FFCP PHASE1:Hg19::chr15:42131037..42131060,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100137047,100137049,8681 | |EntrezGene=100137047,100137049,8681 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34397,34449,9036 | |HGNC=34397,34449,9036 | ||
|TSSclassifier=strong | |||
|UniProt=P0C869 | |UniProt=P0C869 | ||
|association_with_transcript=26bp_to_ENST00000458483,ENST00000461382,NM_001114633,uc010bco.2_5end | |association_with_transcript=26bp_to_ENST00000458483,ENST00000461382,NM_001114633,uc010bco.2_5end | ||
|cluster_id=chr15:42131037..42131060,+ | |||
|description=CAGE_peak_2_at_JMJD7-PLA2G4B_5end,CAGE_peak_2_at_JMJD7_5end,CAGE_peak_2_at_PLA2G4B_5end | |description=CAGE_peak_2_at_JMJD7-PLA2G4B_5end,CAGE_peak_2_at_JMJD7_5end,CAGE_peak_2_at_PLA2G4B_5end | ||
|id=chr15:42131037..42131060,+ | |id=chr15:42131037..42131060,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.10e-20!43;CL:0002159!4.73e-17!13;CL:0002251!3.91e-15!21;CL:0000223!9.46e-14!59;CL:0002328!1.51e-12!3;CL:0000622!4.27e-12!5;CL:0000362!1.20e-11!8;CL:0002621!1.31e-11!3;CL:0002202!1.70e-10!9;CL:0002632!1.70e-10!9;CL:0000240!3.96e-10!6;CL:0000311!3.96e-10!6;CL:0000079!3.96e-10!6;CL:0000237!3.96e-10!6;CL:0000036!3.96e-10!6;CL:0000357!3.96e-10!6;CL:0000114!3.96e-10!6;CL:0000154!4.35e-10!6;CL:0002368!7.11e-10!13;CL:0000317!1.24e-08!2;CL:1000448!1.24e-08!2;CL:0002308!1.24e-08!2;CL:0002140!1.24e-08!2;CL:0000575!1.61e-08!2;CL:0001014!1.80e-08!2;CL:0001016!1.80e-08!2;CL:0002077!1.44e-07!33;CL:0000312!2.63e-07!5;CL:0000453!3.26e-07!5;CL:0000066!6.03e-07!254;CL:0000150!9.94e-07!9 | |ontology_enrichment_celltype=CL:0002076!2.10e-20!43;CL:0002159!4.73e-17!13;CL:0002251!3.91e-15!21;CL:0000223!9.46e-14!59;CL:0002328!1.51e-12!3;CL:0000622!4.27e-12!5;CL:0000362!1.20e-11!8;CL:0002621!1.31e-11!3;CL:0002202!1.70e-10!9;CL:0002632!1.70e-10!9;CL:0000240!3.96e-10!6;CL:0000311!3.96e-10!6;CL:0000079!3.96e-10!6;CL:0000237!3.96e-10!6;CL:0000036!3.96e-10!6;CL:0000357!3.96e-10!6;CL:0000114!3.96e-10!6;CL:0000154!4.35e-10!6;CL:0002368!7.11e-10!13;CL:0000317!1.24e-08!2;CL:1000448!1.24e-08!2;CL:0002308!1.24e-08!2;CL:0002140!1.24e-08!2;CL:0000575!1.61e-08!2;CL:0001014!1.80e-08!2;CL:0001016!1.80e-08!2;CL:0002077!1.44e-07!33;CL:0000312!2.63e-07!5;CL:0000453!3.26e-07!5;CL:0000066!6.03e-07!254;CL:0000150!9.94e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002328;3.87e-23;3!CL:0000575;2.79e-15;2!CL:0002202;2.04e-13;9!CL:0002632;2.04e-13;9!CL:0002159;5.68e-13;14!CL:0002368;2.44e-09;13!CL:0002252;7.18e-09;1!CL:0002076;1.79e-08;42!CL:0000362;5.08e-08;9!CL:0000622;5.99e-07;5!CL:0000312;8.79e-07;5!CL:0002077;9.01e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,2.46e-23,3;CL:0000575,2.41e-15,2;CL:0002202,1.82e-13,9;CL:0002632,1.82e-13,9;CL:0002159,5.33e-13,14;CL:0002076,3.64e-10,42;CL:0002368,2.26e-09,13;CL:0002252,9.02e-09,1;CL:0000362,5.02e-08,9;CL:0002077,2.21e-07,34;CL:0000223,4.60e-07,58;CL:0000622,6.08e-07,5;CL:0000312,8.66e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.70e-09;1 | |||
|ontology_enrichment_disease=DOID:3493!7.71e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.09e-08;1!DOID:3149;1.09e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.22e-08,1;DOID:3149,1.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!1.36e-15!21;UBERON:0001004!1.31e-13!72;UBERON:0000165!1.36e-13!28;UBERON:0000930!1.36e-13!28;UBERON:0003102!2.75e-13!95;UBERON:0004815!1.51e-12!3;UBERON:0002031!1.51e-12!3;UBERON:0000161!1.93e-12!35;UBERON:0001949!1.31e-11!3;UBERON:0001444!4.83e-10!48;UBERON:0002185!1.65e-09!4;UBERON:0007196!3.01e-09!14;UBERON:0001558!3.01e-09!14;UBERON:0001003!3.60e-09!14;UBERON:0007376!3.60e-09!14;UBERON:0007383!3.60e-09!14;UBERON:0002419!1.24e-08!2;UBERON:0007771!1.24e-08!2;UBERON:0003297!1.24e-08!2;UBERON:0001821!1.24e-08!2;UBERON:0003487!1.24e-08!2;UBERON:0001820!1.24e-08!2;UBERON:0005089!1.24e-08!2;UBERON:0005088!1.24e-08!2;UBERON:0004119!3.65e-08!169;UBERON:0000925!3.65e-08!169;UBERON:0006595!3.65e-08!169;UBERON:0001007!1.23e-07!155;UBERON:0001555!1.23e-07!155;UBERON:0007026!1.23e-07!155;UBERON:0000072!1.33e-07!46;UBERON:0000065!1.55e-07!53;UBERON:0005178!2.32e-07!34;UBERON:0002224!2.32e-07!34;UBERON:0000344!3.28e-07!12;UBERON:0005181!4.20e-07!35;UBERON:0004807!4.32e-07!28;UBERON:0003729!9.71e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.87e-23;3!UBERON:0002031;3.87e-23;3!UBERON:0002185;4.00e-14;5!UBERON:0007196;3.82e-12;15!UBERON:0001558;3.82e-12;15!UBERON:0001723;3.11e-11;3!UBERON:0001033;3.11e-11;3!UBERON:0001043;4.11e-11;3!UBERON:0000485;3.08e-10;7!UBERON:0005178;3.17e-09;34!UBERON:0002224;3.17e-09;34!UBERON:0002372;3.87e-09;1!UBERON:0001961;3.87e-09;1!UBERON:0001744;3.87e-09;1!UBERON:0001042;3.87e-09;1!UBERON:0001735;3.87e-09;1!UBERON:0005181;4.85e-09;35!UBERON:0007029;1.09e-08;1!UBERON:0000014;2.78e-08;4!UBERON:0001003;4.02e-08;15!UBERON:0007376;4.02e-08;15!UBERON:0000964;4.31e-08;4!UBERON:0010409;4.31e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.46e-23,3;UBERON:0002031,2.46e-23,3;UBERON:0002185,3.06e-14,5;UBERON:0007196,3.65e-12,15;UBERON:0001558,3.65e-12,15;UBERON:0001723,3.27e-11,3;UBERON:0001033,3.27e-11,3;UBERON:0010056,3.27e-11,3;UBERON:0001043,4.90e-11,3;UBERON:0009143,4.90e-11,3;UBERON:0003102,3.05e-10,99;UBERON:0005178,6.64e-10,34;UBERON:0002224,6.64e-10,34;UBERON:0005181,1.34e-09,35;UBERON:0002372,3.87e-09,1;UBERON:0001961,3.87e-09,1;UBERON:0001744,3.87e-09,1;UBERON:0001735,3.87e-09,1;UBERON:0000072,4.18e-09,47;UBERON:0007029,9.74e-09,1;UBERON:0001041,1.75e-08,87;UBERON:0001004,2.07e-08,74;UBERON:0000166,2.08e-08,22;UBERON:0000014,2.78e-08,4;UBERON:0001003,3.87e-08,15;UBERON:0007376,3.87e-08,15;UBERON:0007383,3.87e-08,15;UBERON:0000485,3.94e-08,9;UBERON:0000964,4.01e-08,4;UBERON:0010409,4.01e-08,4;UBERON:0004348,4.01e-08,4;UBERON:0005427,4.01e-08,4;UBERON:0000065,8.79e-08,54;UBERON:0001042,1.78e-07,10;UBERON:0009145,1.78e-07,10;UBERON:0000161,5.18e-07,36;UBERON:0004921,7.01e-07,118;UBERON:0006562,7.81e-07,11 | |||
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| ||
|short_description=p2@JMJD7-PLA2G4B,p2@JMJD7,p2@PLA2G4B | |short_description=p2@JMJD7-PLA2G4B,p2@JMJD7,p2@PLA2G4B | ||
}} | }} |
Latest revision as of 15:08, 17 September 2015
Short description: | p2@JMJD7-PLA2G4B, p2@JMJD7, p2@PLA2G4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_JMJD7-PLA2G4B_5end, CAGE_peak_2_at_JMJD7_5end, CAGE_peak_2_at_PLA2G4B_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000458483, ENST00000461382, NM_001114633, uc010bco.2_5end |
EntrezGene: | 100137047,100137049,8681 |
HGNC: | 34449, 9036&submit=Submit 34397, 34449, 9036 |
UniProt: | P0C869 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 2.46e-23 | 3 |
corneal epithelial cell | 2.41e-15 | 2 |
epithelial cell of tracheobronchial tree | 1.82e-13 | 9 |
epithelial cell of lower respiratory tract | 1.82e-13 | 9 |
general ecto-epithelial cell | 5.33e-13 | 14 |
endo-epithelial cell | 3.64e-10 | 42 |
respiratory epithelial cell | 2.26e-09 | 13 |
epithelial cell of esophagus | 9.02e-09 | 1 |
epidermal cell | 5.02e-08 | 9 |
ecto-epithelial cell | 2.21e-07 | 34 |
endodermal cell | 4.60e-07 | 58 |
acinar cell | 6.08e-07 | 5 |
keratinocyte | 8.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.22e-08 | 1 |
keratoacanthoma | 1.22e-08 | 1 |