FFCP PHASE1:Hg19::chr10:123779150..123779177,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:123779150..123779177,+
|short_description=p20@TACC2
|description=CAGE_peak_20_at_TACC2_5end
|association_with_transcript=-85bp_to_ENST00000489754_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10579 | |EntrezGene=10579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11523 | |HGNC=11523 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-85bp_to_ENST00000489754_5end | |||
|cluster_id=chr10:123779150..123779177,+ | |||
|description=CAGE_peak_20_at_TACC2_5end | |||
|id=chr10:123779150..123779177,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.31e-07;1!CL:0000164;1.31e-07;1!CL:0000502;1.31e-07;1!CL:0000172;1.31e-07;1!CL:0000173;1.31e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.27e-07,1;CL:0000164,1.27e-07,1;CL:0000502,1.27e-07,1;CL:0000172,1.27e-07,1;CL:0000173,1.27e-07,1;CL:0002351,1.27e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.31e-07;1!UBERON:0006298;1.58e-07;1!UBERON:0009143;2.03e-07;1!UBERON:0008801;2.03e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.13e-10!106;DOID:0050687!7.66e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.02e-07;1!DOID:1357;1.02e-07;1!DOID:4430;1.31e-07;1!DOID:3151;4.33e-07;1!DOID:178;4.33e-07;1!DOID:326;4.33e-07;1!DOID:3978;4.33e-07;1!DOID:3394;4.33e-07;1!DOID:5844;4.33e-07;1!DOID:3149;4.33e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.91e-08,1;DOID:1357,9.91e-08,1;DOID:4430,1.27e-07,1;DOID:178,2.84e-07,1;DOID:326,2.84e-07,1;DOID:3978,2.84e-07,1;DOID:3394,2.84e-07,1;DOID:5844,2.84e-07,1;DOID:3151,4.08e-07,1;DOID:3149,4.08e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.15e-15!155;UBERON:0001555!3.15e-15!155;UBERON:0007026!3.15e-15!155;UBERON:0004119!3.30e-14!169;UBERON:0000925!3.30e-14!169;UBERON:0006595!3.30e-14!169;UBERON:0004921!1.78e-13!129;UBERON:0004185!1.78e-13!129;UBERON:0000077!7.78e-12!130;UBERON:0000161!4.23e-10!35;UBERON:0007023!5.51e-10!115;UBERON:0001004!8.19e-09!72;UBERON:0003408!1.53e-08!10;UBERON:0001044!3.82e-08!6;UBERON:0003293!3.82e-08!6;UBERON:0003294!3.82e-08!6;UBERON:0010047!3.82e-08!6;UBERON:0000167!3.82e-08!6;UBERON:0001041!4.30e-08!98;UBERON:0000166!9.88e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001041;1.96e-20;14!UBERON:0001044;1.27e-16;6!UBERON:0003293;1.27e-16;6!UBERON:0003294;1.27e-16;6!UBERON:0010047;1.27e-16;6!UBERON:0003408;1.27e-16;6!UBERON:0000167;1.27e-16;6!UBERON:0001829;2.87e-13;2!UBERON:0001905;4.01e-13;2!UBERON:0002757;4.01e-13;2!UBERON:0010134;4.01e-13;2!UBERON:0005408;4.01e-13;2!UBERON:0001899;4.01e-13;2!UBERON:0004921;2.05e-10;33!UBERON:0000161;8.67e-08;19!UBERON:0000166;8.67e-08;19!UBERON:0001764;1.02e-07;1!UBERON:0001825;1.02e-07;1!UBERON:0001736;1.58e-07;1!UBERON:0001831;2.03e-07;1!UBERON:0001567;2.03e-07;1!UBERON:0002372;4.33e-07;1!UBERON:0001961;4.33e-07;1!UBERON:0001744;4.33e-07;1!UBERON:0001042;4.33e-07;1!UBERON:0001735;4.33e-07;1!UBERON:0003296;5.60e-07;4!UBERON:0010133;5.60e-07;4!UBERON:0002784;5.60e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.38e-16,6;UBERON:0003293,1.38e-16,6;UBERON:0003294,1.38e-16,6;UBERON:0010047,1.38e-16,6;UBERON:0000167,1.38e-16,6;UBERON:0001829,2.71e-13,2;UBERON:0001905,7.13e-13,2;UBERON:0002757,7.13e-13,2;UBERON:0010134,7.13e-13,2;UBERON:0005408,7.13e-13,2;UBERON:0001899,7.13e-13,2;UBERON:0003408,5.31e-10,10;UBERON:0002530,2.72e-08,59;UBERON:0001764,9.91e-08,1;UBERON:0001825,9.91e-08,1;UBERON:0001736,1.63e-07,1;UBERON:0006298,1.63e-07,1;UBERON:0001831,1.85e-07,1;UBERON:0001567,1.85e-07,1;UBERON:0008801,1.85e-07,1;UBERON:0000161,3.23e-07,36;UBERON:0002372,6.57e-07,1;UBERON:0001961,6.57e-07,1;UBERON:0001744,6.57e-07,1;UBERON:0001735,6.57e-07,1;UBERON:0003296,7.42e-07,4;UBERON:0010133,7.42e-07,4;UBERON:0002784,7.42e-07,4 | |||
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| ||
|short_description=p20@TACC2 | |||
}} | }} |
Latest revision as of 19:43, 16 September 2015
Short description: | p20@TACC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_TACC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -85bp_to_ENST00000489754_5end |
EntrezGene: | TACC2 |
HGNC: | 11523 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.27e-07 | 1 |
enteroendocrine cell | 1.27e-07 | 1 |
type D enteroendocrine cell | 1.27e-07 | 1 |
somatostatin secreting cell | 1.27e-07 | 1 |
pancreatic D cell | 1.27e-07 | 1 |
progenitor cell of endocrine pancreas | 1.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.38e-16 | 6 |
gland of oral region | 1.38e-16 | 6 |
gland of foregut | 1.38e-16 | 6 |
oral gland | 1.38e-16 | 6 |
oral cavity | 1.38e-16 | 6 |
major salivary gland | 2.71e-13 | 2 |
pineal body | 7.13e-13 | 2 |
regional part of epithalamus | 7.13e-13 | 2 |
secretory circumventricular organ | 7.13e-13 | 2 |
circumventricular organ | 7.13e-13 | 2 |
epithalamus | 7.13e-13 | 2 |
gland of gut | 5.31e-10 | 10 |
gland | 2.72e-08 | 59 |
maxillary sinus | 9.91e-08 | 1 |
paranasal sinus | 9.91e-08 | 1 |
submandibular gland | 1.63e-07 | 1 |
submandibular gland primordium | 1.63e-07 | 1 |
parotid gland | 1.85e-07 | 1 |
cheek | 1.85e-07 | 1 |
parotid gland primordium | 1.85e-07 | 1 |
orifice | 3.23e-07 | 36 |
tonsil | 6.57e-07 | 1 |
mucosa-associated lymphoid tissue | 6.57e-07 | 1 |
lymphoid tissue | 6.57e-07 | 1 |
tonsillar ring | 6.57e-07 | 1 |
gland of diencephalon | 7.42e-07 | 4 |
neuroendocrine gland | 7.42e-07 | 4 |
regional part of diencephalon | 7.42e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.91e-08 | 1 |
maxillary sinus cancer | 9.91e-08 | 1 |
somatostatinoma | 1.27e-07 | 1 |
vascular disease | 2.84e-07 | 1 |
ischemia | 2.84e-07 | 1 |
extrinsic cardiomyopathy | 2.84e-07 | 1 |
myocardial ischemia | 2.84e-07 | 1 |
myocardial infarction | 2.84e-07 | 1 |
skin squamous cell carcinoma | 4.08e-07 | 1 |
keratoacanthoma | 4.08e-07 | 1 |