FFCP PHASE1:Hg19::chr11:116409213..116409239,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:116409213..116409239,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr11:116409213..116409239,- | |description=CAGE_peak_at_chr11:116409213..116409239,- | ||
|id=chr11:116409213..116409239,- | |id=chr11:116409213..116409239,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.28e-53;3 | |||
|ontology_enrichment_disease=DOID:3093!2.46e-08!11 | |ontology_enrichment_disease=DOID:3093!2.46e-08!11 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!2.04e-45!2;UBERON:0002757!2.04e-45!2;UBERON:0010134!2.04e-45!2;UBERON:0002784!2.04e-45!2;UBERON:0005408!2.04e-45!2;UBERON:0001899!2.04e-45!2;UBERON:0003296!2.63e-23!4;UBERON:0010133!2.63e-23!4;UBERON:0000966!1.04e-18!5;UBERON:0005388!1.04e-18!5;UBERON:0001802!1.04e-18!5;UBERON:0000970!5.31e-18!20;UBERON:0002104!3.62e-17!21;UBERON:0000020!1.02e-15!23;UBERON:0001032!4.42e-15!24;UBERON:0004456!4.42e-15!24;UBERON:0001894!8.94e-14!7;UBERON:0006222!8.94e-14!7;UBERON:0000019!4.22e-11!19;UBERON:0000047!4.22e-11!19;UBERON:0004088!4.22e-11!19;UBERON:0003072!4.22e-11!19;UBERON:0003071!4.22e-11!19;UBERON:0004128!4.22e-11!19;UBERON:0001456!4.17e-10!21;UBERON:0003056!4.11e-09!61;UBERON:0005085!1.74e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0000966;2.16e-32;5!UBERON:0005388;2.16e-32;5!UBERON:0001802;2.16e-32;5!UBERON:0001894;1.02e-23;7!UBERON:0000970;1.60e-18;20!UBERON:0002104;1.10e-17;21!UBERON:0000020;3.17e-16;23!UBERON:0001032;1.38e-15;24!UBERON:0004456;1.38e-15;24!UBERON:0000019;2.41e-09;19!UBERON:0000047;2.41e-09;19!UBERON:0004088;2.41e-09;19!UBERON:0010230;2.41e-09;19!UBERON:0001456;1.50e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0000966,3.11e-27,6;UBERON:0005388,3.11e-27,6;UBERON:0001802,3.11e-27,6;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0000970,1.10e-17,21;UBERON:0002104,1.10e-17,21;UBERON:0000020,1.38e-15,24;UBERON:0001032,1.38e-15,24;UBERON:0004456,1.38e-15,24;UBERON:0003056,6.33e-11,61;UBERON:0000019,6.17e-09,20;UBERON:0000047,6.17e-09,20;UBERON:0010312,6.17e-09,20;UBERON:0004088,6.17e-09,20;UBERON:0010230,6.17e-09,20;UBERON:0003072,6.17e-09,20;UBERON:0004128,6.17e-09,20;UBERON:0003071,6.17e-09,20;UBERON:0003075,2.54e-08,82;UBERON:0007284,2.54e-08,82;UBERON:0001456,3.27e-08,22;UBERON:0002346,5.76e-08,86 | |||
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|short_description=p@chr11:116409213..116409239,- | |short_description=p@chr11:116409213..116409239,- | ||
}} | }} |
Latest revision as of 18:27, 23 July 2015
Short description: | p@chr11:116409213..116409239, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:116409213..116409239, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
retina | 3.11e-27 | 6 |
photoreceptor array | 3.11e-27 | 6 |
posterior segment of eyeball | 3.11e-27 | 6 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
eye | 1.10e-17 | 21 |
visual system | 1.10e-17 | 21 |
sense organ | 1.38e-15 | 24 |
sensory system | 1.38e-15 | 24 |
entire sense organ system | 1.38e-15 | 24 |
pre-chordal neural plate | 6.33e-11 | 61 |
camera-type eye | 6.17e-09 | 20 |
simple eye | 6.17e-09 | 20 |
immature eye | 6.17e-09 | 20 |
ocular region | 6.17e-09 | 20 |
eyeball of camera-type eye | 6.17e-09 | 20 |
optic cup | 6.17e-09 | 20 |
optic vesicle | 6.17e-09 | 20 |
eye primordium | 6.17e-09 | 20 |
neural plate | 2.54e-08 | 82 |
presumptive neural plate | 2.54e-08 | 82 |
face | 3.27e-08 | 22 |
neurectoderm | 5.76e-08 | 86 |