FFCP PHASE1:Hg19::chr11:2160010..2160024,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC017277_5end | |association_with_transcript=0bp_to_BC017277_5end | ||
|cluster_id=chr11:2160010..2160024,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_10_at_BC017277_5end | |description=CAGE_peak_10_at_BC017277_5end | ||
|id=chr11:2160010..2160024,+ | |id=chr11:2160010..2160024,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.41e-32;19!CL:0002577;3.18e-14;3!CL:0002575;2.22e-10;2!CL:0002536;2.55e-10;2!CL:0002537;3.85e-09;5!CL:0002541;1.85e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.36e-32,19;CL:0002577,3.57e-14,3;CL:0002536,2.43e-10,2;CL:0002575,2.55e-10,2;CL:0002537,3.70e-09,5;CL:0002541,1.82e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.70e-10;11!UBERON:0009497;1.15e-08;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.99e-19!14;UBERON:0000158!2.99e-19!14;UBERON:0000478!2.73e-17!24;UBERON:0003124!3.92e-12!7;UBERON:0000305!6.62e-09!7;UBERON:0004871!1.20e-07!8;UBERON:0001987!1.27e-07!4;UBERON:0004340!1.27e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.21e-34;24!UBERON:0005631;1.72e-22;10!UBERON:0000158;1.72e-22;10!UBERON:0001987;2.16e-18;4!UBERON:0000305;1.02e-16;7!UBERON:0000922;1.20e-08;49!UBERON:0003124;1.85e-07;3!UBERON:0000920;1.85e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.44e-38,14;UBERON:0000158,3.44e-38,14;UBERON:0000478,1.20e-34,24;UBERON:0003124,2.23e-23,7;UBERON:0001987,2.48e-18,4;UBERON:0004340,2.48e-18,4;UBERON:0000305,9.37e-17,7;UBERON:0004871,1.26e-14,8;UBERON:0004923,1.28e-07,66;UBERON:0000920,1.82e-07,3 | |||
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| ||
|short_description=p10@BC017277 | |short_description=p10@BC017277 | ||
}} | }} |
Latest revision as of 21:03, 23 July 2015
Short description: | p10@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 0bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.36e-32 | 19 |
placental epithelial cell | 3.57e-14 | 3 |
amniotic epithelial cell | 2.43e-10 | 2 |
central nervous system pericyte | 2.55e-10 | 2 |
amnion mesenchymal stem cell | 3.70e-09 | 5 |
chorionic membrane mesenchymal stem cell | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.44e-38 | 14 |
membranous layer | 3.44e-38 | 14 |
extraembryonic structure | 1.20e-34 | 24 |
chorion | 2.23e-23 | 7 |
placenta | 2.48e-18 | 4 |
allantois | 2.48e-18 | 4 |
amnion | 9.37e-17 | 7 |
somatic layer of lateral plate mesoderm | 1.26e-14 | 8 |
organ component layer | 1.28e-07 | 66 |
egg chorion | 1.82e-07 | 3 |