FFCP PHASE1:Hg19::chr10:24912061..24912087,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:24912061..24912087,-
|short_description=p12@ARHGAP21
|description=CAGE_peak_12_at_ARHGAP21_5end
|association_with_transcript=-290bp_to_ENST00000483114_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57584 | |EntrezGene=57584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23725 | |HGNC=23725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-290bp_to_ENST00000483114_5end | |||
|cluster_id=chr10:24912061..24912087,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_12_at_ARHGAP21_5end | |||
|id=chr10:24912061..24912087,- | |||
|ontology_enrichment_celltype=CL:0000791!1.22e-24!18;CL:0000789!1.22e-24!18;CL:0002420!1.22e-24!18;CL:0002419!1.22e-24!18;CL:0000790!1.22e-24!18;CL:0000084!9.01e-19!25;CL:0000827!9.01e-19!25;CL:0000625!1.02e-14!11;CL:0000624!1.18e-13!6;CL:0000838!2.95e-11!52;CL:0000542!6.03e-11!53;CL:0000051!6.03e-11!53;CL:0000898!1.59e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.31e-22;18!CL:0000789;1.31e-22;18!CL:0002419;1.31e-22;18!CL:0000624;2.53e-18;6!CL:0000084;9.41e-16;25!CL:0000625;7.81e-10;11!CL:0000815;1.14e-09;2!CL:0000792;1.14e-09;2!CL:0002677;1.14e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.82e-22,18;CL:0000789,1.82e-22,18;CL:0002420,1.82e-22,18;CL:0002419,1.82e-22,18;CL:0000790,1.82e-22,18;CL:0000624,1.76e-18,6;CL:0000084,1.19e-15,25;CL:0000827,1.19e-15,25;CL:0000815,6.65e-10,2;CL:0000792,6.65e-10,2;CL:0002677,6.65e-10,2;CL:0000625,1.23e-09,11;CL:0000898,7.17e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.31e-22;18!UBERON:0010122;2.54e-10;2!UBERON:0006601;9.69e-09;82!UBERON:0006215;4.56e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;2.17e-52;20!UBERON:0001869;1.23e-49;32!UBERON:0001893;1.21e-47;34!UBERON:0002619;1.66e-47;22!UBERON:0002791;1.61e-46;32!UBERON:0003528;6.10e-42;34!UBERON:0002020;6.10e-42;34!UBERON:0000956;1.38e-41;25!UBERON:0000203;1.38e-41;25!UBERON:0002780;1.13e-28;41!UBERON:0001890;1.13e-28;41!UBERON:0000200;8.25e-28;6!UBERON:0000073;1.18e-20;53!UBERON:0002616;1.18e-20;53!UBERON:0000369;8.68e-19;4!UBERON:0002435;8.68e-19;4!UBERON:0000204;8.68e-19;4!UBERON:0002420;1.29e-17;9!UBERON:0007245;1.29e-17;9!UBERON:0010009;1.29e-17;9!UBERON:0010011;1.29e-17;9!UBERON:0000454;1.29e-17;9!UBERON:0001871;4.35e-16;6!UBERON:0001870;5.05e-15;3!UBERON:0002021;5.20e-15;5!UBERON:0005383;7.85e-15;3!UBERON:0005382;7.85e-15;3!UBERON:0000955;1.01e-14;68!UBERON:0001017;4.30e-14;75!UBERON:0009663;8.82e-11;7!UBERON:0002771;9.98e-11;2!UBERON:0002702;1.35e-10;2!UBERON:0001873;2.54e-10;2!UBERON:0001016;2.85e-10;83!UBERON:0001876;1.14e-09;2!UBERON:0001872;6.09e-09;5!UBERON:0000125;2.14e-08;9!UBERON:0002308;2.14e-08;9!UBERON:0000349;2.20e-08;5!UBERON:0007023;1.81e-07;114 | |||
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|short_description=p12@ARHGAP21 | |||
}} | }} |
Latest revision as of 16:51, 17 September 2015
Short description: | p12@ARHGAP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ARHGAP21_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -290bp_to_ENST00000483114_5end |
EntrezGene: | ARHGAP21 |
HGNC: | 23725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.82e-22 | 18 |
alpha-beta T cell | 1.82e-22 | 18 |
immature T cell | 1.82e-22 | 18 |
mature T cell | 1.82e-22 | 18 |
immature alpha-beta T cell | 1.82e-22 | 18 |
CD4-positive, alpha-beta T cell | 1.76e-18 | 6 |
T cell | 1.19e-15 | 25 |
pro-T cell | 1.19e-15 | 25 |
regulatory T cell | 6.65e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.65e-10 | 2 |
naive regulatory T cell | 6.65e-10 | 2 |
CD8-positive, alpha-beta T cell | 1.23e-09 | 11 |
naive T cell | 7.17e-07 | 3 |