FFCP PHASE1:Hg19::chr12:125306332..125306343,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:125306332..125306343,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr12:125306332..125306343,- | |description=CAGE_peak_at_chr12:125306332..125306343,- | ||
|id=chr12:125306332..125306343,- | |id=chr12:125306332..125306343,- | ||
|ontology_enrichment_celltype=CL:0000181!2.92e-53!12;CL:0000417!2.92e-53!12;CL:0000668!2.92e-53!12;CL:0000414!2.92e-53!12;CL:0000412!2.92e-53!12;CL:0000182!2.92e-53!12;CL:0000223!1.78e-10!59 | |ontology_enrichment_celltype=CL:0000181!2.92e-53!12;CL:0000417!2.92e-53!12;CL:0000668!2.92e-53!12;CL:0000414!2.92e-53!12;CL:0000412!2.92e-53!12;CL:0000182!2.92e-53!12;CL:0000223!1.78e-10!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.35e-33;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.08e-33,12;CL:0000223,3.00e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.00e-21;11!UBERON:0009497;8.57e-18;13!UBERON:0001041;4.22e-08;30!UBERON:0003104;4.22e-08;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.92e-55!19;UBERON:0006925!1.92e-55!19;UBERON:0008836!1.92e-55!19;UBERON:0008835!8.64e-48!22;UBERON:0003894!8.64e-48!22;UBERON:0009854!1.11e-45!23;UBERON:0007499!5.70e-42!25;UBERON:0009497!5.70e-42!25;UBERON:0000015!5.70e-42!25;UBERON:0002423!5.70e-42!25;UBERON:0006235!5.70e-42!25;UBERON:0004161!5.70e-42!25;UBERON:0005057!2.50e-40!26;UBERON:0009856!2.50e-40!26;UBERON:0002365!1.06e-33!31;UBERON:0002330!1.06e-33!31;UBERON:0002368!9.21e-30!35;UBERON:0000949!5.76e-23!45;UBERON:0003929!5.39e-19!54;UBERON:0005172!1.24e-18!55;UBERON:0005173!1.24e-18!55;UBERON:0002530!2.61e-17!59;UBERON:0002417!1.03e-16!61;UBERON:0000916!1.03e-16!61;UBERON:0005911!3.41e-12!82;UBERON:0004921!4.33e-11!129;UBERON:0004185!4.33e-11!129;UBERON:0001041!4.83e-10!98;UBERON:0005177!4.10e-09!107;UBERON:0001007!5.10e-09!155;UBERON:0001555!5.10e-09!155;UBERON:0007026!5.10e-09!155;UBERON:0009569!1.41e-08!113;UBERON:0002405!2.51e-08!115;UBERON:0003914!3.61e-08!118;UBERON:0004119!3.66e-08!169;UBERON:0000925!3.66e-08!169;UBERON:0006595!3.66e-08!169;UBERON:0000466!1.39e-07!126;UBERON:0000077!2.55e-07!130;UBERON:0000490!7.80e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.22e-46;19!UBERON:0006925;1.22e-46;19!UBERON:0002423;1.53e-35;25!UBERON:0002365;8.56e-29;31!UBERON:0002330;8.56e-29;31!UBERON:0002368;7.62e-25;33!UBERON:0000949;2.39e-17;43!UBERON:0005172;1.21e-12;52!UBERON:0005173;1.21e-12;52!UBERON:0002417;1.69e-10;58!UBERON:0000916;1.69e-10;58!UBERON:0002530;1.34e-08;57!UBERON:0001007;1.73e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.12e-46,19;UBERON:0006925,1.12e-46,19;UBERON:0008836,1.12e-46,19;UBERON:0008835,2.29e-40,22;UBERON:0003894,2.29e-40,22;UBERON:0009854,1.26e-38,23;UBERON:0007499,1.44e-35,25;UBERON:0009497,1.44e-35,25;UBERON:0000015,1.44e-35,25;UBERON:0002423,1.44e-35,25;UBERON:0006235,1.44e-35,25;UBERON:0004161,1.44e-35,25;UBERON:0009856,3.26e-34,26;UBERON:0002365,9.51e-29,31;UBERON:0002330,9.51e-29,31;UBERON:0002368,1.70e-25,35;UBERON:0000949,6.90e-20,45;UBERON:0003929,1.32e-16,54;UBERON:0005172,1.32e-16,54;UBERON:0005173,1.32e-16,54;UBERON:0002530,3.25e-15,59;UBERON:0002417,5.79e-15,60;UBERON:0000916,5.79e-15,60;UBERON:0005911,5.57e-11,82;UBERON:0001041,2.36e-10,87;UBERON:0005177,6.32e-09,101;UBERON:0009569,4.74e-08,112;UBERON:0003914,1.05e-07,117;UBERON:0004921,1.41e-07,118;UBERON:0005256,2.17e-07,122 | |||
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|short_description=p@chr12:125306332..125306343,- | |short_description=p@chr12:125306332..125306343,- | ||
}} | }} |
Latest revision as of 06:28, 24 July 2015
Short description: | p@chr12:125306332..125306343, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:125306332..125306343, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.08e-33 | 12 |
endodermal cell | 3.00e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.12e-46 | 19 |
digestive gland | 1.12e-46 | 19 |
liver bud | 1.12e-46 | 19 |
hepatic diverticulum | 2.29e-40 | 22 |
liver primordium | 2.29e-40 | 22 |
digestive tract diverticulum | 1.26e-38 | 23 |
epithelial sac | 1.44e-35 | 25 |
epithelium of foregut-midgut junction | 1.44e-35 | 25 |
anatomical boundary | 1.44e-35 | 25 |
hepatobiliary system | 1.44e-35 | 25 |
foregut-midgut junction | 1.44e-35 | 25 |
septum transversum | 1.44e-35 | 25 |
sac | 3.26e-34 | 26 |
exocrine gland | 9.51e-29 | 31 |
exocrine system | 9.51e-29 | 31 |
endocrine gland | 1.70e-25 | 35 |
endocrine system | 6.90e-20 | 45 |
gut epithelium | 1.32e-16 | 54 |
abdomen element | 1.32e-16 | 54 |
abdominal segment element | 1.32e-16 | 54 |
gland | 3.25e-15 | 59 |
abdominal segment of trunk | 5.79e-15 | 60 |
abdomen | 5.79e-15 | 60 |
endo-epithelium | 5.57e-11 | 82 |
foregut | 2.36e-10 | 87 |
trunk region element | 6.32e-09 | 101 |
subdivision of trunk | 4.74e-08 | 112 |
epithelial tube | 1.05e-07 | 117 |
subdivision of digestive tract | 1.41e-07 | 118 |
trunk mesenchyme | 2.17e-07 | 122 |