FFCP PHASE1:Hg19::chr10:28287818..28287850,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:28287818..28287850,-
|short_description=p2@ARMC4
|description=CAGE_peak_2_at_ARMC4_5end
|association_with_transcript=-27bp_to_uc009xky.2_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55130 | |EntrezGene=55130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=25583 | |HGNC=25583 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_uc009xky.2_5end | |||
|cluster_id=chr10:28287818..28287850,- | |||
|description=CAGE_peak_2_at_ARMC4_5end | |||
|id=chr10:28287818..28287850,- | |||
|ontology_enrichment_celltype=CL:0002620!2.63e-09!23;CL:0000055!5.27e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.51e-17;23!CL:0002622;2.34e-09;3!CL:0002618;2.77e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.12e-17,23;CL:0002622,4.17e-09,3;CL:0002618,2.09e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.16e-08;10 | |||
|ontology_enrichment_disease=DOID:14566!2.50e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:17;5.95e-09;5!DOID:450;5.95e-09;5!DOID:66;5.95e-09;5!DOID:423;5.95e-09;5!DOID:0080000;5.95e-09;5!DOID:11722;5.95e-09;5!DOID:3093;1.24e-07;11!DOID:3307;2.77e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.96e-09,5;DOID:450,6.96e-09,5;DOID:66,6.96e-09,5;DOID:423,6.96e-09,5;DOID:0080000,6.96e-09,5;DOID:11722,6.96e-09,5;DOID:3093,1.93e-07,11;DOID:3307,2.78e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.37e-09;41!UBERON:0000007;3.76e-07;2!UBERON:0001737;6.57e-07;9!UBERON:0001557;6.57e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.60e-11,41;UBERON:0002199,1.08e-09,46;UBERON:0002416,1.08e-09,46;UBERON:0003102,1.17e-07,99;UBERON:0000007,4.20e-07,2;UBERON:0001737,6.70e-07,9 | |||
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| ||
|short_description=p2@ARMC4 | |||
}} | }} |
Latest revision as of 19:36, 17 September 2015
Short description: | p2@ARMC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARMC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_uc009xky.2_5end |
EntrezGene: | ARMC4 |
HGNC: | 25583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.12e-17 | 23 |
prostate stromal cell | 4.17e-09 | 3 |
endothelial cell of umbilical vein | 2.09e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.60e-11 | 41 |
integument | 1.08e-09 | 46 |
integumental system | 1.08e-09 | 46 |
surface structure | 1.17e-07 | 99 |
pituitary gland | 4.20e-07 | 2 |
larynx | 6.70e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.96e-09 | 5 |
myotonic disease | 6.96e-09 | 5 |
muscle tissue disease | 6.96e-09 | 5 |
myopathy | 6.96e-09 | 5 |
muscular disease | 6.96e-09 | 5 |
myotonic dystrophy | 6.96e-09 | 5 |
nervous system cancer | 1.93e-07 | 11 |
teratoma | 2.78e-07 | 2 |