FFCP PHASE1:Hg19::chr16:5956033..5956073,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:5956033..5956073,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr16:5956033..5956073,- | |description=CAGE_peak_at_chr16:5956033..5956073,- | ||
|id=chr16:5956033..5956073,- | |id=chr16:5956033..5956073,- | ||
|ontology_enrichment_celltype=CL:0000128!8.89e-11!7;CL:0000126!8.89e-11!7;CL:0000127!8.89e-11!7;CL:0002453!8.89e-11!7;CL:0002166!3.11e-08!3;CL:0000064!3.34e-08!3;CL:0005012!3.34e-08!3;CL:0000067!3.34e-08!3;CL:0002304!3.34e-08!3;CL:0002621!4.12e-08!3;CL:0002605!2.98e-07!3 | |ontology_enrichment_celltype=CL:0000128!8.89e-11!7;CL:0000126!8.89e-11!7;CL:0000127!8.89e-11!7;CL:0002453!8.89e-11!7;CL:0002166!3.11e-08!3;CL:0000064!3.34e-08!3;CL:0005012!3.34e-08!3;CL:0000067!3.34e-08!3;CL:0002304!3.34e-08!3;CL:0002621!4.12e-08!3;CL:0002605!2.98e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000064;5.10e-25;3!CL:0000067;5.10e-25;3!CL:0005012;5.10e-25;3!CL:0002304;5.10e-25;3!CL:0002166;6.77e-12;3!CL:0000342;1.99e-09;1!CL:0002565;1.99e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.39e-25,3;CL:0000067,8.39e-25,3;CL:0005012,8.39e-25,3;CL:0002304,8.39e-25,3;CL:0002166,5.90e-12,3;CL:0000342,2.67e-09,1;CL:0002565,2.67e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;5.08e-10;1!DOID:0070004;5.08e-10;1!DOID:0060060;6.04e-10;1!DOID:0060061;6.04e-10;1!DOID:8691;6.04e-10;1!DOID:0060085;1.99e-09;1!DOID:3165;1.99e-09;1!DOID:0060121;1.99e-09;1!DOID:2438;1.99e-09;1!DOID:4418;1.99e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,5.31e-10,1;DOID:0070004,5.31e-10,1;DOID:0060060,6.31e-10,1;DOID:0060061,6.31e-10,1;DOID:8691,6.31e-10,1;DOID:0060085,1.48e-09,1;DOID:3165,1.48e-09,1;DOID:0060121,1.48e-09,1;DOID:2438,1.48e-09,1;DOID:4418,1.48e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000033!1.42e-16!123;UBERON:0001869!2.41e-16!32;UBERON:0003056!1.50e-15!61;UBERON:0000153!2.47e-15!129;UBERON:0007811!2.47e-15!129;UBERON:0001893!3.85e-15!34;UBERON:0002791!6.92e-14!33;UBERON:0002020!2.29e-13!34;UBERON:0003528!2.29e-13!34;UBERON:0003075!3.13e-13!86;UBERON:0007284!3.13e-13!86;UBERON:0000956!1.10e-12!25;UBERON:0000203!1.10e-12!25;UBERON:0000200!1.29e-12!6;UBERON:0002346!2.58e-12!90;UBERON:0002780!7.54e-12!41;UBERON:0001890!7.54e-12!41;UBERON:0006240!7.54e-12!41;UBERON:0003080!1.81e-11!42;UBERON:0004121!2.97e-11!169;UBERON:0001017!3.99e-11!82;UBERON:0000924!9.23e-11!173;UBERON:0006601!9.23e-11!173;UBERON:0000488!2.40e-10!4;UBERON:0005743!2.58e-10!86;UBERON:0007625!3.58e-10!11;UBERON:0000955!7.17e-10!69;UBERON:0006238!7.17e-10!69;UBERON:0001950!8.01e-10!20;UBERON:0001049!1.74e-09!57;UBERON:0005068!1.74e-09!57;UBERON:0006241!1.74e-09!57;UBERON:0007135!1.74e-09!57;UBERON:0002616!5.21e-09!59;UBERON:0002619!9.11e-09!22;UBERON:0000073!9.43e-09!94;UBERON:0001016!9.43e-09!94;UBERON:0001778!3.34e-08!3;UBERON:0001775!3.34e-08!3;UBERON:0001949!4.12e-08!3;UBERON:0001801!1.02e-07!14;UBERON:0000064!1.77e-07!219;UBERON:0002771!2.61e-07!3;UBERON:0002203!7.55e-07!6;UBERON:0001768!7.55e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;1.14e-32;4!UBERON:0001778;5.10e-25;3!UBERON:0001775;5.10e-25;3!UBERON:0002203;6.74e-22;6!UBERON:0001768;6.74e-22;6!UBERON:0002200;6.74e-22;6!UBERON:0007625;1.64e-18;11!UBERON:0001801;1.58e-14;14!UBERON:0006876;4.62e-12;11!UBERON:0000019;1.13e-10;19!UBERON:0000047;1.13e-10;19!UBERON:0004088;1.13e-10;19!UBERON:0010230;1.13e-10;19!UBERON:0000970;3.94e-10;20!UBERON:0002104;1.22e-09;21!UBERON:0001456;1.22e-09;21!UBERON:0001874;1.99e-09;1!UBERON:0002506;1.99e-09;1!UBERON:0001769;1.99e-09;1!UBERON:0001708;3.81e-09;4!UBERON:0008895;3.81e-09;4!UBERON:0010371;7.19e-09;31!UBERON:0000020;8.66e-09;23!UBERON:0002331;2.01e-08;10!UBERON:0001032;2.04e-08;24!UBERON:0004456;2.04e-08;24!UBERON:0011159;1.74e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,2.50e-32,4;UBERON:0001778,8.39e-25,3;UBERON:0001775,8.39e-25,3;UBERON:0002203,1.13e-21,6;UBERON:0001768,1.13e-21,6;UBERON:0002200,1.13e-21,6;UBERON:0007625,2.38e-18,11;UBERON:0001801,2.11e-14,14;UBERON:0006876,6.10e-12,11;UBERON:0000033,1.71e-10,56;UBERON:0000019,4.80e-10,20;UBERON:0000047,4.80e-10,20;UBERON:0010312,4.80e-10,20;UBERON:0004088,4.80e-10,20;UBERON:0010230,4.80e-10,20;UBERON:0003072,4.80e-10,20;UBERON:0004128,4.80e-10,20;UBERON:0003071,4.80e-10,20;UBERON:0000970,1.47e-09,21;UBERON:0002104,1.47e-09,21;UBERON:0001874,1.62e-09,1;UBERON:0000153,2.36e-09,62;UBERON:0007811,2.36e-09,62;UBERON:0002506,2.67e-09,1;UBERON:0001769,2.67e-09,1;UBERON:0001708,3.44e-09,4;UBERON:0008895,3.44e-09,4;UBERON:0001456,4.05e-09,22;UBERON:0002331,2.01e-08,10;UBERON:0000358,2.01e-08,10;UBERON:0000307,2.01e-08,10;UBERON:0000091,2.01e-08,10;UBERON:0000087,2.01e-08,10;UBERON:0007010,2.01e-08,10;UBERON:0007806,2.01e-08,10;UBERON:0008780,2.01e-08,10;UBERON:0005728,2.01e-08,10;UBERON:0000020,2.40e-08,24;UBERON:0001032,2.40e-08,24;UBERON:0004456,2.40e-08,24;UBERON:0011159,1.61e-07,5;UBERON:0001444,2.13e-07,49 | |||
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| ||
|short_description=p@chr16:5956033..5956073,- | |short_description=p@chr16:5956033..5956073,- | ||
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Latest revision as of 06:42, 17 September 2015
Short description: | p@chr16:5956033..5956073, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:5956033..5956073, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.39e-25 | 3 |
ciliated epithelial cell | 8.39e-25 | 3 |
multi-ciliated epithelial cell | 8.39e-25 | 3 |
non-pigmented ciliary epithelial cell | 8.39e-25 | 3 |
epithelial cell of Malassez | 5.90e-12 | 3 |
pigment cell (sensu Vertebrata) | 2.67e-09 | 1 |
iris pigment epithelial cell | 2.67e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 5.31e-10 | 1 |
myeloma | 5.31e-10 | 1 |
non-Hodgkin lymphoma | 6.31e-10 | 1 |
cutaneous T cell lymphoma | 6.31e-10 | 1 |
mycosis fungoides | 6.31e-10 | 1 |
organ system benign neoplasm | 1.48e-09 | 1 |
skin benign neoplasm | 1.48e-09 | 1 |
integumentary system benign neoplasm | 1.48e-09 | 1 |
dermis tumor | 1.48e-09 | 1 |
cutaneous fibrous histiocytoma | 1.48e-09 | 1 |