FFCP PHASE1:Hg19::chr10:17271821..17271858,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:17271821..17271858,-
|short_description=p7@uc001iot.1
|description=CAGE_peak_7_at_uc001iot.1_5end
|association_with_transcript=124bp_to_uc001iot.1_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=124bp_to_uc001iot.1_5end | |||
|cluster_id=chr10:17271821..17271858,- | |||
|coexpression_cluster_id=C490 | |||
|description=CAGE_peak_7_at_uc001iot.1_5end | |||
|id=chr10:17271821..17271858,- | |||
|ontology_enrichment_celltype=CL:0000055!2.31e-27!180;CL:0002371!1.40e-24!591;CL:0000144!3.90e-22!625;CL:0000048!4.95e-17!430;CL:0000057!6.29e-16!75;CL:0000723!7.46e-16!436;CL:0000222!9.82e-16!119;CL:0000034!1.03e-14!444;CL:0000548!1.56e-14!679;CL:0000004!1.56e-14!679;CL:0000255!1.56e-14!679;CL:0000012!3.09e-14!682;CL:0000680!3.24e-11!57;CL:0000056!3.24e-11!57;CL:0000355!3.24e-11!57;CL:0000183!3.85e-11!59;CL:0000187!4.98e-11!54;CL:0000003!2.54e-10!722;CL:0000192!4.22e-10!42;CL:0000514!4.22e-10!42;CL:0002320!2.47e-09!365;CL:0000393!1.25e-08!60;CL:0000211!1.25e-08!60;CL:0000219!1.99e-08!390;CL:0000134!4.72e-08!358;CL:0000359!5.33e-08!32;CL:0002620!6.04e-08!23;CL:0002139!1.47e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.40e-09;24!CL:0002620;4.99e-09;23!CL:0000071;2.47e-08;18!CL:0000057;3.49e-08;73!CL:0000192;5.46e-07;43!CL:0000359;5.89e-07;32!CL:1000413;7.33e-07;9!CL:0000860;8.20e-07;33!CL:0002057;8.20e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.21e-21,427;CL:0000057,3.04e-21,76;CL:0000723,3.65e-20,433;CL:0000034,1.31e-18,441;CL:0000222,2.10e-14,121;CL:0002320,4.79e-12,361;CL:0000187,5.06e-11,55;CL:0000680,5.11e-11,58;CL:0000056,5.11e-11,58;CL:0000355,5.11e-11,58;CL:0000134,1.10e-10,354;CL:0000219,8.10e-10,386;CL:0002620,1.38e-09,23;CL:0000393,2.49e-09,61;CL:0000211,2.49e-09,61;CL:0000192,2.52e-09,43;CL:0000514,2.52e-09,43;CL:0002139,7.31e-09,24;CL:0000071,3.11e-08,18;CL:0002546,3.11e-08,18;CL:0000115,2.73e-07,36;CL:0000359,3.40e-07,32;CL:1000413,7.64e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;2.47e-08;18!CL:0000514;5.46e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.60e-17!216;UBERON:0002204!6.82e-16!167;UBERON:0002049!3.02e-15!79;UBERON:0007798!3.02e-15!79;UBERON:0000914!9.45e-15!83;UBERON:0002329!9.45e-15!83;UBERON:0003077!9.45e-15!83;UBERON:0003059!9.45e-15!83;UBERON:0007282!9.45e-15!83;UBERON:0009618!9.45e-15!83;UBERON:0007285!9.45e-15!83;UBERON:0004535!7.67e-14!110;UBERON:0004290!1.11e-13!70;UBERON:0004872!3.90e-13!84;UBERON:0001637!7.86e-13!42;UBERON:0003509!7.86e-13!42;UBERON:0004572!7.86e-13!42;UBERON:0001009!1.22e-12!113;UBERON:0000055!1.44e-12!69;UBERON:0001981!4.79e-12!60;UBERON:0007500!4.79e-12!60;UBERON:0004537!4.79e-12!60;UBERON:0006965!4.79e-12!60;UBERON:0000486!8.62e-12!82;UBERON:0000926!1.98e-11!448;UBERON:0004120!1.98e-11!448;UBERON:0006603!1.98e-11!448;UBERON:0001134!1.30e-09!61;UBERON:0002036!1.30e-09!61;UBERON:0003082!1.30e-09!61;UBERON:0002384!1.72e-09!375;UBERON:0004573!2.03e-09!33;UBERON:0004571!2.03e-09!33;UBERON:0002385!8.00e-09!63;UBERON:0001015!8.00e-09!63;UBERON:0000383!8.00e-09!63;UBERON:0003914!1.50e-07!118;UBERON:0005256!2.38e-07!143;UBERON:0004765!8.45e-07!101;UBERON:0001434!8.45e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.29e-10;42!UBERON:0003509;1.29e-10;42!UBERON:0004572;1.29e-10;42!UBERON:0004573;4.06e-09;33!UBERON:0004571;4.06e-09;33!UBERON:0004638;2.47e-08;18!UBERON:0001986;2.47e-08;18!UBERON:0004852;2.47e-08;18!UBERON:0006914;2.51e-08;25!UBERON:0002049;2.58e-08;75!UBERON:0007798;2.58e-08;75!UBERON:0002067;6.08e-08;9!UBERON:0000487;1.07e-07;22!UBERON:0007500;1.62e-07;56!UBERON:0001981;1.62e-07;56!UBERON:0004537;1.62e-07;56!UBERON:0003915;7.33e-07;9!UBERON:0004700;7.33e-07;9!UBERON:0001917;7.33e-07;9 | |||
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| ||
|short_description=p7@uc001iot.1 | |||
}} | }} |
Latest revision as of 12:15, 23 July 2015
Short description: | p7@uc001iot.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_uc001iot.1_5end |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | 124bp_to_uc001iot.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.21e-21 | 427 |
fibroblast | 3.04e-21 | 76 |
somatic stem cell | 3.65e-20 | 433 |
stem cell | 1.31e-18 | 441 |
mesodermal cell | 2.10e-14 | 121 |
connective tissue cell | 4.79e-12 | 361 |
muscle cell | 5.06e-11 | 55 |
muscle precursor cell | 5.11e-11 | 58 |
myoblast | 5.11e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.11e-11 | 58 |
mesenchymal cell | 1.10e-10 | 354 |
motile cell | 8.10e-10 | 386 |
skin fibroblast | 1.38e-09 | 23 |
electrically responsive cell | 2.49e-09 | 61 |
electrically active cell | 2.49e-09 | 61 |
smooth muscle cell | 2.52e-09 | 43 |
smooth muscle myoblast | 2.52e-09 | 43 |
endothelial cell of vascular tree | 7.31e-09 | 24 |
blood vessel endothelial cell | 3.11e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.11e-08 | 18 |
endothelial cell | 2.73e-07 | 36 |
vascular associated smooth muscle cell | 3.40e-07 | 32 |
endothelial cell of artery | 7.64e-07 | 9 |