FFCP PHASE1:Hg19::chr11:32851450..32851485,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79056 | |EntrezGene=79056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30799 | |HGNC=30799 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZD6 | |UniProt=Q9BZD6 | ||
|association_with_transcript=0bp_to_NM_024081_5end | |association_with_transcript=0bp_to_NM_024081_5end | ||
|cluster_id=chr11:32851450..32851485,+ | |||
|coexpression_cluster_id=C3144 | |||
|description=CAGE_peak_1_at_PRRG4_5end | |description=CAGE_peak_1_at_PRRG4_5end | ||
|id=chr11:32851450..32851485,+ | |id=chr11:32851450..32851485,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.13e-21!254;CL:0002076!1.09e-16!43;CL:0000223!1.97e-16!59;CL:0002251!2.39e-10!21;CL:0002368!5.92e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.13e-21!254;CL:0002076!1.09e-16!43;CL:0000223!1.97e-16!59;CL:0002251!2.39e-10!21;CL:0002368!5.92e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.73e-17;42!CL:0002251;1.42e-13;20!CL:0002368;6.69e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.23e-21,253;CL:0002076,2.56e-21,42;CL:0000223,1.69e-20,58;CL:0002251,1.79e-13,20;CL:0002368,7.31e-09,13 | |||
|ontology_enrichment_development_v019=CL:0000223;2.55e-11;58!UBERON:0006595;3.07e-09;86 | |||
|ontology_enrichment_disease=DOID:305!7.73e-20!106;DOID:0050687!3.77e-12!143;DOID:1749!5.49e-10!14 | |ontology_enrichment_disease=DOID:305!7.73e-20!106;DOID:0050687!3.77e-12!143;DOID:1749!5.49e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;7.49e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.46e-14,106;DOID:1749,6.91e-13,14;DOID:0050687,4.52e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.43e-29!169;UBERON:0000925!1.43e-29!169;UBERON:0006595!1.43e-29!169;UBERON:0001007!4.33e-23!155;UBERON:0001555!4.33e-23!155;UBERON:0007026!4.33e-23!155;UBERON:0004921!3.41e-21!129;UBERON:0004185!3.41e-21!129;UBERON:0000077!1.34e-19!130;UBERON:0001004!4.65e-16!72;UBERON:0001041!2.03e-14!98;UBERON:0000065!1.33e-11!53;UBERON:0005911!2.11e-11!82;UBERON:0000161!7.33e-11!35;UBERON:0008947!1.01e-08!38;UBERON:0003258!1.01e-08!38;UBERON:0000166!1.84e-08!21;UBERON:0000466!2.07e-08!126;UBERON:0000072!3.64e-08!46;UBERON:0005153!9.31e-08!37;UBERON:0005631!9.95e-08!14;UBERON:0000158!9.95e-08!14;UBERON:0002530!1.22e-07!59;UBERON:0000464!1.74e-07!104;UBERON:0005177!3.73e-07!107;UBERON:0000062!8.40e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.32e-12;33!UBERON:0000161;1.00e-09;19!UBERON:0000166;1.00e-09;19!UBERON:0001555;2.01e-09;54!UBERON:0000165;9.78e-09;28!UBERON:0001004;4.57e-08;65!UBERON:0000974;1.13e-07;6!UBERON:0001041;1.17e-07;14!UBERON:0000344;1.59e-07;20!UBERON:0005178;1.63e-07;34!UBERON:0002224;1.63e-07;34!UBERON:0001007;1.92e-07;81!UBERON:0002365;3.73e-07;31!UBERON:0002330;3.73e-07;31!UBERON:0005409;3.80e-07;22!UBERON:0000065;6.05e-07;44!UBERON:0005631;6.56e-07;10!UBERON:0000158;6.56e-07;10!UBERON:0005911;7.84e-07;36!UBERON:0005181;7.96e-07;35!UBERON:0004119;8.47e-07;158 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.73e-33,160;UBERON:0000925,1.73e-33,160;UBERON:0006595,1.73e-33,160;UBERON:0001007,2.79e-26,145;UBERON:0001555,2.79e-26,145;UBERON:0007026,2.79e-26,145;UBERON:0004921,2.32e-23,118;UBERON:0001004,1.78e-17,74;UBERON:0001041,6.98e-15,87;UBERON:0005911,9.94e-14,82;UBERON:0000161,6.27e-13,36;UBERON:0000065,1.62e-11,54;UBERON:0000166,9.73e-11,22;UBERON:0005631,4.44e-10,14;UBERON:0000158,4.44e-10,14;UBERON:0005153,3.96e-09,37;UBERON:0002530,1.17e-08,59;UBERON:0005177,1.33e-08,101;UBERON:0005178,1.78e-08,34;UBERON:0002224,1.78e-08,34;UBERON:0000165,3.37e-08,29;UBERON:0000930,3.37e-08,29;UBERON:0001008,4.49e-08,48;UBERON:0005181,4.58e-08,35;UBERON:0008947,1.09e-07,38;UBERON:0003258,1.09e-07,38;UBERON:0005157,1.50e-07,47;UBERON:0003124,1.63e-07,7;UBERON:0000344,1.68e-07,20;UBERON:0000072,1.68e-07,47;UBERON:0006554,1.91e-07,47;UBERON:0002365,4.21e-07,31;UBERON:0002330,4.21e-07,31;UBERON:0007023,9.70e-07,114;UBERON:0004175,9.91e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.45733936501509,3.48900583986214,6.55324116390517,5.53910654279752,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.550975469195755,0,0,1.85779347979291,14.7107395916628,5.12050061923025,6.65557218300218,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0.449446968890169,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78073625566651,10.9288586487763,18.5392221392215,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,22.2407966592693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4271725188802,14.1827982707234,17.2082757233402,0.853815942907168,0.795178609928912,1.39432731443422,0.725627385107593,0.756962552626885,0,0,0,0,0,0,1.30137480043828,1.34867752062481,0.723033089650446,0.992645754591546,0.435758888184812,0.949082476444386,1.34831308160164,1.17732879075208,0.38474715694639,0,0,0,0,29.1536580090211,22.6050259835854,2.95394953340702,0,8.48620225947483,0,9.54827483055042,1.1240175325762,7.03702806881416,29.4431255604124,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0.148631162288728,13.1227367581488,16.9661949480848,21.8333649753275,5.55262840757659,7.55648240136301,6.13412286664338,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4702107184155,2.99161459204025,21.5496066986738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75942385747893,9.98612637062982,5.44302527993425,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,4.71351853407327,11.228362336984,17.5874688867562,0,0,0.131124414959424,0.902399225814824,1.46329140498388,0,0,0.422206515571503,0,0,0,0,0,0,2.54876273045038,7.47968408035852,0.447749509444357,0,0,0,0,0,25.966334935226,0,0,12.0595762979196,21.4519881192052,0,0,0,0,0,0,0,0,0,6.7766815298001,6.1500821556834,10.5918551370505,13.3528270729326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,4.61866141082458,9.38423185750102,2.17781969722645,25.6071138112839,9.90162357143829,10.1082885400575,15.076625220247,21.8237230196611,2.02979043692868,6.117097657139,4.5571774973933,4.04994018278241,3.70226045777575,7.78167973431261,3.7802200606668,8.72437693923697,0,0,13.9672923109188,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,1.27753871307098,0,0,0.223676107892416,0.500547425135725,0,0,0,0,0,0,20.0240378236795,0.146508179271894,0,0,0,29.3655716227359,35.9327263807493,29.7945881036255,0,0,0,0.16480387422676,0,2.98871982376605,3.59169090190492,0.251932747854276,0.102268682502155,0,0,17.7040651760234,1.25314822272926,0,6.90503839458535,0,0,0.969332746095218,0,0,2.86470537193757,14.9556599993495,11.5999932069567,23.8966241399549,4.83081935556256,4.96414131712666,0,0,0,0,0.120596438625408,0,0,0,0,0,86.3032977084554,9.92658334698982,0,0,3.59030577639089,1.73835795075213,27.1150985772132,5.86224597771919,11.72676507241,0,0,0.332423363800313,0,0,0,0,0.158936578980379,1.26598838716816,4.57051862845614,5.51276978592369,0,13.9336670350991,20.4336974002713,26.8853263770795,0.296521128680622,0.123563938946503,0,0.134802265961354,0,0,0,27.9800405072888,10.9251170790342,16.177960516825,7.25944296291983,0,0,1.50323419414493,0.518440956986236,0,0,0,0,1.13843818411917,0,0.520679215005393,21.5583274311631,17.1506636963393,5.76598005198699,0,0.677294319023596,1.38869702463753,0.656923656425674,36.8558262655994,0,4.29363407483012,0,0,0,9.58201775400535,1.52301758477914,6.83049583165928,0.39961921916426,4.61089334893139,0.114536596165916,0,0.576219191952599,0,34.6470230886689,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,11.9807400299395,0,0,0.0671834724867263,0,2.32991899054908,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0.482259445395058,1.10031549277787,0.415440338029185,1.1248694577575,13.9284351820431,0,35.8915115731215,14.4214444357533,7.97309739651971,0,0,8.63618387937504,0,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,7.91382061861645,9.27548222385549,0,0.26446520348538,0,11.2770403570668,14.9502377594773,9.27505400088029,10.7702154390271,0,0.197611631897944,0.243585196761792,8.93677760878255,0,0,0,0,5.4968933687582,0,0,0,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0,3.80361822045529,0,0.106691729694141,0,0,0,8.11301144772778,12.4415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,14.5258623381518,21.4704896492887,61.2651519062408,16.2891189271977,0,0,0,2.55715116387475,0,2.34454203369928,1.57144016688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| ||
|short_description=p1@PRRG4 | |short_description=p1@PRRG4 | ||
}} | }} |
Latest revision as of 15:58, 17 September 2015
Short description: | p1@PRRG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRRG4_5end |
Coexpression cluster: | C3144_cervical_pharyngeal_oral_amniotic_keratoacanthoma_esophagus_squamous |
Association with transcript: | 0bp_to_NM_024081_5end |
EntrezGene: | PRRG4 |
HGNC: | 30799 |
UniProt: | Q9BZD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.23e-21 | 253 |
endo-epithelial cell | 2.56e-21 | 42 |
endodermal cell | 1.69e-20 | 58 |
epithelial cell of alimentary canal | 1.79e-13 | 20 |
respiratory epithelial cell | 7.31e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.73e-33 | 160 |
endoderm | 1.73e-33 | 160 |
presumptive endoderm | 1.73e-33 | 160 |
digestive system | 2.79e-26 | 145 |
digestive tract | 2.79e-26 | 145 |
primitive gut | 2.79e-26 | 145 |
subdivision of digestive tract | 2.32e-23 | 118 |
respiratory system | 1.78e-17 | 74 |
foregut | 6.98e-15 | 87 |
endo-epithelium | 9.94e-14 | 82 |
orifice | 6.27e-13 | 36 |
respiratory tract | 1.62e-11 | 54 |
oral opening | 9.73e-11 | 22 |
extraembryonic membrane | 4.44e-10 | 14 |
membranous layer | 4.44e-10 | 14 |
epithelial bud | 3.96e-09 | 37 |
gland | 1.17e-08 | 59 |
trunk region element | 1.33e-08 | 101 |
thoracic cavity element | 1.78e-08 | 34 |
thoracic cavity | 1.78e-08 | 34 |
mouth | 3.37e-08 | 29 |
stomodeum | 3.37e-08 | 29 |
renal system | 4.49e-08 | 48 |
thoracic segment organ | 4.58e-08 | 35 |
respiratory primordium | 1.09e-07 | 38 |
endoderm of foregut | 1.09e-07 | 38 |
epithelial fold | 1.50e-07 | 47 |
chorion | 1.63e-07 | 7 |
mucosa | 1.68e-07 | 20 |
segment of respiratory tract | 1.68e-07 | 47 |
urinary system structure | 1.91e-07 | 47 |
exocrine gland | 4.21e-07 | 31 |
exocrine system | 4.21e-07 | 31 |
adult organism | 9.70e-07 | 114 |
internal genitalia | 9.91e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.46e-14 | 106 |
squamous cell carcinoma | 6.91e-13 | 14 |
cell type cancer | 4.52e-08 | 143 |