FFCP PHASE1:Hg19::chr10:95360446..95360509,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5950 | |EntrezGene=5950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9922 | |HGNC=9922 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000471333_5end | |association_with_transcript=0bp_to_ENST00000471333_5end | ||
|cluster_id=chr10:95360446..95360509,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_RBP4_5end | |description=CAGE_peak_3_at_RBP4_5end | ||
|id=chr10:95360446..95360509,- | |id=chr10:95360446..95360509,- | ||
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|ontology_enrichment_celltype_v019=CL:0000136;4.93e-37;13!CL:0000182;7.84e-23;12!CL:0002521;1.88e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.20e-32,15;CL:0000182,7.00e-23,12;CL:0002521,1.94e-11,3;CL:0000223,1.92e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.98e-17;11!UBERON:0009497;9.93e-15;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@RBP4 | |short_description=p3@RBP4 | ||
}} | }} |
Latest revision as of 01:43, 20 September 2015
Short description: | p3@RBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RBP4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000471333_5end |
EntrezGene: | RBP4 |
HGNC: | 9922 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.20e-32 | 15 |
hepatocyte | 7.00e-23 | 12 |
subcutaneous fat cell | 1.94e-11 | 3 |
endodermal cell | 1.92e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.34e-25 | 19 |
digestive gland | 2.34e-25 | 19 |
liver bud | 2.34e-25 | 19 |
hepatic diverticulum | 9.29e-22 | 22 |
liver primordium | 9.29e-22 | 22 |
digestive tract diverticulum | 9.11e-21 | 23 |
endocrine gland | 1.44e-20 | 35 |
epithelial sac | 5.07e-19 | 25 |
epithelium of foregut-midgut junction | 5.07e-19 | 25 |
anatomical boundary | 5.07e-19 | 25 |
hepatobiliary system | 5.07e-19 | 25 |
foregut-midgut junction | 5.07e-19 | 25 |
septum transversum | 5.07e-19 | 25 |
sac | 3.00e-18 | 26 |
pituitary gland | 5.55e-16 | 2 |
endocrine system | 1.22e-15 | 45 |
exocrine gland | 3.92e-15 | 31 |
exocrine system | 3.92e-15 | 31 |
gland | 5.40e-14 | 59 |
gut epithelium | 8.78e-13 | 54 |
subcutaneous adipose tissue | 1.94e-11 | 3 |
abdominal segment of trunk | 3.73e-09 | 60 |
abdomen | 3.73e-09 | 60 |
gland of diencephalon | 1.91e-08 | 4 |
neuroendocrine gland | 1.91e-08 | 4 |
abdomen element | 3.19e-08 | 54 |
abdominal segment element | 3.19e-08 | 54 |
endo-epithelium | 7.25e-08 | 82 |
hypodermis | 3.36e-07 | 5 |