FFCP PHASE1:Hg19::chr11:67442013..67442036,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222 | |EntrezGene=222 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=411 | |HGNC=411 | ||
|TSSclassifier=strong | |||
|UniProt=P48448 | |UniProt=P48448 | ||
|association_with_transcript=65bp_to_ENST00000349015,NM_000695,uc001omr.2,uc009ysa.1_5end | |association_with_transcript=65bp_to_ENST00000349015,NM_000695,uc001omr.2,uc009ysa.1_5end | ||
|cluster_id=chr11:67442013..67442036,- | |||
|coexpression_cluster_id=C3197 | |||
|description=CAGE_peak_3_at_ALDH3B2_5end | |description=CAGE_peak_3_at_ALDH3B2_5end | ||
|id=chr11:67442013..67442036,- | |id=chr11:67442013..67442036,- | ||
|ontology_enrichment_celltype=CL:0002076!3.46e-28!43;CL:0000223!4.29e-20!59;CL:0002368!1.63e-17!13;CL:0000066!2.60e-14!254;CL:0002251!6.30e-14!21;CL:0000622!8.65e-12!5;CL:0002202!4.03e-11!9;CL:0002632!4.03e-11!9;CL:0002159!7.03e-10!13;CL:0000154!9.87e-10!6;CL:0002623!9.83e-08!3;CL:0002328!1.82e-07!3;CL:0000068!3.47e-07!3;CL:0000069!3.47e-07!3;CL:0000307!3.47e-07!3;CL:0000377!3.47e-07!3;CL:0000362!6.02e-07!8 | |ontology_enrichment_celltype=CL:0002076!3.46e-28!43;CL:0000223!4.29e-20!59;CL:0002368!1.63e-17!13;CL:0000066!2.60e-14!254;CL:0002251!6.30e-14!21;CL:0000622!8.65e-12!5;CL:0002202!4.03e-11!9;CL:0002632!4.03e-11!9;CL:0002159!7.03e-10!13;CL:0000154!9.87e-10!6;CL:0002623!9.83e-08!3;CL:0002328!1.82e-07!3;CL:0000068!3.47e-07!3;CL:0000069!3.47e-07!3;CL:0000307!3.47e-07!3;CL:0000377!3.47e-07!3;CL:0000362!6.02e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000622;3.35e-21;5!CL:0000154;1.24e-17;6!CL:0002623;1.77e-13;3!CL:0000307;1.95e-12;3!CL:0000150;1.14e-11;9!CL:0002076;1.40e-11;42!CL:0002202;3.30e-11;9!CL:0002632;3.30e-11;9!CL:0002368;7.85e-11;13!CL:0002159;1.72e-10;14!CL:0000575;5.21e-10;2!CL:0000317;1.83e-09;2!CL:1000448;1.83e-09;2!CL:0002308;1.83e-09;2!CL:0002140;1.83e-09;2!CL:0002251;2.34e-09;20!CL:0000362;1.25e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,3.28e-21,5;CL:0000154,1.22e-17,6;CL:0002076,4.23e-16,42;CL:0002623,2.02e-13,3;CL:0000223,1.61e-12,58;CL:0000068,2.24e-12,3;CL:0000069,2.24e-12,3;CL:0000307,2.24e-12,3;CL:0000377,2.24e-12,3;CL:0000150,1.13e-11,9;CL:0002202,3.73e-11,9;CL:0002632,3.73e-11,9;CL:0002368,8.22e-11,13;CL:0002159,1.58e-10,14;CL:0000575,5.32e-10,2;CL:0000066,1.01e-09,253;CL:0000317,1.58e-09,2;CL:1000448,1.58e-09,2;CL:0002308,1.58e-09,2;CL:0002140,1.58e-09,2;CL:0002251,2.59e-09,20;CL:0000362,1.14e-07,9;CL:0002077,6.89e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000377;1.95e-12;3!CL:0000223;5.59e-08;58 | |||
|ontology_enrichment_disease=DOID:5093!4.90e-10!4;DOID:1612!4.90e-10!4 | |ontology_enrichment_disease=DOID:5093!4.90e-10!4;DOID:1612!4.90e-10!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;8.08e-18;4!DOID:1612;8.08e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.74e-18,4;DOID:1612,7.74e-18,4 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.55e-24!72;UBERON:0000166!1.53e-17!21;UBERON:0004119!2.58e-17!169;UBERON:0000925!2.58e-17!169;UBERON:0006595!2.58e-17!169;UBERON:0000065!1.50e-14!53;UBERON:0000165!3.73e-14!28;UBERON:0000930!3.73e-14!28;UBERON:0000161!1.08e-13!35;UBERON:0001044!1.37e-13!6;UBERON:0003293!1.37e-13!6;UBERON:0003294!1.37e-13!6;UBERON:0010047!1.37e-13!6;UBERON:0000167!1.37e-13!6;UBERON:0003408!4.02e-13!10;UBERON:0000915!7.43e-13!52;UBERON:0007196!6.00e-11!14;UBERON:0001558!6.00e-11!14;UBERON:0000078!9.97e-11!18;UBERON:0001007!1.02e-10!155;UBERON:0001555!1.02e-10!155;UBERON:0007026!1.02e-10!155;UBERON:0003102!1.69e-10!95;UBERON:0005178!1.71e-10!34;UBERON:0002224!1.71e-10!34;UBERON:0001041!1.84e-10!98;UBERON:0000077!2.68e-10!130;UBERON:0000464!4.28e-10!104;UBERON:0005181!4.36e-10!35;UBERON:0004921!1.56e-09!129;UBERON:0004185!1.56e-09!129;UBERON:0001444!4.34e-09!48;UBERON:0000072!4.45e-09!46;UBERON:0002185!5.46e-09!4;UBERON:0000974!5.56e-09!10;UBERON:0006562!1.18e-08!11;UBERON:0000310!8.76e-08!10;UBERON:0000466!1.07e-07!126;UBERON:0000475!1.10e-07!365;UBERON:0004815!1.82e-07!3;UBERON:0002031!1.82e-07!3;UBERON:0001042!3.12e-07!10;UBERON:0009145!3.12e-07!10;UBERON:0001723!3.39e-07!3;UBERON:0001033!3.39e-07!3;UBERON:0010056!3.39e-07!3;UBERON:0001443!5.40e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;8.43e-25;6!UBERON:0003293;8.43e-25;6!UBERON:0003294;8.43e-25;6!UBERON:0010047;8.43e-25;6!UBERON:0003408;8.43e-25;6!UBERON:0000167;8.43e-25;6!UBERON:0000165;4.83e-19;28!UBERON:0001041;1.93e-18;14!UBERON:0000161;2.43e-16;19!UBERON:0000166;2.43e-16;19!UBERON:0000310;1.57e-10;10!UBERON:0007811;4.54e-10;52!UBERON:0002365;1.04e-09;31!UBERON:0002330;1.04e-09;31!UBERON:0001443;1.52e-09;11!UBERON:0002419;1.83e-09;2!UBERON:0007771;1.83e-09;2!UBERON:0003297;1.83e-09;2!UBERON:0001821;1.83e-09;2!UBERON:0003487;1.83e-09;2!UBERON:0001820;1.83e-09;2!UBERON:0003126;2.48e-09;7!UBERON:0001005;2.48e-09;7!UBERON:0007196;2.62e-09;15!UBERON:0001558;2.62e-09;15!UBERON:0001829;2.80e-09;2!UBERON:0000153;4.58e-09;54!UBERON:0000033;4.71e-09;50!UBERON:0001444;5.55e-08;48!UBERON:0004921;1.02e-07;33!UBERON:0000915;1.66e-07;52!UBERON:0001043;4.66e-07;3!UBERON:0001003;6.51e-07;15!UBERON:0007376;6.51e-07;15!UBERON:0001723;9.20e-07;3!UBERON:0001033;9.20e-07;3!UBERON:0001555;9.90e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.11e-24,6;UBERON:0003293,1.11e-24,6;UBERON:0003294,1.11e-24,6;UBERON:0010047,1.11e-24,6;UBERON:0000167,1.11e-24,6;UBERON:0000166,5.82e-21,22;UBERON:0000165,3.19e-18,29;UBERON:0000930,3.19e-18,29;UBERON:0003408,1.40e-14,10;UBERON:0000161,2.82e-14,36;UBERON:0001004,5.95e-14,74;UBERON:0003102,8.16e-14,99;UBERON:0001444,9.92e-14,49;UBERON:0000153,6.56e-12,62;UBERON:0007811,6.56e-12,62;UBERON:0000033,1.25e-11,56;UBERON:0000915,6.69e-11,52;UBERON:0000310,1.48e-10,10;UBERON:0001041,4.58e-10,87;UBERON:0001443,1.44e-09,11;UBERON:0002365,1.57e-09,31;UBERON:0002330,1.57e-09,31;UBERON:0002419,1.58e-09,2;UBERON:0007771,1.58e-09,2;UBERON:0003297,1.58e-09,2;UBERON:0001821,1.58e-09,2;UBERON:0003487,1.58e-09,2;UBERON:0001820,1.58e-09,2;UBERON:0005089,1.58e-09,2;UBERON:0005088,1.58e-09,2;UBERON:0004119,2.33e-09,160;UBERON:0000925,2.33e-09,160;UBERON:0006595,2.33e-09,160;UBERON:0003126,2.75e-09,7;UBERON:0001005,2.75e-09,7;UBERON:0001829,2.86e-09,2;UBERON:0007196,2.90e-09,15;UBERON:0001558,2.90e-09,15;UBERON:0001007,1.09e-07,145;UBERON:0001555,1.09e-07,145;UBERON:0007026,1.09e-07,145;UBERON:0004921,2.60e-07,118;UBERON:0001043,4.60e-07,3;UBERON:0009143,4.60e-07,3;UBERON:0001003,6.06e-07,15;UBERON:0007376,6.06e-07,15;UBERON:0007383,6.06e-07,15;UBERON:0001723,8.94e-07,3;UBERON:0001033,8.94e-07,3;UBERON:0010056,8.94e-07,3 | |||
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|short_description=p3@ALDH3B2 | |short_description=p3@ALDH3B2 | ||
}} | }} |
Latest revision as of 19:17, 19 September 2015
Short description: | p3@ALDH3B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ALDH3B2_5end |
Coexpression cluster: | C3197_breast_salivary_esophagus_tonsil_tongue_nasal_Urothelial |
Association with transcript: | 65bp_to_ENST00000349015, NM_000695, uc001omr.2, uc009ysa.1_5end |
EntrezGene: | ALDH3B2 |
HGNC: | 411 |
UniProt: | P48448 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 3.28e-21 | 5 |
protein secreting cell | 1.22e-17 | 6 |
endo-epithelial cell | 4.23e-16 | 42 |
acinar cell of salivary gland | 2.02e-13 | 3 |
endodermal cell | 1.61e-12 | 58 |
duct epithelial cell | 2.24e-12 | 3 |
branched duct epithelial cell | 2.24e-12 | 3 |
tracheal epithelial cell | 2.24e-12 | 3 |
tracheoblast | 2.24e-12 | 3 |
glandular epithelial cell | 1.13e-11 | 9 |
epithelial cell of tracheobronchial tree | 3.73e-11 | 9 |
epithelial cell of lower respiratory tract | 3.73e-11 | 9 |
respiratory epithelial cell | 8.22e-11 | 13 |
general ecto-epithelial cell | 1.58e-10 | 14 |
corneal epithelial cell | 5.32e-10 | 2 |
epithelial cell | 1.01e-09 | 253 |
sebum secreting cell | 1.58e-09 | 2 |
epithelial cell of sweat gland | 1.58e-09 | 2 |
epithelial cell of skin gland | 1.58e-09 | 2 |
acinar cell of sebaceous gland | 1.58e-09 | 2 |
epithelial cell of alimentary canal | 2.59e-09 | 20 |
epidermal cell | 1.14e-07 | 9 |
ecto-epithelial cell | 6.89e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.74e-18 | 4 |
breast cancer | 7.74e-18 | 4 |