FFCP PHASE1:Hg19::chr15:78466862..78466878,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23205 | |EntrezGene=23205 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29567 | |HGNC=29567 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=275bp_to_ENST00000560183_5end | |association_with_transcript=275bp_to_ENST00000560183_5end | ||
|cluster_id=chr15:78466862..78466878,- | |||
|coexpression_cluster_id=C1213 | |||
|description=CAGE_peak_4_at_ACSBG1_5end | |description=CAGE_peak_4_at_ACSBG1_5end | ||
|id=chr15:78466862..78466878,- | |id=chr15:78466862..78466878,- | ||
|ontology_enrichment_celltype=CL:0000784!1.43e-38!3;CL:0000946!1.83e-13!1;CL:0000786!1.83e-13!1;CL:0000980!1.83e-13!1;CL:0000451!5.33e-11!10;CL:0000785!2.25e-07!2;CL:0000955!2.25e-07!2;CL:0000818!2.25e-07!2;CL:0000954!2.25e-07!2;CL:0000816!2.25e-07!2 | |ontology_enrichment_celltype=CL:0000784!1.43e-38!3;CL:0000946!1.83e-13!1;CL:0000786!1.83e-13!1;CL:0000980!1.83e-13!1;CL:0000451!5.33e-11!10;CL:0000785!2.25e-07!2;CL:0000955!2.25e-07!2;CL:0000818!2.25e-07!2;CL:0000954!2.25e-07!2;CL:0000816!2.25e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000784;3.75e-53;3!CL:0000451;2.17e-15;10!CL:0000840;6.55e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.87e-53,3;CL:0000451,2.02e-15,10;CL:0000840,6.78e-08,5;CL:0001029,6.78e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006965;5.15e-21;2!UBERON:0004872;5.86e-07;7 | |||
|ontology_enrichment_disease=DOID:630!7.55e-14!1;DOID:0050177!7.55e-14!1;DOID:0050427!7.55e-14!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.38e-17!7;UBERON:0002370!8.59e-14!4;UBERON:0005058!8.59e-14!4;UBERON:0009113!8.59e-14!4;UBERON:0003295!8.59e-14!4;UBERON:0005562!8.59e-14!4;UBERON:0002372!2.07e-13!1;UBERON:0001961!2.07e-13!1;UBERON:0001744!2.07e-13!1;UBERON:0001735!2.07e-13!1;UBERON:0000974!5.01e-12!10;UBERON:0001042!6.50e-12!10;UBERON:0009145!6.50e-12!10;UBERON:0006562!6.98e-11!11;UBERON:0003351!1.68e-09!6;UBERON:0000341!1.54e-07!2;UBERON:0002360!1.64e-07!2;UBERON:0000094!1.64e-07!2;UBERON:0007645!1.64e-07!2;UBERON:0001876!1.87e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.91e-79;2!UBERON:0005058;1.91e-79;2!UBERON:0009113;1.91e-79;2!UBERON:0004177;1.33e-32;5!UBERON:0005057;1.33e-32;5!UBERON:0000077;6.72e-07;27!UBERON:0002405;6.72e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.81e-40,4;UBERON:0005058,1.81e-40,4;UBERON:0009113,1.81e-40,4;UBERON:0003295,1.81e-40,4;UBERON:0005562,1.81e-40,4;UBERON:0003351,2.08e-27,6;UBERON:0004177,1.14e-23,7;UBERON:0005057,1.14e-23,7;UBERON:0000974,6.39e-17,10;UBERON:0003408,6.39e-17,10;UBERON:0001042,6.39e-17,10;UBERON:0009145,6.39e-17,10;UBERON:0006562,1.74e-15,11;UBERON:0009722,1.74e-15,11;UBERON:0007690,1.74e-15,11;UBERON:0008814,7.10e-10,18;UBERON:0001557,2.08e-09,19 | |||
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|short_description=p4@ACSBG1 | |short_description=p4@ACSBG1 | ||
}} | }} |
Latest revision as of 06:39, 19 September 2015
Short description: | p4@ACSBG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACSBG1_5end |
Coexpression cluster: | C1213_thymus_Dendritic_CD4_non_chronic_vein_CD133 |
Association with transcript: | 275bp_to_ENST00000560183_5end |
EntrezGene: | ACSBG1 |
HGNC: | 29567 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.87e-53 | 3 |
dendritic cell | 2.02e-15 | 10 |
immature conventional dendritic cell | 6.78e-08 | 5 |
common dendritic progenitor | 6.78e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.81e-40 | 4 |
hemolymphoid system gland | 1.81e-40 | 4 |
thymic region | 1.81e-40 | 4 |
pharyngeal gland | 1.81e-40 | 4 |
thymus primordium | 1.81e-40 | 4 |
pharyngeal epithelium | 2.08e-27 | 6 |
hemopoietic organ | 1.14e-23 | 7 |
immune organ | 1.14e-23 | 7 |
neck | 6.39e-17 | 10 |
gland of gut | 6.39e-17 | 10 |
chordate pharynx | 6.39e-17 | 10 |
pharyngeal region of foregut | 6.39e-17 | 10 |
pharynx | 1.74e-15 | 11 |
entire pharyngeal arch endoderm | 1.74e-15 | 11 |
early pharyngeal endoderm | 1.74e-15 | 11 |
pharyngeal arch system | 7.10e-10 | 18 |
upper respiratory tract | 2.08e-09 | 19 |