FFCP PHASE1:Hg19::chr12:100867777..100867788,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9971 | |EntrezGene=9971 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7967 | |HGNC=7967 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1M1 | |UniProt=F8W1M1 | ||
|association_with_transcript=44bp_to_ENST00000546380_5end | |association_with_transcript=44bp_to_ENST00000546380_5end | ||
|cluster_id=chr12:100867777..100867788,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_NR1H4_5end | |description=CAGE_peak_5_at_NR1H4_5end | ||
|id=chr12:100867777..100867788,+ | |id=chr12:100867777..100867788,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.55e-19!12;CL:0000417!2.55e-19!12;CL:0000668!2.55e-19!12;CL:0000414!2.55e-19!12;CL:0000412!2.55e-19!12;CL:0000182!2.55e-19!12;CL:0002195!4.35e-11!2;CL:0002571!4.35e-11!2;CL:0002622!4.97e-07!3 | |ontology_enrichment_celltype=CL:0000181!2.55e-19!12;CL:0000417!2.55e-19!12;CL:0000668!2.55e-19!12;CL:0000414!2.55e-19!12;CL:0000412!2.55e-19!12;CL:0000182!2.55e-19!12;CL:0002195!4.35e-11!2;CL:0002571!4.35e-11!2;CL:0002622!4.97e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.24e-53;12!CL:0002195;4.73e-28;2!CL:0002571;4.73e-28;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.14e-53,12;CL:0002195,4.13e-28,2;CL:0002571,4.13e-28,2;CL:0000223,9.57e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.23e-43;11!UBERON:0009497;3.58e-36;13!UBERON:0006242;2.94e-14;1!UBERON:0003104;3.28e-14;31!UBERON:0001041;4.64e-11;30!CL:0000223;1.20e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.00e-29!19;UBERON:0006925!3.00e-29!19;UBERON:0008836!3.00e-29!19;UBERON:0009497!8.10e-26!25;UBERON:0000015!8.10e-26!25;UBERON:0002423!8.10e-26!25;UBERON:0006235!8.10e-26!25;UBERON:0004161!8.10e-26!25;UBERON:0008835!6.12e-25!22;UBERON:0003894!6.12e-25!22;UBERON:0009854!9.40e-24!23;UBERON:0007499!1.15e-21!25;UBERON:0005057!9.66e-21!26;UBERON:0009856!9.66e-21!26;UBERON:0002368!1.03e-20!35;UBERON:0003929!4.62e-19!54;UBERON:0002530!3.81e-17!59;UBERON:0002365!5.11e-17!31;UBERON:0002330!5.11e-17!31;UBERON:0005172!2.52e-16!55;UBERON:0005173!2.52e-16!55;UBERON:0000949!1.84e-15!45;UBERON:0005911!1.28e-14!82;UBERON:0002417!2.21e-14!61;UBERON:0000916!2.21e-14!61;UBERON:0004921!4.43e-11!129;UBERON:0004185!4.43e-11!129;UBERON:0000488!1.48e-10!4;UBERON:0001007!1.66e-09!155;UBERON:0001555!1.66e-09!155;UBERON:0007026!1.66e-09!155;UBERON:0000490!4.62e-09!138;UBERON:0005177!5.19e-09!107;UBERON:0000481!9.40e-09!347;UBERON:0001048!1.94e-08!168;UBERON:0009569!2.46e-08!113;UBERON:0004119!2.54e-08!169;UBERON:0000925!2.54e-08!169;UBERON:0006595!2.54e-08!169;UBERON:0000483!3.14e-08!309;UBERON:0000119!4.38e-08!312;UBERON:0000077!1.03e-07!130;UBERON:0005256!1.26e-07!143;UBERON:0000475!3.23e-07!365;UBERON:0002203!3.45e-07!6;UBERON:0001768!3.45e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.78e-83;19!UBERON:0006925;4.78e-83;19!UBERON:0002423;1.05e-74;25!UBERON:0002365;1.63e-49;31!UBERON:0002330;1.63e-49;31!UBERON:0002368;2.48e-44;33!UBERON:0000949;1.26e-30;43!UBERON:0005172;2.76e-25;52!UBERON:0005173;2.76e-25;52!UBERON:0002530;1.17e-17;57!UBERON:0002417;9.21e-16;58!UBERON:0000916;9.21e-16;58!UBERON:0001007;3.95e-10;81!UBERON:0009569;7.25e-08;110 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.93e-83,19;UBERON:0006925,3.93e-83,19;UBERON:0008836,3.93e-83,19;UBERON:0009497,9.20e-75,25;UBERON:0000015,9.20e-75,25;UBERON:0002423,9.20e-75,25;UBERON:0006235,9.20e-75,25;UBERON:0004161,9.20e-75,25;UBERON:0008835,1.13e-71,22;UBERON:0003894,1.13e-71,22;UBERON:0009854,1.62e-68,23;UBERON:0007499,5.82e-63,25;UBERON:0009856,1.67e-60,26;UBERON:0002365,1.37e-50,31;UBERON:0002330,1.37e-50,31;UBERON:0002368,1.08e-44,35;UBERON:0000949,1.58e-34,45;UBERON:0003929,5.11e-34,54;UBERON:0005172,5.11e-34,54;UBERON:0005173,5.11e-34,54;UBERON:0002417,1.70e-30,60;UBERON:0000916,1.70e-30,60;UBERON:0002530,4.50e-26,59;UBERON:0005911,5.59e-22,82;UBERON:0005177,1.35e-17,101;UBERON:0001041,2.66e-17,87;UBERON:0009569,9.77e-16,112;UBERON:0003914,5.26e-15,117;UBERON:0005256,2.47e-14,122;UBERON:0001048,1.44e-12,160;UBERON:0004921,2.61e-12,118;UBERON:0001007,9.57e-12,145;UBERON:0001555,9.57e-12,145;UBERON:0007026,9.57e-12,145;UBERON:0000490,1.44e-11,148;UBERON:0003104,1.37e-10,160;UBERON:0009142,1.37e-10,160;UBERON:0004119,1.62e-10,160;UBERON:0000925,1.62e-10,160;UBERON:0006595,1.62e-10,160;UBERON:0000025,1.59e-08,192;UBERON:0002100,3.19e-08,199 | |||
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|short_description=p5@NR1H4 | |short_description=p5@NR1H4 | ||
}} | }} |
Latest revision as of 07:25, 25 September 2015
Short description: | p5@NR1H4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NR1H4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 44bp_to_ENST00000546380_5end |
EntrezGene: | NR1H4 |
HGNC: | 7967 |
UniProt: | F8W1M1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.14e-53 | 12 |
hepatic stem cell | 4.13e-28 | 2 |
hepatic mesenchymal stem cell | 4.13e-28 | 2 |
endodermal cell | 9.57e-11 | 58 |