FFCP PHASE1:Hg19::chr11:2016915..2016943,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283120 | |EntrezGene=283120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-112bp_to_BC010185_5end | |association_with_transcript=-112bp_to_BC010185_5end | ||
|cluster_id=chr11:2016915..2016943,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_24_at_H19_5end | |description=CAGE_peak_24_at_H19_5end | ||
|id=chr11:2016915..2016943,- | |id=chr11:2016915..2016943,- | ||
|ontology_enrichment_celltype=CL:0000188!1.39e-07!9 | |ontology_enrichment_celltype=CL:0000188!1.39e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.50e-18;19!CL:0000680;5.48e-11;7!CL:0000056;2.28e-09;4!CL:0002577;5.53e-09;3!CL:0002541;1.15e-08;3!CL:0000188;3.19e-08;9!CL:0000515;1.40e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.28e-18,19;CL:0000515,2.45e-09,4;CL:0002577,5.61e-09,3;CL:0002541,1.01e-08,3;CL:0000188,3.34e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000515;2.28e-09;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.02e-13!14;UBERON:0000158!1.02e-13!14;UBERON:0000478!6.25e-12!24;UBERON:0001737!7.75e-12!9;UBERON:0001557!7.69e-11!19;UBERON:0003124!2.73e-10!7;UBERON:0004923!6.87e-10!57;UBERON:0003104!3.63e-09!238;UBERON:0009142!3.63e-09!238;UBERON:0000481!1.37e-07!347;UBERON:0004921!2.40e-07!129;UBERON:0004185!2.40e-07!129;UBERON:0000077!2.74e-07!130;UBERON:0004119!4.20e-07!169;UBERON:0000925!4.20e-07!169;UBERON:0006595!4.20e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.42e-21;16!UBERON:0002036;1.42e-21;16!UBERON:0001737;4.72e-21;9!UBERON:0001557;4.72e-21;9!UBERON:0000478;6.70e-19;24!UBERON:0005631;2.19e-16;10!UBERON:0000158;2.19e-16;10!UBERON:0001987;3.97e-11;4!UBERON:0000305;8.22e-10;7!UBERON:0002385;1.37e-09;31!UBERON:0001015;1.37e-09;31!UBERON:0000383;1.37e-09;31!UBERON:0003124;1.15e-08;3!UBERON:0000920;1.15e-08;3!UBERON:0001723;2.09e-08;3!UBERON:0001033;2.09e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.40e-25,14;UBERON:0000158,1.40e-25,14;UBERON:0001737,4.47e-21,9;UBERON:0000478,6.36e-19,24;UBERON:0003124,3.91e-18,7;UBERON:0001557,2.01e-16,19;UBERON:0001987,4.09e-11,4;UBERON:0004340,4.09e-11,4;UBERON:0000305,8.24e-10,7;UBERON:0000920,1.01e-08,3;UBERON:0004871,1.63e-08,8;UBERON:0001723,2.15e-08,3;UBERON:0001033,2.15e-08,3;UBERON:0010056,2.15e-08,3;UBERON:0000072,3.28e-08,47;UBERON:0004119,3.36e-07,160;UBERON:0000925,3.36e-07,160;UBERON:0006595,3.36e-07,160;UBERON:0004923,7.36e-07,66 | |||
|phase1_expression=1.99846217197612,0,0.422863212287913,1.0007329835313,0.446961094427288,8.72338524100369,0,0,0,0,0.697801167972428,15.2908960491121,10.5506791291381,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,0,0,0,0,0,2.91980922181582,0,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0.311211035399766,0,0.163461903113459,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,1.04574548582567,0.725627385107593,0,0,0,0,0,0,0,5.67872640191251,2.69735504124963,4.33819853790268,5.07352274569012,4.79334777003293,4.98268300133303,5.52808363456674,5.101758093259,3.8474715694639,0,0,2.057870056657,5.88034845542168,0,0,1.77236972004421,0,0,0,0,0,0,1.66659201285353,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,32.0146747180951,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,2.31650090668127,2.4657158706046,2.68591444859843,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0,0,0,0,0.902838299183157,0,2.0694614258501,0,0,0,9.98585903059977,13.7257369524342,0,0,0,21.2189300012382,23.3009615314696,13.9099534931653,0.744323423456331,0,0.841980283299221,0.512556597022804,1.53512174720011,0.482561763430822,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,2.00675909541941,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.386682873168488,0.616194468458578,1.5350367472613,1.10269257987624,0,1.45016693914229,1.44885266607372,3.91740956845644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949138274156178,0,0,6.41908482050881,0,0,0,0.274537029736055,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0.143411352204052,0.589494246078727,0,0,0.211107635297664,0,0.75894634753143,0.349934720244983,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,41.7802848290957,23.7571744666111,66.6538723555334,0,0,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,4.57763986489838,1.73835795075213,24.2440881396259,2.93112298885959,76.7570077466834,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0,44.1417706014334,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0.0967563312890851,0,0,0.484945082442097,0,1.58186518546373,0,0,0,0.977756913674015,0,0,18.1826744719739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,1.43574604915363,0.399358000997982,0,0.89268582976749,0.940568614814168,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.629455057619977,0,0,0,0,3.31045985182716,0.5085370753095,0,0,0,0,0,0,0,0.879313402068495,23.8512400041998,0,0,0,0,0,0.314408610199332,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.200360940621,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,1.29389773676018,0,0.764467467344097,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,5.77628330751691,0,0,0,0.225630985047772,0,0,11.0000811682197,0,0.739280431085226,0,0,0,0,0,0,2.97726707033577,0,0.127762427639595,0,0,0,0,4.61252324845722,0,0.171488009437418,0,0,0,0,0.078493092850514,0,6.16598759290336,11.8710633666234,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,1.69354820076372,1.3746412112643,0,0,0,0,0,4.53200186031526,2.15591894398119,4.6392577253528,2.4285549652957,0,0,0,0,0,0,0,1.31135736302374,0,0.245148321753905,0.235676547101626,0,0,0,0,0,0.902410431630081,0,0.892769693028288,0,0,2.92134555298607,0.917458566809082,0,0.157771562193185,0,0,8.46442944824641,0,0,4.75889218336168,0,0.218531143927391,0,0.305966489225945,0,0,0,1.06090177505535,0.267964130156178,0,0,0.852935927603924,3.57096647195611,0,0.186224142887574,0,0.0636471582781649,3.84022659020617,3.26575121845442,20.1917647640316,0.26940821205835,0.143444410785353,3.32660356546013,0.0814032686109745,0,0,0,14.0784565442073,0.366724332548599,0.406896178315738,0,1.00636896795513,0 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|phase1_expression=1.99846217197612,0,0.422863212287913,1.0007329835313,0.446961094427288,8.72338524100369,0,0,0,0,0.697801167972428,15.2908960491121,10.5506791291381,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,0,0,0,0,0,2.91980922181582,0,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0.311211035399766,0,0.163461903113459,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,1.04574548582567,0.725627385107593,0,0,0,0,0,0,0,5.67872640191251,2.69735504124963,4.33819853790268,5.07352274569012,4.79334777003293,4.98268300133303,5.52808363456674,5.101758093259,3.8474715694639,0,0,2.057870056657,5.88034845542168,0,0,1.77236972004421,0,0,0,0,0,0,1.66659201285353,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,32.0146747180951,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,2.31650090668127,2.4657158706046,2.68591444859843,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0,0,0,0,0.902838299183157,0,2.0694614258501,0,0,0,9.98585903059977,13.7257369524342,0,0,0,21.2189300012382,23.3009615314696,13.9099534931653,0.744323423456331,0,0.841980283299221,0.512556597022804,1.53512174720011,0.482561763430822,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,2.00675909541941,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.386682873168488,0.616194468458578,1.5350367472613,1.10269257987624,0,1.45016693914229,1.44885266607372,3.91740956845644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949138274156178,0,0,6.41908482050881,0,0,0,0.274537029736055,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0.143411352204052,0.589494246078727,0,0,0.211107635297664,0,0.75894634753143,0.349934720244983,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,41.7802848290957,23.7571744666111,66.6538723555334,0,0,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,4.57763986489838,1.73835795075213,24.2440881396259,2.93112298885959,76.7570077466834,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0,44.1417706014334,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0.0967563312890851,0,0,0.484945082442097,0,1.58186518546373,0,0,0,0.977756913674015,0,0,18.1826744719739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,1.43574604915363,0.399358000997982,0,0.89268582976749,0.940568614814168,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.629455057619977,0,0,0,0,3.31045985182716,0.5085370753095,0,0,0,0,0,0,0,0.879313402068495,23.8512400041998,0,0,0,0,0,0.314408610199332,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.200360940621,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,1.29389773676018,0,0.764467467344097,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,5.77628330751691,0,0,0,0.225630985047772,0,0,11.0000811682197,0,0.739280431085226,0,0,0,0,0,0,2.97726707033577,0,0.127762427639595,0,0,0,0,4.61252324845722,0,0.171488009437418,0,0,0,0,0.078493092850514,0,6.16598759290336,11.8710633666234,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,1.69354820076372,1.3746412112643,0,0,0,0,0,4.53200186031526,2.15591894398119,4.6392577253528,2.4285549652957,0,0,0,0,0,0,0,1.31135736302374,0,0.245148321753905,0.235676547101626,0,0,0,0,0,0.902410431630081,0,0.892769693028288,0,0,2.92134555298607,0.917458566809082,0,0.157771562193185,0,0,8.46442944824641,0,0,4.75889218336168,0,0.218531143927391,0,0.305966489225945,0,0,0,1.06090177505535,0.267964130156178,0,0,0.852935927603924,3.57096647195611,0,0.186224142887574,0,0.0636471582781649,3.84022659020617,3.26575121845442,20.1917647640316,0.26940821205835,0.143444410785353,3.32660356546013,0.0814032686109745,0,0,0,14.0784565442073,0.366724332548599,0.406896178315738,0,1.00636896795513,0 | ||
|short_description=p24@H19 | |short_description=p24@H19 | ||
}} | }} |
Latest revision as of 06:15, 17 September 2015
Short description: | p24@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -112bp_to_BC010185_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.28e-18 | 19 |
skeletal muscle myoblast | 2.45e-09 | 4 |
placental epithelial cell | 5.61e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.01e-08 | 3 |
cell of skeletal muscle | 3.34e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.40e-25 | 14 |
membranous layer | 1.40e-25 | 14 |
larynx | 4.47e-21 | 9 |
extraembryonic structure | 6.36e-19 | 24 |
chorion | 3.91e-18 | 7 |
upper respiratory tract | 2.01e-16 | 19 |
placenta | 4.09e-11 | 4 |
allantois | 4.09e-11 | 4 |
amnion | 8.24e-10 | 7 |
egg chorion | 1.01e-08 | 3 |
somatic layer of lateral plate mesoderm | 1.63e-08 | 8 |
tongue | 2.15e-08 | 3 |
gustatory system | 2.15e-08 | 3 |
future tongue | 2.15e-08 | 3 |
segment of respiratory tract | 3.28e-08 | 47 |
endoderm-derived structure | 3.36e-07 | 160 |
endoderm | 3.36e-07 | 160 |
presumptive endoderm | 3.36e-07 | 160 |
organ component layer | 7.36e-07 | 66 |