FFCP PHASE1:Mm9::chr7:114809099..114809120,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=195 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:114809099..114809120,+ | |||
|description=CAGE_peak_at_chr7:114809099..114809120,+ | |description=CAGE_peak_at_chr7:114809099..114809120,+ | ||
|id=chr7:114809099..114809120,+ | |id=chr7:114809099..114809120,+ | ||
|ontology_enrichment_celltype=CL:0002563!6.80e-11!9;CL:0002251!6.80e-11!9;CL:0000239!3.51e-08!6;CL:0000677!3.51e-08!6;CL:0000212!3.51e-08!6;CL:0000584!3.51e-08!6;CL:0000075!8.30e-07!7 | |ontology_enrichment_celltype=CL:0002563!6.80e-11!9;CL:0002251!6.80e-11!9;CL:0000239!3.51e-08!6;CL:0000677!3.51e-08!6;CL:0000212!3.51e-08!6;CL:0000584!3.51e-08!6;CL:0000075!8.30e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.94e-21,9;CL:0002251,1.94e-21,9;CL:0000239,1.16e-15,6;CL:0000677,1.16e-15,6;CL:0000584,1.16e-15,6;CL:0000075,2.54e-13,7;CL:0002076,3.34e-12,15;CL:0000066,5.05e-12,25;CL:0000223,9.59e-09,20;CL:0000682,7.40e-08,3;CL:0002250,2.21e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.60e-24!43;UBERON:0005409!2.05e-22!59;UBERON:0000344!4.09e-17!15;UBERON:0001242!2.27e-15!13;UBERON:0000060!2.27e-15!13;UBERON:0001262!2.27e-15!13;UBERON:0004786!2.27e-15!13;UBERON:0004923!3.28e-11!24;UBERON:0003350!6.80e-11!9;UBERON:0004808!6.80e-11!9;UBERON:0001277!6.80e-11!9;UBERON:0000485!1.99e-08!11;UBERON:0004119!5.42e-08!130;UBERON:0000925!5.42e-08!130;UBERON:0006595!5.42e-08!130;UBERON:0001007!2.98e-07!128;UBERON:0001555!2.98e-07!128;UBERON:0007026!2.98e-07!128 | |ontology_enrichment_uberon=UBERON:0000160!8.60e-24!43;UBERON:0005409!2.05e-22!59;UBERON:0000344!4.09e-17!15;UBERON:0001242!2.27e-15!13;UBERON:0000060!2.27e-15!13;UBERON:0001262!2.27e-15!13;UBERON:0004786!2.27e-15!13;UBERON:0004923!3.28e-11!24;UBERON:0003350!6.80e-11!9;UBERON:0004808!6.80e-11!9;UBERON:0001277!6.80e-11!9;UBERON:0000485!1.99e-08!11;UBERON:0004119!5.42e-08!130;UBERON:0000925!5.42e-08!130;UBERON:0006595!5.42e-08!130;UBERON:0001007!2.98e-07!128;UBERON:0001555!2.98e-07!128;UBERON:0007026!2.98e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.15e-65,31;UBERON:0005409,3.07e-44,47;UBERON:0001242,5.17e-31,13;UBERON:0001262,5.17e-31,13;UBERON:0004786,5.17e-31,13;UBERON:0000344,1.66e-30,15;UBERON:0003350,1.94e-21,9;UBERON:0004808,1.94e-21,9;UBERON:0001277,1.94e-21,9;UBERON:0004923,6.99e-18,24;UBERON:0000485,3.06e-17,11;UBERON:0001007,2.63e-15,116;UBERON:0001555,2.63e-15,116;UBERON:0007026,2.63e-15,116;UBERON:0004119,6.19e-15,118;UBERON:0000925,6.19e-15,118;UBERON:0006595,6.19e-15,118;UBERON:0004921,1.75e-14,114;UBERON:0002108,9.41e-11,4;UBERON:0000331,2.25e-08,3;UBERON:0002116,2.25e-08,3;UBERON:0001204,2.25e-08,3;UBERON:0001168,2.25e-08,3 | |||
|phase1_expression=0,9.07336059862339,4.09499315450582,19.0552453123303,13.5241847085514,3.02182689441402,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.95995453676044,1.14704640533585,3.44539178469012,2.15380998079537,3.23206849028834,9.5011709728187,5.54466285471848,1.77384408524244,0,0,0,1.73310971850765,1.99481574430191,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.5030937339934,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,1.07783996466421,0,0.527853372491847,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1642894130603,4.49565963328025,0.639864751605702,0.928946687441754,1.03093969057675,2.21851877085677,2.44615848229357,3.80451252225118,7.11793592316767,3.12928013975621,5.52937459360593,6.36660710531683,6.82374304916921,3.59527763461689,12.3198688428576,9.35963984295526,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,6.70405924248657,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.418176592028937,0.218362563746178,0.134864346384821,0.0826534557253359,0,9.85073797017626,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0,0,0.192909220463705,0.824171801606613,0.147198920134397,0.685738504770831,0,0.715308569841963,0.290692833264657,0,0.169229215783353,0.365855945745545,0.526139422875686,0,0,0.237270036248348,0.29551344712669,0.818462086339379,0,0.385813221962283,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,9.07336059862339,4.09499315450582,19.0552453123303,13.5241847085514,3.02182689441402,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.95995453676044,1.14704640533585,3.44539178469012,2.15380998079537,3.23206849028834,9.5011709728187,5.54466285471848,1.77384408524244,0,0,0,1.73310971850765,1.99481574430191,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.5030937339934,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,1.07783996466421,0,0.527853372491847,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1642894130603,4.49565963328025,0.639864751605702,0.928946687441754,1.03093969057675,2.21851877085677,2.44615848229357,3.80451252225118,7.11793592316767,3.12928013975621,5.52937459360593,6.36660710531683,6.82374304916921,3.59527763461689,12.3198688428576,9.35963984295526,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,6.70405924248657,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.418176592028937,0.218362563746178,0.134864346384821,0.0826534557253359,0,9.85073797017626,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0,0,0.192909220463705,0.824171801606613,0.147198920134397,0.685738504770831,0,0.715308569841963,0.290692833264657,0,0.169229215783353,0.365855945745545,0.526139422875686,0,0,0.237270036248348,0.29551344712669,0.818462086339379,0,0.385813221962283,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr7:114809099..114809120,+ | |short_description=p@chr7:114809099..114809120,+ | ||
}} | }} |
Latest revision as of 00:26, 4 August 2015
Short description: | p@chr7:114809099..114809120, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:114809099..114809120, + |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.94e-21 | 9 |
epithelial cell of alimentary canal | 1.94e-21 | 9 |
brush border epithelial cell | 1.16e-15 | 6 |
gut absorptive cell | 1.16e-15 | 6 |
enterocyte | 1.16e-15 | 6 |
columnar/cuboidal epithelial cell | 2.54e-13 | 7 |
endo-epithelial cell | 3.34e-12 | 15 |
epithelial cell | 5.05e-12 | 25 |
endodermal cell | 9.59e-09 | 20 |
M cell of gut | 7.40e-08 | 3 |
intestinal crypt stem cell | 2.21e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.15e-65 | 31 |
gastrointestinal system | 3.07e-44 | 47 |
intestinal mucosa | 5.17e-31 | 13 |
wall of intestine | 5.17e-31 | 13 |
gastrointestinal system mucosa | 5.17e-31 | 13 |
mucosa | 1.66e-30 | 15 |
epithelium of mucosa | 1.94e-21 | 9 |
gastrointestinal system epithelium | 1.94e-21 | 9 |
intestinal epithelium | 1.94e-21 | 9 |
organ component layer | 6.99e-18 | 24 |
simple columnar epithelium | 3.06e-17 | 11 |
digestive system | 2.63e-15 | 116 |
digestive tract | 2.63e-15 | 116 |
primitive gut | 2.63e-15 | 116 |
endoderm-derived structure | 6.19e-15 | 118 |
endoderm | 6.19e-15 | 118 |
presumptive endoderm | 6.19e-15 | 118 |
subdivision of digestive tract | 1.75e-14 | 114 |
small intestine | 9.41e-11 | 4 |
ileal mucosa | 2.25e-08 | 3 |
ileum | 2.25e-08 | 3 |
mucosa of small intestine | 2.25e-08 | 3 |
wall of small intestine | 2.25e-08 | 3 |