FFCP PHASE1:Hg19::chr17:38633789..38633809,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38633789..38633809,+ | |||
|coexpression_cluster_id=C918 | |||
|description=CAGE_peak_at_chr17:38633789..38633809,+ | |description=CAGE_peak_at_chr17:38633789..38633809,+ | ||
|id=chr17:38633789..38633809,+ | |id=chr17:38633789..38633809,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.60e-22!254;CL:0002076!5.61e-22!43;CL:0002368!1.69e-15!13;CL:0000223!1.83e-14!59;CL:0002202!1.86e-10!9;CL:0002632!1.86e-10!9;CL:0002251!1.89e-10!21;CL:0002328!2.78e-09!3;CL:0002150!4.73e-08!3;CL:0000861!4.73e-08!3;CL:0002327!2.04e-07!4;CL:0002159!2.20e-07!13;CL:0000244!7.17e-07!4;CL:0000731!7.17e-07!4;CL:0000575!8.12e-07!2 | |ontology_enrichment_celltype=CL:0000066!2.60e-22!254;CL:0002076!5.61e-22!43;CL:0002368!1.69e-15!13;CL:0000223!1.83e-14!59;CL:0002202!1.86e-10!9;CL:0002632!1.86e-10!9;CL:0002251!1.89e-10!21;CL:0002328!2.78e-09!3;CL:0002150!4.73e-08!3;CL:0000861!4.73e-08!3;CL:0002327!2.04e-07!4;CL:0002159!2.20e-07!13;CL:0000244!7.17e-07!4;CL:0000731!7.17e-07!4;CL:0000575!8.12e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002327;7.61e-38;4!CL:0002252;8.01e-18;1!CL:0002368;4.68e-12;13!CL:0000575;1.38e-09;2!CL:0002202;2.75e-08;9!CL:0002632;2.75e-08;9!CL:0002076;5.23e-08;42!CL:0002328;8.38e-07;3!CL:0002577;8.38e-07;3!CL:0002231;8.38e-07;3!CL:0000307;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,5.23e-38,4;CL:0002252,1.22e-17,1;CL:0002368,4.96e-12,13;CL:0002076,7.77e-10,42;CL:0000575,2.02e-09,2;CL:0000066,1.64e-08,253;CL:0002202,2.55e-08,9;CL:0002632,2.55e-08,9;CL:0000223,4.03e-07,58;CL:0002577,6.50e-07,3;CL:0002328,6.88e-07,3;CL:0002231,8.62e-07,3;CL:0000068,9.12e-07,3;CL:0000069,9.12e-07,3;CL:0000307,9.12e-07,3;CL:0000377,9.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;8.38e-07;3 | |||
|ontology_enrichment_disease=DOID:305!1.96e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!2.19e-24!72;UBERON:0004119!1.39e-20!169;UBERON:0000925!1.39e-20!169;UBERON:0006595!1.39e-20!169;UBERON:0000065!5.13e-20!53;UBERON:0001737!1.12e-17!9;UBERON:0000072!1.93e-17!46;UBERON:0008947!6.91e-16!38;UBERON:0003258!6.91e-16!38;UBERON:0001557!4.79e-14!19;UBERON:0001007!8.04e-14!155;UBERON:0001555!8.04e-14!155;UBERON:0007026!8.04e-14!155;UBERON:0000077!4.47e-13!130;UBERON:0007196!3.36e-11!14;UBERON:0001558!3.36e-11!14;UBERON:0001041!5.71e-11!98;UBERON:0004921!4.67e-10!129;UBERON:0004185!4.67e-10!129;UBERON:0000161!1.91e-09!35;UBERON:0004815!2.78e-09!3;UBERON:0002031!2.78e-09!3;UBERON:0000344!5.49e-09!12;UBERON:0000365!9.58e-09!5;UBERON:0005631!2.67e-08!14;UBERON:0000158!2.67e-08!14;UBERON:0003729!3.33e-08!5;UBERON:0000166!4.14e-08!21;UBERON:0000974!4.81e-08!10;UBERON:0000064!7.51e-08!219;UBERON:0000063!2.03e-07!97;UBERON:0001911!2.04e-07!4;UBERON:0005333!2.04e-07!4;UBERON:0008425!2.04e-07!4;UBERON:0005311!2.04e-07!4;UBERON:0005910!2.79e-07!6;UBERON:0000165!3.69e-07!28;UBERON:0000930!3.69e-07!28;UBERON:0005178!3.77e-07!34;UBERON:0002224!3.77e-07!34;UBERON:0002185!4.91e-07!4;UBERON:0005181!7.01e-07!35;UBERON:0005153!7.88e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;7.61e-38;4!UBERON:0001043;8.38e-07;3!UBERON:0004815;8.38e-07;3!UBERON:0002031;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,5.23e-38,4;UBERON:0005333,5.23e-38,4;UBERON:0008425,5.23e-38,4;UBERON:0005311,5.23e-38,4;UBERON:0000076,2.13e-19,8;UBERON:0005157,1.63e-12,47;UBERON:0005153,2.60e-11,37;UBERON:0005085,7.18e-09,31;UBERON:0004815,6.88e-07,3;UBERON:0002031,6.88e-07,3;UBERON:0003100,7.95e-07,41;UBERON:0001043,9.64e-07,3;UBERON:0009143,9.64e-07,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.8072355126695,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,1.09288586487763,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.674338760312407,0.241011029883482,0.661763836394364,0.871517776369625,0.71181185733329,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,3.84125998930189,0,0.703702806881416,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.850650583454319,2.68675568108545,1.74380363108377,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81876542867756,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0.828728900423067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15699440752685,0,0.255225424989168,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,1.34060455107157,0,0,0,1.68471475667626,0.886860307073351,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.146178634172371,0.492692742319255,0.0969890164884194,0,0.677942222341597,0,0,0,0.391102765469606,0,0,0.19980960958213,0,0,0,0.432164393964449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0.6828739083758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0,0,0.0636471582781649,0,0,0.342233301085281,0.0673520530145875,0.286888821570705,0.665320713092027,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:38633789..38633809,+ | |short_description=p@chr17:38633789..38633809,+ | ||
}} | }} |
Latest revision as of 16:30, 25 July 2015
Short description: | p@chr17:38633789..38633809, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38633789..38633809, + |
Coexpression cluster: | C918_Keratinocyte_Mammary_Prostate_Urothelial_salivary_Corneal_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 5.23e-38 | 4 |
epithelial cell of esophagus | 1.22e-17 | 1 |
respiratory epithelial cell | 4.96e-12 | 13 |
endo-epithelial cell | 7.77e-10 | 42 |
corneal epithelial cell | 2.02e-09 | 2 |
epithelial cell | 1.64e-08 | 253 |
epithelial cell of tracheobronchial tree | 2.55e-08 | 9 |
epithelial cell of lower respiratory tract | 2.55e-08 | 9 |
endodermal cell | 4.03e-07 | 58 |
placental epithelial cell | 6.50e-07 | 3 |
bronchial epithelial cell | 6.88e-07 | 3 |
epithelial cell of prostate | 8.62e-07 | 3 |
duct epithelial cell | 9.12e-07 | 3 |
branched duct epithelial cell | 9.12e-07 | 3 |
tracheal epithelial cell | 9.12e-07 | 3 |
tracheoblast | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 5.23e-38 | 4 |
mammary bud | 5.23e-38 | 4 |
mammary ridge | 5.23e-38 | 4 |
mammary placode | 5.23e-38 | 4 |
external ectoderm | 2.13e-19 | 8 |
epithelial fold | 1.63e-12 | 47 |
epithelial bud | 2.60e-11 | 37 |
ectodermal placode | 7.18e-09 | 31 |
lower respiratory tract epithelium | 6.88e-07 | 3 |
epithelium of bronchus | 6.88e-07 | 3 |
female organism | 7.95e-07 | 41 |
esophagus | 9.64e-07 | 3 |
esophageal region | 9.64e-07 | 3 |