FFCP PHASE1:Hg19::chr10:103880341..103880357,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:103880341..103880357,-
|short_description=p9@LDB1
|description=CAGE_peak_9_at_LDB1_5end
|association_with_transcript=-131bp_to_ENST00000425280,NM_00111340...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8861 | |EntrezGene=8861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6532 | |HGNC=6532 | ||
|TSSclassifier=strong | |||
|UniProt=Q86U70 | |UniProt=Q86U70 | ||
|association_with_transcript=-131bp_to_ENST00000425280,NM_001113407,uc009xwz.2_5end | |||
|cluster_id=chr10:103880341..103880357,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_9_at_LDB1_5end | |||
|id=chr10:103880341..103880357,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.65e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.43e-24!94;UBERON:0001016!9.43e-24!94;UBERON:0001017!6.18e-23!82;UBERON:0005743!9.27e-23!86;UBERON:0001049!2.69e-22!57;UBERON:0005068!2.69e-22!57;UBERON:0006241!2.69e-22!57;UBERON:0007135!2.69e-22!57;UBERON:0002616!3.69e-21!59;UBERON:0000955!2.30e-20!69;UBERON:0006238!2.30e-20!69;UBERON:0007023!4.21e-20!115;UBERON:0002346!6.02e-18!90;UBERON:0002780!1.29e-17!41;UBERON:0001890!1.29e-17!41;UBERON:0006240!1.29e-17!41;UBERON:0003075!4.21e-17!86;UBERON:0007284!4.21e-17!86;UBERON:0001893!6.56e-17!34;UBERON:0002020!1.00e-16!34;UBERON:0003528!1.00e-16!34;UBERON:0001869!1.19e-16!32;UBERON:0003080!1.24e-16!42;UBERON:0002791!2.67e-16!33;UBERON:0002619!8.25e-15!22;UBERON:0001950!3.25e-14!20;UBERON:0000153!4.53e-14!129;UBERON:0007811!4.53e-14!129;UBERON:0000924!1.25e-13!173;UBERON:0006601!1.25e-13!173;UBERON:0004121!7.10e-13!169;UBERON:0000956!9.13e-13!25;UBERON:0000203!9.13e-13!25;UBERON:0000033!2.05e-12!123;UBERON:0003056!2.19e-11!61;UBERON:0003076!6.77e-07!15;UBERON:0003057!6.77e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.30e-29;20!UBERON:0002619;2.30e-29;22!UBERON:0001869;6.55e-29;32!UBERON:0002791;6.58e-27;32!UBERON:0003528;3.40e-26;34!UBERON:0002020;3.40e-26;34!UBERON:0001893;6.51e-26;34!UBERON:0000956;4.44e-25;25!UBERON:0000203;4.44e-25;25!UBERON:0002780;3.28e-19;41!UBERON:0001890;3.28e-19;41!UBERON:0000073;3.68e-16;53!UBERON:0002616;3.68e-16;53!UBERON:0001017;2.10e-15;75!UBERON:0000955;6.21e-14;68!UBERON:0001016;8.34e-13;83!UBERON:0001871;2.19e-10;6!UBERON:0000200;3.14e-09;6!UBERON:0002021;1.33e-08;5!UBERON:0001872;1.52e-08;5!UBERON:0002420;2.62e-08;9!UBERON:0007245;2.62e-08;9!UBERON:0010009;2.62e-08;9!UBERON:0010011;2.62e-08;9!UBERON:0000454;2.62e-08;9!UBERON:0000922;3.30e-08;49!UBERON:0000369;2.73e-07;4!UBERON:0002435;2.73e-07;4!UBERON:0000204;2.73e-07;4!UBERON:0004732;4.83e-07;13!UBERON:0007023;5.96e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.47e-34,56;UBERON:0005068,1.47e-34,56;UBERON:0006241,1.47e-34,56;UBERON:0007135,1.47e-34,56;UBERON:0001869,2.61e-32,32;UBERON:0000073,1.89e-31,53;UBERON:0002616,1.89e-31,53;UBERON:0001017,5.26e-31,81;UBERON:0001016,9.73e-31,89;UBERON:0001893,6.95e-30,34;UBERON:0001950,7.95e-30,20;UBERON:0002791,1.01e-29,32;UBERON:0002619,1.30e-29,22;UBERON:0003528,2.28e-29,34;UBERON:0002020,2.28e-29,34;UBERON:0000955,1.71e-27,68;UBERON:0006238,1.71e-27,68;UBERON:0002780,6.77e-27,41;UBERON:0001890,6.77e-27,41;UBERON:0003080,6.77e-27,41;UBERON:0006240,6.77e-27,41;UBERON:0003075,4.36e-26,82;UBERON:0007284,4.36e-26,82;UBERON:0002346,1.14e-25,86;UBERON:0000956,2.70e-25,25;UBERON:0000203,2.70e-25,25;UBERON:0007023,1.18e-21,114;UBERON:0010371,1.03e-20,104;UBERON:0003056,6.12e-19,61;UBERON:0011216,2.29e-18,223;UBERON:0004121,5.01e-18,171;UBERON:0000924,5.01e-18,171;UBERON:0006601,5.01e-18,171;UBERON:0010314,9.74e-15,132;UBERON:0001871,1.84e-10,6;UBERON:0000200,2.09e-09,6;UBERON:0003076,9.02e-09,15;UBERON:0003057,9.02e-09,15;UBERON:0001872,9.89e-09,5;UBERON:0002021,1.50e-08,5;UBERON:0002420,2.12e-08,9;UBERON:0007245,2.12e-08,9;UBERON:0010009,2.12e-08,9;UBERON:0010011,2.12e-08,9;UBERON:0000454,2.12e-08,9;UBERON:0000025,1.69e-07,192;UBERON:0000369,2.74e-07,4;UBERON:0002435,2.74e-07,4;UBERON:0000204,2.74e-07,4;UBERON:0010082,2.74e-07,4;UBERON:0004732,4.63e-07,13 | |||
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| ||
|short_description=p9@LDB1 | |||
}} | }} |
Latest revision as of 00:12, 16 September 2015
Short description: | p9@LDB1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LDB1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -131bp_to_ENST00000425280, NM_001113407, uc009xwz.2_5end |
EntrezGene: | LDB1 |
HGNC: | 6532 |
UniProt: | Q86U70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data