FFCP PHASE1:Hg19::chr10:106013815..106013828,+: Difference between revisions
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|id=chr10:106013815..106013828,+
|short_description=p9@GSTO1
|description=CAGE_peak_9_at_GSTO1_5end
|association_with_transcript=-93bp_to_ENST00000493946_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9446 | |EntrezGene=9446 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13312 | |HGNC=13312 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-93bp_to_ENST00000493946_5end | |||
|cluster_id=chr10:106013815..106013828,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_9_at_GSTO1_5end | |||
|id=chr10:106013815..106013828,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.70e-21!5;CL:0000039!9.32e-15!7;CL:0000586!9.32e-15!7 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.11e-66;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.11e-66,12;CL:0000223,1.72e-14,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.65e-72;11!UBERON:0009497;4.89e-61;13!UBERON:0001041;4.24e-27;30!UBERON:0003104;5.84e-26;31!CL:0000223;2.79e-09;58 | |||
|ontology_enrichment_disease=DOID:3095!2.86e-08!22;DOID:2994!2.86e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:7;1.79e-19;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,4.38e-21,39;DOID:305,2.62e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002771!4.30e-12!3;UBERON:0000200!2.38e-10!6;UBERON:0002020!3.23e-09!34;UBERON:0003528!3.23e-09!34;UBERON:0002780!3.84e-09!41;UBERON:0001890!3.84e-09!41;UBERON:0006240!3.84e-09!41;UBERON:0003080!7.02e-09!42;UBERON:0000473!2.02e-08!8;UBERON:0001869!6.39e-08!32;UBERON:0002791!1.21e-07!33;UBERON:0001893!2.20e-07!34;UBERON:0002619!2.34e-07!22;UBERON:0001049!2.51e-07!57;UBERON:0005068!2.51e-07!57;UBERON:0006241!2.51e-07!57;UBERON:0007135!2.51e-07!57;UBERON:0002616!5.26e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.83e-42;19!UBERON:0006925;3.83e-42;19!UBERON:0002423;2.66e-32;25!UBERON:0002365;7.95e-25;31!UBERON:0002330;7.95e-25;31!UBERON:0002368;1.49e-22;33!UBERON:0000949;4.80e-17;43!UBERON:0002417;3.48e-11;58!UBERON:0000916;3.48e-11;58!UBERON:0002530;4.08e-09;57!UBERON:0005172;4.12e-09;52!UBERON:0005173;4.12e-09;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.83e-42,19;UBERON:0006925,3.83e-42,19;UBERON:0008836,3.83e-42,19;UBERON:0008835,1.49e-36,22;UBERON:0003894,1.49e-36,22;UBERON:0009854,5.16e-35,23;UBERON:0007499,2.66e-32,25;UBERON:0009497,2.66e-32,25;UBERON:0000015,2.66e-32,25;UBERON:0002423,2.66e-32,25;UBERON:0006235,2.66e-32,25;UBERON:0004161,2.66e-32,25;UBERON:0009856,4.21e-31,26;UBERON:0002365,2.93e-26,31;UBERON:0002330,2.93e-26,31;UBERON:0002368,2.23e-23,35;UBERON:0000949,2.09e-18,45;UBERON:0003929,1.70e-15,54;UBERON:0005172,1.70e-15,54;UBERON:0005173,1.70e-15,54;UBERON:0002530,2.92e-14,59;UBERON:0002417,4.87e-14,60;UBERON:0000916,4.87e-14,60;UBERON:0005911,1.66e-10,82;UBERON:0001041,5.98e-10,87;UBERON:0005177,1.11e-08,101;UBERON:0009569,6.64e-08,112;UBERON:0003914,1.34e-07,117;UBERON:0004921,1.75e-07,118;UBERON:0005256,2.56e-07,122 | |||
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| ||
|short_description=p9@GSTO1 | |||
}} | }} |
Latest revision as of 05:30, 16 September 2015
Short description: | p9@GSTO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GSTO1_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -93bp_to_ENST00000493946_5end |
EntrezGene: | GSTO1 |
HGNC: | 13312 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.11e-66 | 12 |
endodermal cell | 1.72e-14 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.83e-42 | 19 |
digestive gland | 3.83e-42 | 19 |
liver bud | 3.83e-42 | 19 |
hepatic diverticulum | 1.49e-36 | 22 |
liver primordium | 1.49e-36 | 22 |
digestive tract diverticulum | 5.16e-35 | 23 |
epithelial sac | 2.66e-32 | 25 |
epithelium of foregut-midgut junction | 2.66e-32 | 25 |
anatomical boundary | 2.66e-32 | 25 |
hepatobiliary system | 2.66e-32 | 25 |
foregut-midgut junction | 2.66e-32 | 25 |
septum transversum | 2.66e-32 | 25 |
sac | 4.21e-31 | 26 |
exocrine gland | 2.93e-26 | 31 |
exocrine system | 2.93e-26 | 31 |
endocrine gland | 2.23e-23 | 35 |
endocrine system | 2.09e-18 | 45 |
gut epithelium | 1.70e-15 | 54 |
abdomen element | 1.70e-15 | 54 |
abdominal segment element | 1.70e-15 | 54 |
gland | 2.92e-14 | 59 |
abdominal segment of trunk | 4.87e-14 | 60 |
abdomen | 4.87e-14 | 60 |
endo-epithelium | 1.66e-10 | 82 |
foregut | 5.98e-10 | 87 |
trunk region element | 1.11e-08 | 101 |
subdivision of trunk | 6.64e-08 | 112 |
epithelial tube | 1.34e-07 | 117 |
subdivision of digestive tract | 1.75e-07 | 118 |
trunk mesenchyme | 2.56e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 4.38e-21 | 39 |
carcinoma | 2.62e-08 | 106 |