FFCP PHASE1:Hg19::chr17:25416268..25416287,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:25416268..25416287,- | |||
|description=CAGE_peak_at_chr17:25416268..25416287,- | |description=CAGE_peak_at_chr17:25416268..25416287,- | ||
|id=chr17:25416268..25416287,- | |id=chr17:25416268..25416287,- | ||
|ontology_enrichment_celltype=CL:0000066!3.22e-07!254;CL:0000082!6.13e-07!19 | |ontology_enrichment_celltype=CL:0000066!3.22e-07!254;CL:0000082!6.13e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000054;1.00e-09;2!CL:0000137;1.00e-09;2!CL:0000092;1.00e-09;2!CL:0002253;8.76e-09;2!CL:0000082;8.06e-08;19!CL:0002178;4.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,9.81e-10,2;CL:0000137,9.81e-10,2;CL:0000092,9.81e-10,2;CL:0002253,9.51e-09,2;CL:0000082,8.01e-08,19;CL:0002178,4.87e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.17e-32!235;DOID:14566!3.54e-31!239;DOID:0050687!1.83e-29!143;DOID:305!5.66e-23!106;DOID:0050686!6.53e-15!137;DOID:1325!4.22e-12!7;DOID:3904!4.22e-12!7;DOID:0050615!7.22e-11!16;DOID:5409!8.16e-10!4;DOID:1324!3.31e-09!15;DOID:299!5.70e-09!25;DOID:1036!9.81e-08!8;DOID:3119!3.48e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.83e-13;8!DOID:0050615;1.20e-12;16!DOID:1325;2.05e-10;7!DOID:3904;2.05e-10;7!DOID:1324;4.35e-10;15!DOID:200;1.00e-09;2!DOID:4305;1.00e-09;2!DOID:299;1.72e-07;25!DOID:3119;3.07e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.05e-26,235;DOID:14566,1.64e-25,239;DOID:0050687,8.68e-20,143;DOID:0050686,1.09e-14,137;DOID:1036,2.00e-13,8;DOID:305,1.18e-12,106;DOID:0050615,1.19e-12,16;DOID:1325,2.05e-10,7;DOID:3904,2.05e-10,7;DOID:1324,4.31e-10,15;DOID:200,9.81e-10,2;DOID:4305,9.81e-10,2;DOID:299,1.75e-07,25;DOID:3119,3.21e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003350!3.82e-07!5;UBERON:0004802!6.13e-07!19;UBERON:0000115!6.13e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;8.06e-08;19!UBERON:0000115;8.06e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,8.01e-08,19;UBERON:0000115,8.01e-08,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3908847515827,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34087408674291,0,0,0,0,0,0,0,10.6985648906379,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,45.3144304288306,0.0874599999961957,0,0,56.6985640152869,30.2576232662959,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.461701551022782,3.41826167541004,43.8071418337314,0,16.8403426479112,0,0,0,0,0,0,121.144869751426,92.1493911293376,87.7706899883657,14.8007911524864,0,0,0.163232808159148,1.41353071433941,1.29833183845255,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,1.50323419414493,0,0,0,0.313932918407225,0,0.284609546029793,0.416024019039416,0,0,0,0,0,0,0.219267951258557,0.0821154570532092,0,0,0,70.7136331177235,126.779922266507,0,3.32437350649165,0.721429382263803,0,72.5308882783133,0,0,0.171594997861965,0,0,0,3.94122197613481,3.55649677461933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23138781124008,0,26.175093141149,0,0,0,0,0,72.5959472986172,0,0,0,0,0.197611631897944,0,0,0,0,0,0,41.6193355063121,0,0,0,0,0,0,0,0,0,6.28023733798928,4.47005057426526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9583307040066,0,0,0,0,0,0,0,0,0.383683113910955,0,0,52.6390456085507,0,0,1.73510069962603,0,0,0,19.2136979588513,0,0,0,0,0,0,0,0,0,0,6.67404485806974,0,0,0,4.57658514560601,0,0,0,111.946313130454,0,0,0,0,0,0,0,0,0,0,0,0.879356221798103,0.127762427639595,0,0,5.46269043812968,0.91064876540519,0,0.230467975111559,0,0.339848664884159,0,0.118193840883968,0,0.078493092850514,0,0,0,98.67890918691,0,0,0,0,9.38834670433929,0,0.828864656652147,0,0,0,0,0,0.423387050190929,0,0,0,0.223710863595585,141.434486639565,0,0,0.102662806856247,0,0,98.2545746540844,0.397901550322736,0.237840181555137,0.45178432815584,49.9129946024248,222.82115710441,0,0,1.41095188908457,0,0,0,0,0,0,0,0,0,139.629179989624,27.8786948655397,0,0,0,0,0,0,0,0,0,0,0,1.38783067318587,0.218531143927391,0,0,0,0,0,0.530450887527676,1.87574891109325,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3908847515827,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34087408674291,0,0,0,0,0,0,0,10.6985648906379,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,45.3144304288306,0.0874599999961957,0,0,56.6985640152869,30.2576232662959,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.461701551022782,3.41826167541004,43.8071418337314,0,16.8403426479112,0,0,0,0,0,0,121.144869751426,92.1493911293376,87.7706899883657,14.8007911524864,0,0,0.163232808159148,1.41353071433941,1.29833183845255,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,1.50323419414493,0,0,0,0.313932918407225,0,0.284609546029793,0.416024019039416,0,0,0,0,0,0,0.219267951258557,0.0821154570532092,0,0,0,70.7136331177235,126.779922266507,0,3.32437350649165,0.721429382263803,0,72.5308882783133,0,0,0.171594997861965,0,0,0,3.94122197613481,3.55649677461933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23138781124008,0,26.175093141149,0,0,0,0,0,72.5959472986172,0,0,0,0,0.197611631897944,0,0,0,0,0,0,41.6193355063121,0,0,0,0,0,0,0,0,0,6.28023733798928,4.47005057426526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9583307040066,0,0,0,0,0,0,0,0,0.383683113910955,0,0,52.6390456085507,0,0,1.73510069962603,0,0,0,19.2136979588513,0,0,0,0,0,0,0,0,0,0,6.67404485806974,0,0,0,4.57658514560601,0,0,0,111.946313130454,0,0,0,0,0,0,0,0,0,0,0,0.879356221798103,0.127762427639595,0,0,5.46269043812968,0.91064876540519,0,0.230467975111559,0,0.339848664884159,0,0.118193840883968,0,0.078493092850514,0,0,0,98.67890918691,0,0,0,0,9.38834670433929,0,0.828864656652147,0,0,0,0,0,0.423387050190929,0,0,0,0.223710863595585,141.434486639565,0,0,0.102662806856247,0,0,98.2545746540844,0.397901550322736,0.237840181555137,0.45178432815584,49.9129946024248,222.82115710441,0,0,1.41095188908457,0,0,0,0,0,0,0,0,0,139.629179989624,27.8786948655397,0,0,0,0,0,0,0,0,0,0,0,1.38783067318587,0.218531143927391,0,0,0,0,0,0.530450887527676,1.87574891109325,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:25416268..25416287,- | |short_description=p@chr17:25416268..25416287,- | ||
}} | }} |
Latest revision as of 14:48, 25 July 2015
Short description: | p@chr17:25416268..25416287, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:25416268..25416287, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 9.81e-10 | 2 |
osteocyte | 9.81e-10 | 2 |
osteoclast | 9.81e-10 | 2 |
epithelial cell of large intestine | 9.51e-09 | 2 |
epithelial cell of lung | 8.01e-08 | 19 |
epithelial cell of stomach | 4.87e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 8.01e-08 | 19 |
lung epithelium | 8.01e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.05e-26 | 235 |
disease of cellular proliferation | 1.64e-25 | 239 |
cell type cancer | 8.68e-20 | 143 |
organ system cancer | 1.09e-14 | 137 |
chronic leukemia | 2.00e-13 | 8 |
carcinoma | 1.18e-12 | 106 |
respiratory system cancer | 1.19e-12 | 16 |
bronchus cancer | 2.05e-10 | 7 |
bronchogenic carcinoma | 2.05e-10 | 7 |
lung cancer | 4.31e-10 | 15 |
giant cell tumor | 9.81e-10 | 2 |
bone giant cell tumor | 9.81e-10 | 2 |
adenocarcinoma | 1.75e-07 | 25 |
gastrointestinal system cancer | 3.21e-07 | 14 |