,0,1.14596527667483,0,1.71072446022705,0.102827492703324,3.60411669412701,2.28661146104463,0.336393253036082,1.30788020649984,0.22001485746285,1.42198887333556,10.7296933755565,5.071816515336,3.19125739901845,1.04007436911366,0.514414748524284,0,1.0656887160644,1.28680194292333,1.62786481617433,2.46972101034231,3.90883421152482,1.06617584622764,3.16780749173372,1.20575750823834,0,1.89948683245908,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0.716243852959582,0,0,0,0,1.77866236955724,0,0,0.167516265334349,0,0,0,0,0.12269149171914,1.00034104211935,0.542530047399471,0.415941723061614,0.178428988797162,0,0.702848489956279,0.601892199455438,4.5481500811197,0,0,0.737476674166813,3.21469373531907,1.76221041716467,1.71571711905428,0,0,0.106727557803444,0.606255142892519,1.66435439510497,1.20956117331872,0.992431231275107,0.153461973288062,0.561320188866147,0.256278298511402,0.511707249066704,1.12597744800525,0,2.46735510084249,3.55123450626254,1.23190734020714,3.63478100428535,2.20799719073923,0,1.00253235151642,0.276242966807689,0.68888668898764,3.27764102412091,4.98272776845812,0.451199612907412,1.38627606787947,0,0,0.422206515571503,1.13733384070897,1.02056223165909,0.647747748306418,1.54227252690289,1.35473218771926,3.01013864312912,0.254876273045038,0,0.447749509444357,0.219259876645935,0,2.05160100093111,0.328014645699706,1.30151357865721,1.03041011647722,0,0.082509499920588,0,1.30012049207304,1.6068392984416,3.0934629853479,0.770243085573222,1.38153307253517,0.964856007391714,2.14840489736547,1.16013355131383,0.596586391912706,1.24644849905432,1.32227932288782,1.34533047155574,0.893288987462089,0.910420027699949,0,0.94443704049192,0,1.54016790088044,1.59691809095107,0.869932992075073,0.74129687641568,0.715624433709956,1.86079184679834,0.632758849437452,0.38126038784765,3.58256907835867,1.28381696410176,0.636406495851874,1.56989728039846,1.2591072030832,0.82361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| ||
|short_description=p4@ACTA2 | |||
}} | }} |
Latest revision as of 20:49, 19 September 2015
Short description: | p4@ACTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACTA2_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 45bp_to_ENST00000458159_5end |
EntrezGene: | ACTA2 |
HGNC: | 130 |
UniProt: | F6UVQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 7.85e-13 | 55 |
muscle precursor cell | 1.26e-11 | 58 |
myoblast | 1.26e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.26e-11 | 58 |
electrically responsive cell | 1.50e-10 | 61 |
electrically active cell | 1.50e-10 | 61 |
smooth muscle cell | 1.56e-09 | 43 |
smooth muscle myoblast | 1.56e-09 | 43 |
mesodermal cell | 7.32e-08 | 121 |
cardiocyte | 1.34e-07 | 16 |