FFCP PHASE1:Mm9::chr7:129363211..129363218,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70261 | |EntrezGene=70261 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q0VEK2 | |UniProt=Q0VEK2 | ||
|association_with_transcript=201bp_to_ENSMUST00000033152,NM_027363,uc009jos.1_5end | |association_with_transcript=201bp_to_ENSMUST00000033152,NM_027363,uc009jos.1_5end | ||
|cluster_id=chr7:129363211..129363218,+ | |||
|description=CAGE_peak_5_at_2010110P09Rik_5end | |description=CAGE_peak_5_at_2010110P09Rik_5end | ||
|id=chr7:129363211..129363218,+ | |id=chr7:129363211..129363218,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.06e-13,6;CL:0000677,1.06e-13,6;CL:0000584,1.06e-13,6;CL:0000075,1.22e-11,7;CL:0002563,6.89e-09,9;CL:0002251,6.89e-09,9;CL:0000682,3.65e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.29e-10!59;UBERON:0000160!3.71e-09!43;UBERON:0000344!4.30e-08!15;UBERON:0004119!3.85e-07!130;UBERON:0000925!3.85e-07!130;UBERON:0006595!3.85e-07!130;UBERON:0001007!4.20e-07!128;UBERON:0001555!4.20e-07!128;UBERON:0007026!4.20e-07!128;UBERON:0004923!6.86e-07!24;UBERON:0001242!9.52e-07!13;UBERON:0000060!9.52e-07!13;UBERON:0001262!9.52e-07!13;UBERON:0004786!9.52e-07!13 | |ontology_enrichment_uberon=UBERON:0005409!8.29e-10!59;UBERON:0000160!3.71e-09!43;UBERON:0000344!4.30e-08!15;UBERON:0004119!3.85e-07!130;UBERON:0000925!3.85e-07!130;UBERON:0006595!3.85e-07!130;UBERON:0001007!4.20e-07!128;UBERON:0001555!4.20e-07!128;UBERON:0007026!4.20e-07!128;UBERON:0004923!6.86e-07!24;UBERON:0001242!9.52e-07!13;UBERON:0000060!9.52e-07!13;UBERON:0001262!9.52e-07!13;UBERON:0004786!9.52e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.68e-36,31;UBERON:0005409,2.68e-26,47;UBERON:0000344,1.19e-20,15;UBERON:0001242,7.85e-17,13;UBERON:0001262,7.85e-17,13;UBERON:0004786,7.85e-17,13;UBERON:0001007,1.03e-12,116;UBERON:0001555,1.03e-12,116;UBERON:0007026,1.03e-12,116;UBERON:0004119,2.23e-12,118;UBERON:0000925,2.23e-12,118;UBERON:0006595,2.23e-12,118;UBERON:0004923,7.03e-12,24;UBERON:0004921,7.10e-11,114;UBERON:0002108,4.48e-10,4;UBERON:0003350,6.89e-09,9;UBERON:0004808,6.89e-09,9;UBERON:0001277,6.89e-09,9;UBERON:0000331,5.94e-08,3;UBERON:0002116,5.94e-08,3;UBERON:0001204,5.94e-08,3;UBERON:0001168,5.94e-08,3;UBERON:0000485,3.88e-07,11 | |||
|phase1_expression=0,5.58360652222978,5.91499011206397,12.7034968748869,9.5170188689806,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,2.3998863419011,2.75291137280604,9.18771142584032,8.18447792702242,2.80112602491656,10.2612646506442,7.30887376303799,1.55211357458713,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.91347103775248,0.776813650941515,0,0,0,0.230615497256059,0,0,0,0,0.722996784599558,0,0.161766849947409,0.441683036920787,0,1.86391761218122,0,0,9.70736809792647,0,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0.497627882440372,0,0.210441855886474,0,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.243206428637567,0.438599962275997,0.658650345873152,0.402619256281115,0.210289948564127,0,20.1555457620117,7.1401652999157,0.213288250535234,0,0,0.605050573870028,0.22237804384487,2.85338439168839,8.0669940462567,2.9645811850322,2.01068167040216,1.39269530428806,2.72949721966768,7.19055526923377,14.4812493416045,7.76650965692032,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0.863088412352432,0.162135226775035,0.549122826376163,1.43768206527355,2.23284568601102,0.312037673114561,1.01031551178845,0.717589654087649,0,0,0,0,0,0.234690248288502,0.335012514883631,0,0.195133647857799,0.315270288212382,0.44292937929755,0.637819074629948,0,0.345369963731791,0.289298117163023,0,0,1.96705709207614,1.10374698521893,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0,1.03371317267288,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0.469343416127421,0,0.441056796109924,0.8244312647074,0.968786560175433,0.482503399425247,0.477489376012546,0.820704498725306,6.12109756922687,0,0,0.619160603889667,0,0.753473828018764,0.136694227721025,0.915112692826091,0,0,0,0,0,0,0.108005340821801,0.418176592028937,1.09181281873089,0,0.41326727862668,0.523511883968059,2.72191443912765,0.621339313086926,0,0.299033092087958,0.66183396182839,0.194451188344048,0.904118764344118,1.01373675294467,1.17357238645754,0.651021924219751,0.629156066554265,0.483168241652012,0.288030006257865,0.632022241256357,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0.467507608726276,0,0,0,0,1.15913756419314,1.12609485270709,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.618105171716683,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.34461281373368,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0,0.394017929502254,0,0.154936841185966,0.192906610981141,0.249810577937946,0.701794825336225,0.859484216193193,0.57386499620653,0.661774257358546,0 | |phase1_expression=0,5.58360652222978,5.91499011206397,12.7034968748869,9.5170188689806,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,2.3998863419011,2.75291137280604,9.18771142584032,8.18447792702242,2.80112602491656,10.2612646506442,7.30887376303799,1.55211357458713,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.91347103775248,0.776813650941515,0,0,0,0.230615497256059,0,0,0,0,0.722996784599558,0,0.161766849947409,0.441683036920787,0,1.86391761218122,0,0,9.70736809792647,0,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0.497627882440372,0,0.210441855886474,0,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.243206428637567,0.438599962275997,0.658650345873152,0.402619256281115,0.210289948564127,0,20.1555457620117,7.1401652999157,0.213288250535234,0,0,0.605050573870028,0.22237804384487,2.85338439168839,8.0669940462567,2.9645811850322,2.01068167040216,1.39269530428806,2.72949721966768,7.19055526923377,14.4812493416045,7.76650965692032,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0.863088412352432,0.162135226775035,0.549122826376163,1.43768206527355,2.23284568601102,0.312037673114561,1.01031551178845,0.717589654087649,0,0,0,0,0,0.234690248288502,0.335012514883631,0,0.195133647857799,0.315270288212382,0.44292937929755,0.637819074629948,0,0.345369963731791,0.289298117163023,0,0,1.96705709207614,1.10374698521893,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0,1.03371317267288,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0.469343416127421,0,0.441056796109924,0.8244312647074,0.968786560175433,0.482503399425247,0.477489376012546,0.820704498725306,6.12109756922687,0,0,0.619160603889667,0,0.753473828018764,0.136694227721025,0.915112692826091,0,0,0,0,0,0,0.108005340821801,0.418176592028937,1.09181281873089,0,0.41326727862668,0.523511883968059,2.72191443912765,0.621339313086926,0,0.299033092087958,0.66183396182839,0.194451188344048,0.904118764344118,1.01373675294467,1.17357238645754,0.651021924219751,0.629156066554265,0.483168241652012,0.288030006257865,0.632022241256357,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0.467507608726276,0,0,0,0,1.15913756419314,1.12609485270709,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.618105171716683,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.34461281373368,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0,0.394017929502254,0,0.154936841185966,0.192906610981141,0.249810577937946,0.701794825336225,0.859484216193193,0.57386499620653,0.661774257358546,0 | ||
|short_description=p5@2010110P09Rik | |short_description=p5@2010110P09Rik | ||
}} | }} |
Latest revision as of 19:59, 25 September 2015
Short description: | p5@2010110P09Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_2010110P09Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 201bp_to_ENSMUST00000033152, NM_027363, uc009jos.1_5end |
EntrezGene: | 2010110P09Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.06e-13 | 6 |
gut absorptive cell | 1.06e-13 | 6 |
enterocyte | 1.06e-13 | 6 |
columnar/cuboidal epithelial cell | 1.22e-11 | 7 |
intestinal epithelial cell | 6.89e-09 | 9 |
epithelial cell of alimentary canal | 6.89e-09 | 9 |
M cell of gut | 3.65e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.68e-36 | 31 |
gastrointestinal system | 2.68e-26 | 47 |
mucosa | 1.19e-20 | 15 |
intestinal mucosa | 7.85e-17 | 13 |
wall of intestine | 7.85e-17 | 13 |
gastrointestinal system mucosa | 7.85e-17 | 13 |
digestive system | 1.03e-12 | 116 |
digestive tract | 1.03e-12 | 116 |
primitive gut | 1.03e-12 | 116 |
endoderm-derived structure | 2.23e-12 | 118 |
endoderm | 2.23e-12 | 118 |
presumptive endoderm | 2.23e-12 | 118 |
organ component layer | 7.03e-12 | 24 |
subdivision of digestive tract | 7.10e-11 | 114 |
small intestine | 4.48e-10 | 4 |
epithelium of mucosa | 6.89e-09 | 9 |
gastrointestinal system epithelium | 6.89e-09 | 9 |
intestinal epithelium | 6.89e-09 | 9 |
ileal mucosa | 5.94e-08 | 3 |
ileum | 5.94e-08 | 3 |
mucosa of small intestine | 5.94e-08 | 3 |
wall of small intestine | 5.94e-08 | 3 |
simple columnar epithelium | 3.88e-07 | 11 |