FFCP PHASE1:Hg19::chr11:57193937..57193966,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29015 | |EntrezGene=29015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17466 | |HGNC=17466 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000528098,uc010rjs.1_5end | |association_with_transcript=0bp_to_ENST00000528098,uc010rjs.1_5end | ||
|cluster_id=chr11:57193937..57193966,- | |||
|description=CAGE_peak_9_at_SLC43A3_5end | |description=CAGE_peak_9_at_SLC43A3_5end | ||
|id=chr11:57193937..57193966,- | |id=chr11:57193937..57193966,- | ||
|ontology_enrichment_celltype=CL:0000988!1.44e-09!182;CL:0000037!2.51e-09!172;CL:0000566!2.51e-09!172;CL:0002031!3.57e-09!124;CL:0000738!3.95e-09!140;CL:0002032!6.17e-09!165;CL:0000837!6.17e-09!165;CL:0002087!9.49e-08!119;CL:0002057!9.82e-08!42;CL:0000860!8.41e-07!45 | |ontology_enrichment_celltype=CL:0000988!1.44e-09!182;CL:0000037!2.51e-09!172;CL:0000566!2.51e-09!172;CL:0002031!3.57e-09!124;CL:0000738!3.95e-09!140;CL:0002032!6.17e-09!165;CL:0000837!6.17e-09!165;CL:0002087!9.49e-08!119;CL:0002057!9.82e-08!42;CL:0000860!8.41e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0002535;3.64e-09;2!CL:0000945;2.75e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.96e-09,2;CL:0000945,2.22e-07,24;CL:0000826,2.22e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.14e-10;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;5.57e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,6.69e-09,2;DOID:305,2.85e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.50e-12!9;UBERON:0001557!3.65e-08!19 | |ontology_enrichment_uberon=UBERON:0001737!1.50e-12!9;UBERON:0001557!3.65e-08!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.99e-37;9!UBERON:0001557;1.99e-37;9!UBERON:0006955;3.64e-09;2!UBERON:0004801;3.64e-09;2!UBERON:0000072;1.63e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.06e-37,9;UBERON:0001557,8.68e-17,19;UBERON:0006955,3.96e-09,2;UBERON:0004801,3.96e-09,2;UBERON:0001041,1.23e-08,87;UBERON:0008947,1.57e-07,38;UBERON:0003258,1.57e-07,38 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82067028739756,3.20192298854788,2.91229890860613,0,0.383829398097213,0.154816123316076,0.919421224478927,0,0,0.154934401160603,1.42169232487422,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0.929119112685311,0,0.256160706529101,0.709446689665756,1.37898272294647,1.29096936716765,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.870627715885752,1.13477044938228,1.86846674698672,0.251248665256743,0.521482918420201,0.434377689410233,0.605399502633369,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0,0.334372990781356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,6.38856720215157,3.70886318171824,4.57920956778616,6.72793233667603,7.62578054323422,5.93176547777742,7.01122802432855,7.06397274451246,7.69494313892781,0,0,0,0,11.4079531339648,4.91413608338813,4.72631925345123,0.441463099414651,0,0,0.109750285408626,1.1240175325762,0.201057944823262,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0.246217006087397,1.17002132569619,0.148631162288728,0,0.335964256397719,0.141775097242386,0.0895585227028483,0.290633938513962,0.766765358330422,0,0.088048434013226,0,0,0.25248486685276,0.380987365753014,1.14596527667483,0,0,0.308482478109971,0.300343057843917,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20378439891088,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,1.09629938322967,0.261435451024901,0,0,0,0.824328093181778,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.731140468893853,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0,0.284567373393656,0,0,0,1.2700414963433,0,0,0,1.25343916618419,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,1.31843099381408,0,0,0,2.77126022639704,0,6.52349468943668,0,1.70749867179921,0,0,0.197286811273867,0,0,0,0,0,0,1.13697999995054,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0.225595660617181,0,0.335643173951685,0.948768663620925,0.317873157960757,0,0,0,0,0,0.265372693510018,0,1.48260564340311,0.741383633679017,1.14864144456001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587954384486266,2.35059857767087,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.76205998859206,0,0,0,0,0,1.1248694577575,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,18.9052381444726,0,0,0,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0.852548188666271,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.758245587708239,0.570930667089935,0,1.40500471742064,0,0,0.467426619694449,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0.15543720058278,0,0,3.59842489730884,0.155262956876259,0,0,0,1.35231848097497,0.380805212168795,0,0,0.322231671127465,0,0,0,0,0,0,0,2.35885750512418,0,0,0,0,0,0.617602894321944,2.85069264452319,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,1.26757386311357,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0.860454717640555,0.354996002191696,0.511280428554946,0,0,0,0,0,1.17780280338292,3.53561982448581,0.647428837187895,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,1.39917618294901,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.763765899337979,0.404234377916439,0,0,0.0673520530145875,0.286888821570705,0,0.569822880276821,0.426909383510862,0,0,0,0,0,0,0,1.60284246151616 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82067028739756,3.20192298854788,2.91229890860613,0,0.383829398097213,0.154816123316076,0.919421224478927,0,0,0.154934401160603,1.42169232487422,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0.929119112685311,0,0.256160706529101,0.709446689665756,1.37898272294647,1.29096936716765,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.870627715885752,1.13477044938228,1.86846674698672,0.251248665256743,0.521482918420201,0.434377689410233,0.605399502633369,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0,0.334372990781356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,6.38856720215157,3.70886318171824,4.57920956778616,6.72793233667603,7.62578054323422,5.93176547777742,7.01122802432855,7.06397274451246,7.69494313892781,0,0,0,0,11.4079531339648,4.91413608338813,4.72631925345123,0.441463099414651,0,0,0.109750285408626,1.1240175325762,0.201057944823262,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0.246217006087397,1.17002132569619,0.148631162288728,0,0.335964256397719,0.141775097242386,0.0895585227028483,0.290633938513962,0.766765358330422,0,0.088048434013226,0,0,0.25248486685276,0.380987365753014,1.14596527667483,0,0,0.308482478109971,0.300343057843917,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20378439891088,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,1.09629938322967,0.261435451024901,0,0,0,0.824328093181778,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.731140468893853,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0,0.284567373393656,0,0,0,1.2700414963433,0,0,0,1.25343916618419,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,1.31843099381408,0,0,0,2.77126022639704,0,6.52349468943668,0,1.70749867179921,0,0,0.197286811273867,0,0,0,0,0,0,1.13697999995054,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0.225595660617181,0,0.335643173951685,0.948768663620925,0.317873157960757,0,0,0,0,0,0.265372693510018,0,1.48260564340311,0.741383633679017,1.14864144456001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587954384486266,2.35059857767087,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.76205998859206,0,0,0,0,0,1.1248694577575,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,18.9052381444726,0,0,0,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0.852548188666271,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.758245587708239,0.570930667089935,0,1.40500471742064,0,0,0.467426619694449,0,0.189403005275089,0.251567901752575,0.889811221596536,0,0,0.15543720058278,0,0,3.59842489730884,0.155262956876259,0,0,0,1.35231848097497,0.380805212168795,0,0,0.322231671127465,0,0,0,0,0,0,0,2.35885750512418,0,0,0,0,0,0.617602894321944,2.85069264452319,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,1.26757386311357,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0.860454717640555,0.354996002191696,0.511280428554946,0,0,0,0,0,1.17780280338292,3.53561982448581,0.647428837187895,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,1.39917618294901,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.763765899337979,0.404234377916439,0,0,0.0673520530145875,0.286888821570705,0,0.569822880276821,0.426909383510862,0,0,0,0,0,0,0,1.60284246151616 | ||
|short_description=p9@SLC43A3 | |short_description=p9@SLC43A3 | ||
}} | }} |
Latest revision as of 09:41, 18 September 2015
Short description: | p9@SLC43A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC43A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528098, uc010rjs.1_5end |
EntrezGene: | SLC43A3 |
HGNC: | 17466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.96e-09 | 2 |
lymphocyte of B lineage | 2.22e-07 | 24 |
pro-B cell | 2.22e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.06e-37 | 9 |
upper respiratory tract | 8.68e-17 | 19 |
uterine epithelium | 3.96e-09 | 2 |
cervix epithelium | 3.96e-09 | 2 |
foregut | 1.23e-08 | 87 |
respiratory primordium | 1.57e-07 | 38 |
endoderm of foregut | 1.57e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.69e-09 | 2 |
carcinoma | 2.85e-08 | 106 |