FFCP PHASE1:Hg19::chr17:42987622..42987626,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt=P14136 | |UniProt=P14136 | ||
|association_with_transcript=1bp_to_AJ306447_5end | |association_with_transcript=1bp_to_AJ306447_5end | ||
|cluster_id=chr17:42987622..42987626,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_39_at_GFAP_5end | |description=CAGE_peak_39_at_GFAP_5end | ||
|id=chr17:42987622..42987626,- | |id=chr17:42987622..42987626,- | ||
|ontology_enrichment_celltype=CL:0002605!4.71e-14!3;CL:0000128!4.68e-10!7;CL:0000126!4.68e-10!7;CL:0000127!4.68e-10!7;CL:0002453!4.68e-10!7;CL:0002319!1.09e-08!25;CL:0000047!2.10e-08!8;CL:0000540!7.91e-07!6;CL:0000031!7.91e-07!6;CL:0000404!7.91e-07!6 | |ontology_enrichment_celltype=CL:0002605!4.71e-14!3;CL:0000128!4.68e-10!7;CL:0000126!4.68e-10!7;CL:0000127!4.68e-10!7;CL:0002453!4.68e-10!7;CL:0002319!1.09e-08!25;CL:0000047!2.10e-08!8;CL:0000540!7.91e-07!6;CL:0000031!7.91e-07!6;CL:0000404!7.91e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002605;4.51e-36;3!CL:0000128;7.32e-16;7!CL:0000126;7.32e-16;7!CL:0000127;7.32e-16;7!CL:0002319;3.13e-07;25!CL:0000243;7.61e-07;15!CL:0000125;7.61e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.35e-36,3;CL:0000128,5.55e-16,7;CL:0000126,5.55e-16,7;CL:0000127,5.55e-16,7;CL:0002453,5.55e-16,7;CL:0002319,2.61e-07,25;CL:0000243,6.82e-07,15;CL:0000125,6.82e-07,15;CL:0000030,6.82e-07,15;CL:0000339,6.82e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.84e-17;3!UBERON:0003057;3.84e-17;3!UBERON:0010122;4.04e-07;2!UBERON:0006601;7.12e-07;82!CL:0000339;7.61e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.47e-121!57;UBERON:0005068!1.47e-121!57;UBERON:0006241!1.47e-121!57;UBERON:0007135!1.47e-121!57;UBERON:0001017!1.09e-107!82;UBERON:0005743!2.26e-102!86;UBERON:0002616!8.37e-100!59;UBERON:0000073!5.15e-92!94;UBERON:0001016!5.15e-92!94;UBERON:0002020!8.14e-91!34;UBERON:0003528!8.14e-91!34;UBERON:0000955!1.53e-87!69;UBERON:0006238!1.53e-87!69;UBERON:0002791!8.79e-87!33;UBERON:0002780!1.64e-85!41;UBERON:0001890!1.64e-85!41;UBERON:0006240!1.64e-85!41;UBERON:0001893!4.17e-84!34;UBERON:0003080!2.39e-83!42;UBERON:0003075!6.37e-82!86;UBERON:0007284!6.37e-82!86;UBERON:0002346!6.40e-78!90;UBERON:0001869!1.38e-76!32;UBERON:0000956!2.72e-57!25;UBERON:0000203!2.72e-57!25;UBERON:0003056!1.62e-55!61;UBERON:0000033!1.74e-48!123;UBERON:0004121!8.35e-48!169;UBERON:0000924!1.67e-46!173;UBERON:0006601!1.67e-46!173;UBERON:0000153!7.52e-46!129;UBERON:0007811!7.52e-46!129;UBERON:0002619!7.66e-46!22;UBERON:0007023!4.73e-45!115;UBERON:0001950!2.23e-44!20;UBERON:0003076!1.85e-37!15;UBERON:0003057!1.85e-37!15;UBERON:0002308!1.11e-35!9;UBERON:0000125!1.11e-35!9;UBERON:0000025!9.60e-30!194;UBERON:0002420!3.74e-28!9;UBERON:0007245!3.74e-28!9;UBERON:0010009!3.74e-28!9;UBERON:0010011!3.74e-28!9;UBERON:0000454!3.74e-28!9;UBERON:0009663!5.20e-28!7;UBERON:0004733!4.77e-26!12;UBERON:0002028!4.77e-26!12;UBERON:0007277!4.77e-26!12;UBERON:0002298!1.10e-24!8;UBERON:0004732!6.44e-24!13;UBERON:0004111!3.60e-22!241;UBERON:0001872!1.81e-19!5;UBERON:0000477!2.14e-18!286;UBERON:0001871!7.29e-18!7;UBERON:0000369!2.04e-16!4;UBERON:0002435!2.04e-16!4;UBERON:0000204!2.04e-16!4;UBERON:0010082!2.04e-16!4;UBERON:0000483!2.66e-16!309;UBERON:0000119!4.70e-16!312;UBERON:0000064!1.05e-15!219;UBERON:0002680!1.47e-15!9;UBERON:0001895!1.47e-15!9;UBERON:0010092!1.47e-15!9;UBERON:0002240!6.35e-14!3;UBERON:0006331!2.06e-13!3;UBERON:0001896!2.15e-13!3;UBERON:0005290!2.15e-13!3;UBERON:0010096!2.15e-13!3;UBERON:0002771!2.24e-13!3;UBERON:0000475!2.99e-13!365;UBERON:0005383!4.91e-13!3;UBERON:0005382!4.91e-13!3;UBERON:0000988!1.02e-12!3;UBERON:0000200!3.27e-11!6;UBERON:0001873!1.74e-09!2;UBERON:0010122!1.74e-09!2;UBERON:0001897!2.15e-09!2;UBERON:0002148!2.15e-09!2;UBERON:0009662!2.15e-09!2;UBERON:0001875!2.43e-09!2;UBERON:0006514!2.43e-09!2;UBERON:0005174!1.63e-08!5;UBERON:0001137!1.63e-08!5;UBERON:0000349!6.24e-08!5;UBERON:0000481!1.44e-07!347;UBERON:0002021!1.49e-07!5;UBERON:0000062!2.67e-07!511;UBERON:0000923!4.12e-07!604;UBERON:0005291!4.12e-07!604;UBERON:0006598!4.12e-07!604;UBERON:0002532!4.12e-07!604;UBERON:0002050!4.40e-07!605;UBERON:0005423!4.40e-07!605;UBERON:0000922!6.93e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.20e-31;34!UBERON:0002020;1.20e-31;34!UBERON:0002791;1.30e-30;32!UBERON:0001893;1.24e-28;34!UBERON:0001869;9.76e-27;32!UBERON:0000073;1.44e-26;53!UBERON:0002616;1.44e-26;53!UBERON:0002780;8.55e-25;41!UBERON:0001890;8.55e-25;41!UBERON:0000956;1.95e-21;25!UBERON:0000203;1.95e-21;25!UBERON:0000125;4.73e-21;9!UBERON:0002308;4.73e-21;9!UBERON:0002298;3.31e-18;6!UBERON:0002240;3.84e-17;3!UBERON:0005174;3.84e-17;3!UBERON:0001137;3.84e-17;3!UBERON:0001896;1.88e-16;3!UBERON:0005290;1.88e-16;3!UBERON:0009663;1.55e-15;7!UBERON:0001017;4.86e-15;75!UBERON:0000955;8.24e-15;68!UBERON:0002038;5.70e-13;1!UBERON:0009661;5.70e-13;1!UBERON:0002950;5.70e-13;1!UBERON:0001891;5.70e-13;1!UBERON:0002420;3.22e-12;9!UBERON:0007245;3.22e-12;9!UBERON:0010009;3.22e-12;9!UBERON:0010011;3.22e-12;9!UBERON:0000454;3.22e-12;9!UBERON:0001016;1.58e-10;83!UBERON:0004733;2.13e-09;12!UBERON:0002028;2.13e-09;12!UBERON:0004732;1.03e-08;13!UBERON:0000200;1.08e-08;6!UBERON:0002619;2.49e-08;22!UBERON:0002148;2.58e-07;2!UBERON:0006331;2.58e-07;2!UBERON:0009662;2.58e-07;2!UBERON:0002771;4.04e-07;2!UBERON:0001897;4.04e-07;2!UBERON:0001873;4.04e-07;2!UBERON:0001954;4.04e-07;2!UBERON:0002702;4.04e-07;2!UBERON:0001875;4.04e-07;2!UBERON:0003022;4.04e-07;2!UBERON:0002421;4.04e-07;2!UBERON:0006514;4.04e-07;2!UBERON:0010225;4.04e-07;2!UBERON:0002600;4.04e-07;2 | |||
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|short_description=p39@GFAP | |short_description=p39@GFAP | ||
}} | }} |
Latest revision as of 23:34, 24 September 2015
Short description: | p39@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 1bp_to_AJ306447_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | P14136 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.35e-36 | 3 |
oligodendrocyte | 5.55e-16 | 7 |
macroglial cell | 5.55e-16 | 7 |
astrocyte | 5.55e-16 | 7 |
oligodendrocyte precursor cell | 5.55e-16 | 7 |
neural cell | 2.61e-07 | 25 |
glial cell (sensu Vertebrata) | 6.82e-07 | 15 |
glial cell | 6.82e-07 | 15 |
glioblast | 6.82e-07 | 15 |
glioblast (sensu Vertebrata) | 6.82e-07 | 15 |