FFCP PHASE1:Hg19::chr12:32974355..32974372,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5318 | |EntrezGene=5318 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9024 | |HGNC=9024 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=375bp_to_ENST00000549461_5end | |association_with_transcript=375bp_to_ENST00000549461_5end | ||
|cluster_id=chr12:32974355..32974372,- | |||
|coexpression_cluster_id=C380 | |||
|description=CAGE_peak_3_at_PKP2_5end | |description=CAGE_peak_3_at_PKP2_5end | ||
|id=chr12:32974355..32974372,- | |id=chr12:32974355..32974372,- | ||
|ontology_enrichment_celltype=CL:0000077!1.51e-13!19 | |ontology_enrichment_celltype=CL:0000077!1.51e-13!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.15e-25;19!CL:0002586;4.10e-16;3!CL:0000349;1.22e-12;19!CL:0000149;3.23e-12;4!CL:0002537;3.58e-10;5!CL:0002541;3.94e-08;3!CL:0000174;4.54e-08;3!CL:0002577;1.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.12e-25,19;CL:0002586,3.69e-16,3;CL:0000349,1.21e-12,19;CL:0000149,2.99e-12,4;CL:0002537,3.76e-10,5;CL:0002541,4.23e-08,3;CL:0000174,4.54e-08,3;CL:0002577,1.19e-07,3;CL:0000213,4.18e-07,58;CL:0000215,4.18e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.24e-12;4!UBERON:0007284;1.24e-12;4!UBERON:0004140;6.23e-07;1!UBERON:0010226;6.77e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;4.04e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.84e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!6.26e-15!14;UBERON:0000158!6.26e-15!14;UBERON:0003124!3.84e-11!7;UBERON:0004923!7.94e-10!57;UBERON:0000478!1.03e-08!24;UBERON:0001987!7.21e-07!4;UBERON:0004340!7.21e-07!4 | |ontology_enrichment_uberon=UBERON:0005631!6.26e-15!14;UBERON:0000158!6.26e-15!14;UBERON:0003124!3.84e-11!7;UBERON:0004923!7.94e-10!57;UBERON:0000478!1.03e-08!24;UBERON:0001987!7.21e-07!4;UBERON:0004340!7.21e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.64e-19;25!UBERON:0003978;1.14e-16;3!UBERON:0000946;1.14e-16;3!UBERON:0004151;1.87e-16;3!UBERON:0001781;4.10e-16;3!UBERON:0001782;4.10e-16;3!UBERON:0005631;3.28e-13;10!UBERON:0000158;3.28e-13;10!UBERON:0000478;1.13e-12;24!UBERON:0002133;2.11e-11;2!UBERON:0002081;2.89e-11;2!UBERON:0000948;5.79e-11;22!UBERON:0000966;7.17e-10;5!UBERON:0005388;7.17e-10;5!UBERON:0001802;7.17e-10;5!UBERON:0003124;3.94e-08;3!UBERON:0000920;3.94e-08;3!UBERON:0000305;2.19e-07;7!UBERON:0002146;5.58e-07;1!UBERON:0005623;5.58e-07;1!UBERON:0002084;6.77e-07;1!UBERON:0002082;6.77e-07;1!UBERON:0002135;9.41e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.81e-18,27;UBERON:0005631,1.74e-17,14;UBERON:0000158,1.74e-17,14;UBERON:0003978,1.30e-16,3;UBERON:0009751,1.30e-16,3;UBERON:0000946,1.30e-16,3;UBERON:0002523,1.30e-16,3;UBERON:0005983,1.30e-16,3;UBERON:0002165,1.30e-16,3;UBERON:0002062,1.30e-16,3;UBERON:0007280,1.30e-16,3;UBERON:0004151,2.19e-16,3;UBERON:0001782,3.69e-16,3;UBERON:0005424,3.69e-16,3;UBERON:0000478,1.12e-12,24;UBERON:0001781,2.99e-12,4;UBERON:0003124,4.38e-12,7;UBERON:0002133,2.41e-11,2;UBERON:0002081,3.29e-11,2;UBERON:0010227,3.29e-11,2;UBERON:0004923,1.14e-10,66;UBERON:0000948,5.77e-10,24;UBERON:0005498,5.77e-10,24;UBERON:0004140,5.77e-10,24;UBERON:0009881,5.77e-10,24;UBERON:0004141,5.77e-10,24;UBERON:0003084,5.77e-10,24;UBERON:0007005,5.77e-10,24;UBERON:0004139,5.77e-10,24;UBERON:0004291,5.77e-10,24;UBERON:0000966,2.54e-08,6;UBERON:0005388,2.54e-08,6;UBERON:0001802,2.54e-08,6;UBERON:0000920,4.23e-08,3;UBERON:0004797,2.21e-07,7;UBERON:0000305,2.26e-07,7;UBERON:0002146,5.58e-07,1;UBERON:0005623,5.58e-07,1;UBERON:0002084,6.96e-07,1;UBERON:0002082,6.96e-07,1;UBERON:0010226,6.96e-07,1;UBERON:0002135,9.67e-07,1 | |||
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| ||
|short_description=p3@PKP2 | |short_description=p3@PKP2 | ||
}} | }} |
Latest revision as of 05:16, 18 September 2015
Short description: | p3@PKP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PKP2_5end |
Coexpression cluster: | C380_heart_left_throat_skeletal_mesothelioma_aorta_Mesothelial |
Association with transcript: | 375bp_to_ENST00000549461_5end |
EntrezGene: | PKP2 |
HGNC: | 9024 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.12e-25 | 19 |
retinal pigment epithelial cell | 3.69e-16 | 3 |
extraembryonic cell | 1.21e-12 | 19 |
visual pigment cell | 2.99e-12 | 4 |
amnion mesenchymal stem cell | 3.76e-10 | 5 |
chorionic membrane mesenchymal stem cell | 4.23e-08 | 3 |
steroid hormone secreting cell | 4.54e-08 | 3 |
placental epithelial cell | 1.19e-07 | 3 |
lining cell | 4.18e-07 | 58 |
barrier cell | 4.18e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.84e-11 | 2 |