FFCP PHASE1:Mm9::chr9:106051023..106051043,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=387153 | |EntrezGene=387153 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENSMUST00000143956,uc009riy.1_5end | |association_with_transcript=5bp_to_ENSMUST00000143956,uc009riy.1_5end | ||
|cluster_id=chr9:106051023..106051043,+ | |||
|description=CAGE_peak_1_at_Mir135a-1_5end | |description=CAGE_peak_1_at_Mir135a-1_5end | ||
|id=chr9:106051023..106051043,+ | |id=chr9:106051023..106051043,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.23e-17!33;CL:0000047!1.23e-17!33;CL:0000031!1.23e-17!33;CL:0000404!1.23e-17!33;CL:0000393!3.09e-13!39;CL:0000211!3.09e-13!39;CL:0000117!1.59e-11!23;CL:0000337!1.59e-11!23;CL:0000221!2.92e-11!44;CL:0000133!2.92e-11!44;CL:0002319!4.86e-11!43;CL:0000055!3.91e-08!50;CL:0000107!4.97e-07!9 | |ontology_enrichment_celltype=CL:0000540!1.23e-17!33;CL:0000047!1.23e-17!33;CL:0000031!1.23e-17!33;CL:0000404!1.23e-17!33;CL:0000393!3.09e-13!39;CL:0000211!3.09e-13!39;CL:0000117!1.59e-11!23;CL:0000337!1.59e-11!23;CL:0000221!2.92e-11!44;CL:0000133!2.92e-11!44;CL:0002319!4.86e-11!43;CL:0000055!3.91e-08!50;CL:0000107!4.97e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.94e-18,33;CL:0000047,6.94e-18,33;CL:0000031,6.94e-18,33;CL:0000404,6.94e-18,33;CL:0000393,2.04e-14,39;CL:0000211,2.04e-14,39;CL:0002319,1.19e-12,43;CL:0000221,2.93e-12,44;CL:0000133,2.93e-12,44;CL:0000107,2.61e-11,9;CL:0000117,1.15e-09,23;CL:0000337,1.15e-09,23;CL:0002613,3.81e-08,3;CL:0002608,1.93e-07,3;CL:0000120,2.85e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.01e-19!102;UBERON:0000924!3.01e-19!102;UBERON:0006601!3.01e-19!102;UBERON:0003056!7.27e-19!49;UBERON:0001017!2.07e-17!73;UBERON:0005743!2.07e-17!73;UBERON:0000073!1.75e-16!75;UBERON:0001016!1.75e-16!75;UBERON:0000033!1.33e-15!63;UBERON:0002346!5.25e-15!71;UBERON:0003075!5.25e-15!71;UBERON:0007284!5.25e-15!71;UBERON:0002780!3.63e-13!39;UBERON:0001890!3.63e-13!39;UBERON:0006240!3.63e-13!39;UBERON:0003080!1.42e-12!40;UBERON:0002020!2.91e-12!34;UBERON:0001049!9.01e-11!52;UBERON:0005068!9.01e-11!52;UBERON:0006241!9.01e-11!52;UBERON:0007135!9.01e-11!52;UBERON:0002791!1.18e-10!29;UBERON:0003528!1.18e-10!29;UBERON:0001893!1.18e-10!29;UBERON:0000955!2.58e-10!50;UBERON:0006238!2.58e-10!50;UBERON:0002616!8.00e-10!49;UBERON:0000970!6.04e-08!9;UBERON:0000019!6.04e-08!9;UBERON:0000047!6.04e-08!9;UBERON:0004088!6.04e-08!9;UBERON:0002104!6.04e-08!9;UBERON:0001456!6.04e-08!9;UBERON:0003072!6.04e-08!9;UBERON:0003071!6.04e-08!9;UBERON:0004128!6.04e-08!9;UBERON:0007811!1.07e-07!86;UBERON:0002420!1.65e-07!8;UBERON:0007245!1.65e-07!8;UBERON:0010009!1.65e-07!8;UBERON:0010011!1.65e-07!8;UBERON:0000454!1.65e-07!8;UBERON:0000020!2.77e-07!12;UBERON:0001032!2.77e-07!12;UBERON:0004456!2.77e-07!12;UBERON:0002410!4.97e-07!9;UBERON:0000153!6.19e-07!94 | |ontology_enrichment_uberon=UBERON:0004121!3.01e-19!102;UBERON:0000924!3.01e-19!102;UBERON:0006601!3.01e-19!102;UBERON:0003056!7.27e-19!49;UBERON:0001017!2.07e-17!73;UBERON:0005743!2.07e-17!73;UBERON:0000073!1.75e-16!75;UBERON:0001016!1.75e-16!75;UBERON:0000033!1.33e-15!63;UBERON:0002346!5.25e-15!71;UBERON:0003075!5.25e-15!71;UBERON:0007284!5.25e-15!71;UBERON:0002780!3.63e-13!39;UBERON:0001890!3.63e-13!39;UBERON:0006240!3.63e-13!39;UBERON:0003080!1.42e-12!40;UBERON:0002020!2.91e-12!34;UBERON:0001049!9.01e-11!52;UBERON:0005068!9.01e-11!52;UBERON:0006241!9.01e-11!52;UBERON:0007135!9.01e-11!52;UBERON:0002791!1.18e-10!29;UBERON:0003528!1.18e-10!29;UBERON:0001893!1.18e-10!29;UBERON:0000955!2.58e-10!50;UBERON:0006238!2.58e-10!50;UBERON:0002616!8.00e-10!49;UBERON:0000970!6.04e-08!9;UBERON:0000019!6.04e-08!9;UBERON:0000047!6.04e-08!9;UBERON:0004088!6.04e-08!9;UBERON:0002104!6.04e-08!9;UBERON:0001456!6.04e-08!9;UBERON:0003072!6.04e-08!9;UBERON:0003071!6.04e-08!9;UBERON:0004128!6.04e-08!9;UBERON:0007811!1.07e-07!86;UBERON:0002420!1.65e-07!8;UBERON:0007245!1.65e-07!8;UBERON:0010009!1.65e-07!8;UBERON:0010011!1.65e-07!8;UBERON:0000454!1.65e-07!8;UBERON:0000020!2.77e-07!12;UBERON:0001032!2.77e-07!12;UBERON:0004456!2.77e-07!12;UBERON:0002410!4.97e-07!9;UBERON:0000153!6.19e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.31e-23,95;UBERON:0000924,5.31e-23,95;UBERON:0006601,5.31e-23,95;UBERON:0003056,8.94e-23,49;UBERON:0002346,5.62e-21,64;UBERON:0003075,5.62e-21,64;UBERON:0007284,5.62e-21,64;UBERON:0001017,6.96e-20,73;UBERON:0001016,3.71e-19,75;UBERON:0010371,1.62e-17,73;UBERON:0002780,3.19e-15,39;UBERON:0001890,3.19e-15,39;UBERON:0006240,3.19e-15,39;UBERON:0003080,1.01e-14,40;UBERON:0003528,3.44e-13,29;UBERON:0002791,3.44e-13,29;UBERON:0001893,3.44e-13,29;UBERON:0010314,1.88e-12,92;UBERON:0002020,1.91e-12,34;UBERON:0002616,3.43e-12,46;UBERON:0000369,4.87e-12,5;UBERON:0002435,4.87e-12,5;UBERON:0000204,4.87e-12,5;UBERON:0010082,4.87e-12,5;UBERON:0000955,7.83e-12,47;UBERON:0006238,7.83e-12,47;UBERON:0001049,1.23e-11,52;UBERON:0005068,1.23e-11,52;UBERON:0006241,1.23e-11,52;UBERON:0007135,1.23e-11,52;UBERON:0002410,2.61e-11,9;UBERON:0000073,5.02e-11,54;UBERON:0000970,6.47e-10,9;UBERON:0000019,6.47e-10,9;UBERON:0000047,6.47e-10,9;UBERON:0010312,6.47e-10,9;UBERON:0004088,6.47e-10,9;UBERON:0002104,6.47e-10,9;UBERON:0001456,6.47e-10,9;UBERON:0003072,6.47e-10,9;UBERON:0004128,6.47e-10,9;UBERON:0003071,6.47e-10,9;UBERON:0002420,7.67e-10,8;UBERON:0007245,7.67e-10,8;UBERON:0010009,7.67e-10,8;UBERON:0010011,7.67e-10,8;UBERON:0000454,7.67e-10,8;UBERON:0000010,4.85e-09,11;UBERON:0001444,6.26e-08,11;UBERON:0000020,3.47e-07,12;UBERON:0001032,3.47e-07,12;UBERON:0004456,3.47e-07,12;UBERON:0000011,4.00e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,5.28990979272033,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0,0,0.441737081903227,2.44981598429908,2.87536413054709,3.67687514644008,0,0.127687338085188,0.46081959976873,5.93488294785872,5.03182039813253,6.25096044668112,0.279182999001381,1.12552522006336,0.45839474333043,0.589257170947335,0.569486723196412,2.60959224155421,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83000241127451,5.52879149296603,1.39059456153821,0.511430914660661,0,0.324482526135515,0.101839363850316,0,0,1.89397670297827,1.43132487258974,0.689706313300419,1.80062129805349,1.05493372485001,1.42876648217788,1.66547836370305,0.655912071918102,1.55222022443409,0,0.378212160335639,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23485534855141,0,0,0.213288250535234,0,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0.38992817423824,0,0,0,0,0.228497025219458,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89304931649754,0,3.23135096599198,1.91175038362042,2.45078541490634,1.98153571552183,0.809621403349789,3.21481443702443,4.34816555741176,0.642642632843614,0,0.178065603667255,0,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,3.24109969256358,7.37344497561701,1.07168517515796,1.24138163549592,0.891844088010353,0.493647061806363,0,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.328281799490123,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.540026704109006,0.209088296014469,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0.515559547031063,2.05524755931193,1.5107877947794,0,1.35096360967266,0.453142408984205,0,1.55681021376265,4.38927360741134,4.60980735536162,0.243106717068294,0.628839487883947,0,1.11123363900808,0.206035057238894,0,0.758091635291392,1.52087579934144,0.565879024158229,0.468207537349412,0.512201219238954,0.689225627467359,0,0.347652977834566,0,0,0.588795680537589,0,0,0.476872379894642,0.872078499793971,1.12931256498397,0.592302255241736,0.365855945745545,0.263069711437843,0.407412341537585,0,0.949080144993393,0.394017929502254,0,0.464810523557898,0.385813221962283,1.24905288968973,0.233931608445408,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,5.28990979272033,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0,0,0.441737081903227,2.44981598429908,2.87536413054709,3.67687514644008,0,0.127687338085188,0.46081959976873,5.93488294785872,5.03182039813253,6.25096044668112,0.279182999001381,1.12552522006336,0.45839474333043,0.589257170947335,0.569486723196412,2.60959224155421,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83000241127451,5.52879149296603,1.39059456153821,0.511430914660661,0,0.324482526135515,0.101839363850316,0,0,1.89397670297827,1.43132487258974,0.689706313300419,1.80062129805349,1.05493372485001,1.42876648217788,1.66547836370305,0.655912071918102,1.55222022443409,0,0.378212160335639,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23485534855141,0,0,0.213288250535234,0,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0.38992817423824,0,0,0,0,0.228497025219458,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89304931649754,0,3.23135096599198,1.91175038362042,2.45078541490634,1.98153571552183,0.809621403349789,3.21481443702443,4.34816555741176,0.642642632843614,0,0.178065603667255,0,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,3.24109969256358,7.37344497561701,1.07168517515796,1.24138163549592,0.891844088010353,0.493647061806363,0,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.328281799490123,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.540026704109006,0.209088296014469,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0.515559547031063,2.05524755931193,1.5107877947794,0,1.35096360967266,0.453142408984205,0,1.55681021376265,4.38927360741134,4.60980735536162,0.243106717068294,0.628839487883947,0,1.11123363900808,0.206035057238894,0,0.758091635291392,1.52087579934144,0.565879024158229,0.468207537349412,0.512201219238954,0.689225627467359,0,0.347652977834566,0,0,0.588795680537589,0,0,0.476872379894642,0.872078499793971,1.12931256498397,0.592302255241736,0.365855945745545,0.263069711437843,0.407412341537585,0,0.949080144993393,0.394017929502254,0,0.464810523557898,0.385813221962283,1.24905288968973,0.233931608445408,0,0,0,0 | ||
|short_description=p1@Mir135a-1 | |short_description=p1@Mir135a-1 | ||
}} | }} |
Latest revision as of 02:40, 26 September 2015
Short description: | p1@Mir135a-1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mir135a-1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 5bp_to_ENSMUST00000143956, uc009riy.1_5end |
EntrezGene: | Mir135a-1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.94e-18 | 33 |
neuronal stem cell | 6.94e-18 | 33 |
neuroblast | 6.94e-18 | 33 |
electrically signaling cell | 6.94e-18 | 33 |
electrically responsive cell | 2.04e-14 | 39 |
electrically active cell | 2.04e-14 | 39 |
neural cell | 1.19e-12 | 43 |
ectodermal cell | 2.93e-12 | 44 |
neurectodermal cell | 2.93e-12 | 44 |
autonomic neuron | 2.61e-11 | 9 |
CNS neuron (sensu Vertebrata) | 1.15e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-09 | 23 |
striatum neuron | 3.81e-08 | 3 |
hippocampal neuron | 1.93e-07 | 3 |
granule cell | 2.85e-07 | 3 |