FFCP PHASE1:Mm9::chr7:82731110..82731121,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=909 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:82731110..82731121,+ | |||
|description=CAGE_peak_at_chr7:82731110..82731121,+ | |description=CAGE_peak_at_chr7:82731110..82731121,+ | ||
|id=chr7:82731110..82731121,+ | |id=chr7:82731110..82731121,+ | ||
|ontology_enrichment_celltype=CL:0000988!4.46e-09!32;CL:0002032!4.46e-09!32;CL:0000037!4.46e-09!32;CL:0000566!4.46e-09!32;CL:0000837!4.46e-09!32 | |ontology_enrichment_celltype=CL:0000988!4.46e-09!32;CL:0002032!4.46e-09!32;CL:0000037!4.46e-09!32;CL:0000566!4.46e-09!32;CL:0000837!4.46e-09!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.39e-10,32;CL:0002032,2.39e-10,32;CL:0000037,2.39e-10,32;CL:0000837,2.39e-10,32;CL:0000049,2.44e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.11e-09,3;DOID:4045,6.11e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.44e-14!48;UBERON:0002390!9.88e-13!45;UBERON:0003061!9.88e-13!45;UBERON:0004177!2.23e-11!29;UBERON:0001004!3.43e-10!42;UBERON:0003408!8.37e-10!24;UBERON:0002405!1.08e-09!70;UBERON:0000065!1.44e-09!41;UBERON:0002370!4.16e-09!23;UBERON:0000974!4.16e-09!23;UBERON:0004807!4.16e-09!23;UBERON:0005058!4.16e-09!23;UBERON:0003351!4.16e-09!23;UBERON:0009113!4.16e-09!23;UBERON:0003295!4.16e-09!23;UBERON:0009722!4.16e-09!23;UBERON:0005562!4.16e-09!23;UBERON:0007690!4.16e-09!23;UBERON:0006562!1.72e-08!24;UBERON:0001557!1.72e-08!24;UBERON:0001042!1.72e-08!24;UBERON:0008814!1.72e-08!24;UBERON:0009145!1.72e-08!24;UBERON:0000072!6.09e-07!27 | |ontology_enrichment_uberon=UBERON:0002193!1.44e-14!48;UBERON:0002390!9.88e-13!45;UBERON:0003061!9.88e-13!45;UBERON:0004177!2.23e-11!29;UBERON:0001004!3.43e-10!42;UBERON:0003408!8.37e-10!24;UBERON:0002405!1.08e-09!70;UBERON:0000065!1.44e-09!41;UBERON:0002370!4.16e-09!23;UBERON:0000974!4.16e-09!23;UBERON:0004807!4.16e-09!23;UBERON:0005058!4.16e-09!23;UBERON:0003351!4.16e-09!23;UBERON:0009113!4.16e-09!23;UBERON:0003295!4.16e-09!23;UBERON:0009722!4.16e-09!23;UBERON:0005562!4.16e-09!23;UBERON:0007690!4.16e-09!23;UBERON:0006562!1.72e-08!24;UBERON:0001557!1.72e-08!24;UBERON:0001042!1.72e-08!24;UBERON:0008814!1.72e-08!24;UBERON:0009145!1.72e-08!24;UBERON:0000072!6.09e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,2.43e-18,24;UBERON:0002370,9.67e-17,23;UBERON:0000974,9.67e-17,23;UBERON:0004807,9.67e-17,23;UBERON:0005058,9.67e-17,23;UBERON:0003351,9.67e-17,23;UBERON:0009113,9.67e-17,23;UBERON:0003295,9.67e-17,23;UBERON:0009722,9.67e-17,23;UBERON:0005562,9.67e-17,23;UBERON:0007690,9.67e-17,23;UBERON:0006562,6.44e-16,24;UBERON:0001557,6.44e-16,24;UBERON:0001042,6.44e-16,24;UBERON:0008814,6.44e-16,24;UBERON:0009145,6.44e-16,24;UBERON:0002193,2.11e-15,48;UBERON:0002405,2.11e-15,48;UBERON:0002390,7.32e-15,45;UBERON:0003061,7.32e-15,45;UBERON:0000072,8.15e-14,27;UBERON:0004177,1.17e-12,29;UBERON:0005057,1.17e-12,29;UBERON:0007811,3.79e-11,36;UBERON:0001004,1.61e-10,42;UBERON:0000077,5.54e-10,35;UBERON:0000065,1.93e-09,41;UBERON:0000153,8.05e-09,43 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,1.12630977721333,0,0,0.0797721589953364,2.39681021903688,0.437102012094987,0.999329285446988,0.809901069559304,0,4.57420139769445,5.75880621144103,0.84877930359606,0.0850432901510698,0.794327609607082,0.783599367416806,0.799962113967033,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,10.8818223991596,3.906676722619,6.28228492768558,7.05877785637217,6.14740936462601,4.36959317728038,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,3.85899993932794,1.45072428402269,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.84831672011889,0,0,0,0,0,0,0,0,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,0,0,0,3.95389910869537,1.79970819298022,4.3203877204842,0,0,0,0,0,0,0,0,0.995255764880744,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,3.51106593656617,3.08817488537658,3.40996199274711,0,0.234526059981096,0.180062061461015,0,0,0,0.232533944750408,0,0.233530684734339,0,0,0,0,0,0,0,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0.482354319504834,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,1.84753190166605,0,0,0,0.234690248288502,0.167506257441816,0,0.780534591431195,0.315270288212382,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0.582961673259701,0,0.683483523191411,0,0.740778109478847,0.376736914009382,0.683471138605126,0.457556346413045,8.32894306969891,9.23679585336143,10.3649980353318,0,0,0.203319467126849,0,0,0,0,0,0,0,1.24267862617385,0,0.149516546043979,0,0,0,0,0,0,0,0,0.288030006257865,2.52808896502543,0,0.924398614483445,1.16928740680016,1.07416017400489,2.38417625737518,2.28371354087941,1.32920574457119,2.3222283488074,3.50551310612999,1.81487133246313,2.24153125701431,2.5977197242889,5.02570679380746,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0,0.128050304809739,0,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0.859484216193193,0,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,1.12630977721333,0,0,0.0797721589953364,2.39681021903688,0.437102012094987,0.999329285446988,0.809901069559304,0,4.57420139769445,5.75880621144103,0.84877930359606,0.0850432901510698,0.794327609607082,0.783599367416806,0.799962113967033,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,10.8818223991596,3.906676722619,6.28228492768558,7.05877785637217,6.14740936462601,4.36959317728038,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,3.85899993932794,1.45072428402269,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.84831672011889,0,0,0,0,0,0,0,0,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,0,0,0,3.95389910869537,1.79970819298022,4.3203877204842,0,0,0,0,0,0,0,0,0.995255764880744,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,3.51106593656617,3.08817488537658,3.40996199274711,0,0.234526059981096,0.180062061461015,0,0,0,0.232533944750408,0,0.233530684734339,0,0,0,0,0,0,0,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0.482354319504834,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,1.84753190166605,0,0,0,0.234690248288502,0.167506257441816,0,0.780534591431195,0.315270288212382,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0.582961673259701,0,0.683483523191411,0,0.740778109478847,0.376736914009382,0.683471138605126,0.457556346413045,8.32894306969891,9.23679585336143,10.3649980353318,0,0,0.203319467126849,0,0,0,0,0,0,0,1.24267862617385,0,0.149516546043979,0,0,0,0,0,0,0,0,0.288030006257865,2.52808896502543,0,0.924398614483445,1.16928740680016,1.07416017400489,2.38417625737518,2.28371354087941,1.32920574457119,2.3222283488074,3.50551310612999,1.81487133246313,2.24153125701431,2.5977197242889,5.02570679380746,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0,0.128050304809739,0,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0.859484216193193,0,0,0.231867835620421 | ||
|short_description=p@chr7:82731110..82731121,+ | |short_description=p@chr7:82731110..82731121,+ | ||
}} | }} |
Latest revision as of 14:13, 5 August 2015
Short description: | p@chr7:82731110..82731121, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:82731110..82731121, + |
Coexpression cluster: | MCL_coexpression_mm9:909 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.39e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.39e-10 | 32 |
hematopoietic stem cell | 2.39e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.39e-10 | 32 |
common myeloid progenitor | 2.44e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 2.43e-18 | 24 |
thymus | 9.67e-17 | 23 |
neck | 9.67e-17 | 23 |
respiratory system epithelium | 9.67e-17 | 23 |
hemolymphoid system gland | 9.67e-17 | 23 |
pharyngeal epithelium | 9.67e-17 | 23 |
thymic region | 9.67e-17 | 23 |
pharyngeal gland | 9.67e-17 | 23 |
entire pharyngeal arch endoderm | 9.67e-17 | 23 |
thymus primordium | 9.67e-17 | 23 |
early pharyngeal endoderm | 9.67e-17 | 23 |
pharynx | 6.44e-16 | 24 |
upper respiratory tract | 6.44e-16 | 24 |
chordate pharynx | 6.44e-16 | 24 |
pharyngeal arch system | 6.44e-16 | 24 |
pharyngeal region of foregut | 6.44e-16 | 24 |
hemolymphoid system | 2.11e-15 | 48 |
immune system | 2.11e-15 | 48 |
hematopoietic system | 7.32e-15 | 45 |
blood island | 7.32e-15 | 45 |
segment of respiratory tract | 8.15e-14 | 27 |
hemopoietic organ | 1.17e-12 | 29 |
immune organ | 1.17e-12 | 29 |
craniocervical region | 3.79e-11 | 36 |
respiratory system | 1.61e-10 | 42 |
mixed endoderm/mesoderm-derived structure | 5.54e-10 | 35 |
respiratory tract | 1.93e-09 | 41 |
anterior region of body | 8.05e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.11e-09 | 3 |
muscle cancer | 6.11e-09 | 3 |