FFCP PHASE1:Mm9::chr6:58857114..58857125,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=58243 | |EntrezGene=58243 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JJF0 | |UniProt=Q9JJF0 | ||
|association_with_transcript=0bp_to_ENSMUST00000059539,NM_021432,uc009cdg.1_5end | |association_with_transcript=0bp_to_ENSMUST00000059539,NM_021432,uc009cdg.1_5end | ||
|cluster_id=chr6:58857114..58857125,- | |||
|description=CAGE_peak_4_at_Nap1l5_5end | |description=CAGE_peak_4_at_Nap1l5_5end | ||
|id=chr6:58857114..58857125,- | |id=chr6:58857114..58857125,- | ||
|ontology_enrichment_celltype=CL:0000117!5.39e-13!23;CL:0000337!5.39e-13!23;CL:0000540!4.66e-10!33;CL:0000047!4.66e-10!33;CL:0000031!4.66e-10!33;CL:0000404!4.66e-10!33;CL:0000221!2.23e-08!44;CL:0000133!2.23e-08!44;CL:0002319!2.38e-08!43;CL:0000393!5.99e-07!39;CL:0000211!5.99e-07!39 | |ontology_enrichment_celltype=CL:0000117!5.39e-13!23;CL:0000337!5.39e-13!23;CL:0000540!4.66e-10!33;CL:0000047!4.66e-10!33;CL:0000031!4.66e-10!33;CL:0000404!4.66e-10!33;CL:0000221!2.23e-08!44;CL:0000133!2.23e-08!44;CL:0002319!2.38e-08!43;CL:0000393!5.99e-07!39;CL:0000211!5.99e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.67e-19,23;CL:0000337,1.67e-19,23;CL:0000540,4.90e-12,33;CL:0000047,4.90e-12,33;CL:0000031,4.90e-12,33;CL:0000404,4.90e-12,33;CL:0000393,1.96e-09,39;CL:0000211,1.96e-09,39;CL:0002319,4.06e-08,43;CL:0000221,7.91e-08,44;CL:0000133,7.91e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.19e-28!71;UBERON:0003075!2.19e-28!71;UBERON:0007284!2.19e-28!71;UBERON:0001017!2.26e-28!73;UBERON:0005743!2.26e-28!73;UBERON:0001049!6.75e-28!52;UBERON:0005068!6.75e-28!52;UBERON:0006241!6.75e-28!52;UBERON:0007135!6.75e-28!52;UBERON:0000073!1.33e-27!75;UBERON:0001016!1.33e-27!75;UBERON:0000955!2.69e-26!50;UBERON:0006238!2.69e-26!50;UBERON:0000033!1.22e-25!63;UBERON:0004121!1.25e-25!102;UBERON:0000924!1.25e-25!102;UBERON:0006601!1.25e-25!102;UBERON:0002616!1.36e-25!49;UBERON:0003056!3.07e-21!49;UBERON:0003080!1.21e-20!40;UBERON:0002020!6.15e-20!34;UBERON:0002780!8.42e-20!39;UBERON:0001890!8.42e-20!39;UBERON:0006240!8.42e-20!39;UBERON:0002791!1.96e-16!29;UBERON:0003528!1.96e-16!29;UBERON:0001893!1.96e-16!29;UBERON:0007811!1.80e-12!86;UBERON:0000153!1.30e-11!94;UBERON:0000956!5.46e-11!21;UBERON:0001869!5.46e-11!21;UBERON:0000203!5.46e-11!21;UBERON:0002021!4.70e-09!10;UBERON:0000411!4.70e-09!10;UBERON:0001950!4.70e-09!10;UBERON:0002619!7.03e-09!17;UBERON:0003076!1.06e-07!12;UBERON:0003057!1.06e-07!12;UBERON:0002420!8.40e-07!8;UBERON:0007245!8.40e-07!8;UBERON:0010009!8.40e-07!8;UBERON:0010011!8.40e-07!8;UBERON:0000454!8.40e-07!8 | |ontology_enrichment_uberon=UBERON:0002346!2.19e-28!71;UBERON:0003075!2.19e-28!71;UBERON:0007284!2.19e-28!71;UBERON:0001017!2.26e-28!73;UBERON:0005743!2.26e-28!73;UBERON:0001049!6.75e-28!52;UBERON:0005068!6.75e-28!52;UBERON:0006241!6.75e-28!52;UBERON:0007135!6.75e-28!52;UBERON:0000073!1.33e-27!75;UBERON:0001016!1.33e-27!75;UBERON:0000955!2.69e-26!50;UBERON:0006238!2.69e-26!50;UBERON:0000033!1.22e-25!63;UBERON:0004121!1.25e-25!102;UBERON:0000924!1.25e-25!102;UBERON:0006601!1.25e-25!102;UBERON:0002616!1.36e-25!49;UBERON:0003056!3.07e-21!49;UBERON:0003080!1.21e-20!40;UBERON:0002020!6.15e-20!34;UBERON:0002780!8.42e-20!39;UBERON:0001890!8.42e-20!39;UBERON:0006240!8.42e-20!39;UBERON:0002791!1.96e-16!29;UBERON:0003528!1.96e-16!29;UBERON:0001893!1.96e-16!29;UBERON:0007811!1.80e-12!86;UBERON:0000153!1.30e-11!94;UBERON:0000956!5.46e-11!21;UBERON:0001869!5.46e-11!21;UBERON:0000203!5.46e-11!21;UBERON:0002021!4.70e-09!10;UBERON:0000411!4.70e-09!10;UBERON:0001950!4.70e-09!10;UBERON:0002619!7.03e-09!17;UBERON:0003076!1.06e-07!12;UBERON:0003057!1.06e-07!12;UBERON:0002420!8.40e-07!8;UBERON:0007245!8.40e-07!8;UBERON:0010009!8.40e-07!8;UBERON:0010011!8.40e-07!8;UBERON:0000454!8.40e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.17e-43,54;UBERON:0001049,7.57e-41,52;UBERON:0005068,7.57e-41,52;UBERON:0006241,7.57e-41,52;UBERON:0007135,7.57e-41,52;UBERON:0001017,1.25e-36,73;UBERON:0001016,2.50e-35,75;UBERON:0002346,1.25e-34,64;UBERON:0003075,1.25e-34,64;UBERON:0007284,1.25e-34,64;UBERON:0002020,1.99e-34,34;UBERON:0000955,1.12e-33,47;UBERON:0006238,1.12e-33,47;UBERON:0002616,2.19e-32,46;UBERON:0010371,5.91e-29,73;UBERON:0003080,3.25e-28,40;UBERON:0004121,4.58e-28,95;UBERON:0000924,4.58e-28,95;UBERON:0006601,4.58e-28,95;UBERON:0003528,1.74e-27,29;UBERON:0002791,1.74e-27,29;UBERON:0001893,1.74e-27,29;UBERON:0002780,1.12e-26,39;UBERON:0001890,1.12e-26,39;UBERON:0006240,1.12e-26,39;UBERON:0003056,1.01e-24,49;UBERON:0010314,1.22e-20,92;UBERON:0000956,7.73e-17,21;UBERON:0001869,7.73e-17,21;UBERON:0000203,7.73e-17,21;UBERON:0002021,1.17e-16,10;UBERON:0000411,1.17e-16,10;UBERON:0001950,1.17e-16,10;UBERON:0002619,1.52e-14,17;UBERON:0000025,9.92e-13,114;UBERON:0003076,1.30e-12,12;UBERON:0003057,1.30e-12,12;UBERON:0002420,3.90e-12,8;UBERON:0007245,3.90e-12,8;UBERON:0010009,3.90e-12,8;UBERON:0010011,3.90e-12,8;UBERON:0000454,3.90e-12,8;UBERON:0004111,3.27e-11,122;UBERON:0002240,1.63e-09,6;UBERON:0005174,1.63e-09,6;UBERON:0001137,1.63e-09,6;UBERON:0001948,4.31e-08,5;UBERON:0002315,4.31e-08,5;UBERON:0000369,6.12e-08,5;UBERON:0002435,6.12e-08,5;UBERON:0000204,6.12e-08,5;UBERON:0010082,6.12e-08,5;UBERON:0002950,2.17e-07,4;UBERON:0001891,2.17e-07,4;UBERON:0009616,2.17e-07,4;UBERON:0010286,2.17e-07,4 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0,0,1.61853168687678,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0.384218305321555,1.34796496001021,0.945041568321835,1.26194976810829,5.42736870367227,3.97563373712904,1.34739879136449,0.766763768145891,0,5.50579404996943,4.72443150915195,6.29786786350598,1.71452174049252,1.55528994124096,2.6045668527838,6.70039197603314,4.50210088025344,7.63991238884051,6.18720029494702,8.82704420954438,3.16879057903011,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,0.173485326766136,0,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0,0.433798070759735,0,0.161766849947409,0,0,0,20.4946557908083,12.3573557019938,0,0,0,0,9.13722900369418,10.0650132620098,8.04187853522332,7.12679712788333,4.60287823194595,8.93488591606108,7.30085683804909,0.203678727700633,0,0.252722758433675,1.26265113531884,0.130120442962704,0.689706313300419,0.180062129805349,0,0.544291993210623,0.12811372028485,0.187403449119458,1.55222022443409,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,6.09840850835969,4.01327988279209,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0.295220295959204,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,0,0,0.568474235311454,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,6.26147300952389,5.86058432961016,0,0,0.315508219416257,0,0.430846795465598,0.477937595905104,0.222798674082394,0,0,0,0,4.4984984299053,1.84522110770749,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,4.08527526904546,0.36012218806262,0,0.643011105094777,1.41872186913819,0.356737635204141,0.987294123612726,0.913394847343798,0,0,0,0,0,0.120625849856312,0,0.164140899745061,0,6.30446026835733,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.655087691238533,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,9.60078132449013,5.52390283808612,6.30185064783336,5.67115501734169,7.53590771747707,8.3093328712867,10.8003600037089,6.30449684513909,9.9691329976525,8.28416498802912,0.31136204275253,1.19707462020309,0,0.729320151204882,1.25767897576789,0.735374033800057,0.888986911206461,1.03017528619447,0.962757628775446,1.76888048234658,2.28131369901216,1.32038438970253,0.936415074698824,0.576226371643824,1.14870937911227,0.476293691283074,0.579421629724277,0.578727661391115,0.824171801606613,0.883193520806384,1.37147700954166,0.177475806159338,0.715308569841963,0.581385666529314,0.752875043322645,0.338458431566706,0.365855945745545,0.526139422875686,0.814824683075171,0,0.474540072496697,0.886540341380071,0,0.619747364743864,0.964533054905707,0.999242311751784,1.16965804222704,1.07435527024149,0.382576664137687,0,0 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0,0,1.61853168687678,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0.384218305321555,1.34796496001021,0.945041568321835,1.26194976810829,5.42736870367227,3.97563373712904,1.34739879136449,0.766763768145891,0,5.50579404996943,4.72443150915195,6.29786786350598,1.71452174049252,1.55528994124096,2.6045668527838,6.70039197603314,4.50210088025344,7.63991238884051,6.18720029494702,8.82704420954438,3.16879057903011,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,0.173485326766136,0,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0,0.433798070759735,0,0.161766849947409,0,0,0,20.4946557908083,12.3573557019938,0,0,0,0,9.13722900369418,10.0650132620098,8.04187853522332,7.12679712788333,4.60287823194595,8.93488591606108,7.30085683804909,0.203678727700633,0,0.252722758433675,1.26265113531884,0.130120442962704,0.689706313300419,0.180062129805349,0,0.544291993210623,0.12811372028485,0.187403449119458,1.55222022443409,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,6.09840850835969,4.01327988279209,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0.295220295959204,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,0,0,0.568474235311454,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,6.26147300952389,5.86058432961016,0,0,0.315508219416257,0,0.430846795465598,0.477937595905104,0.222798674082394,0,0,0,0,4.4984984299053,1.84522110770749,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,4.08527526904546,0.36012218806262,0,0.643011105094777,1.41872186913819,0.356737635204141,0.987294123612726,0.913394847343798,0,0,0,0,0,0.120625849856312,0,0.164140899745061,0,6.30446026835733,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.655087691238533,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,9.60078132449013,5.52390283808612,6.30185064783336,5.67115501734169,7.53590771747707,8.3093328712867,10.8003600037089,6.30449684513909,9.9691329976525,8.28416498802912,0.31136204275253,1.19707462020309,0,0.729320151204882,1.25767897576789,0.735374033800057,0.888986911206461,1.03017528619447,0.962757628775446,1.76888048234658,2.28131369901216,1.32038438970253,0.936415074698824,0.576226371643824,1.14870937911227,0.476293691283074,0.579421629724277,0.578727661391115,0.824171801606613,0.883193520806384,1.37147700954166,0.177475806159338,0.715308569841963,0.581385666529314,0.752875043322645,0.338458431566706,0.365855945745545,0.526139422875686,0.814824683075171,0,0.474540072496697,0.886540341380071,0,0.619747364743864,0.964533054905707,0.999242311751784,1.16965804222704,1.07435527024149,0.382576664137687,0,0 | ||
|short_description=p4@Nap1l5 | |short_description=p4@Nap1l5 | ||
}} | }} |
Latest revision as of 14:53, 1 October 2015
Short description: | p4@Nap1l5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nap1l5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000059539, NM_021432, uc009cdg.1_5end |
EntrezGene: | Nap1l5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.67e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.67e-19 | 23 |
neuron | 4.90e-12 | 33 |
neuronal stem cell | 4.90e-12 | 33 |
neuroblast | 4.90e-12 | 33 |
electrically signaling cell | 4.90e-12 | 33 |
electrically responsive cell | 1.96e-09 | 39 |
electrically active cell | 1.96e-09 | 39 |
neural cell | 4.06e-08 | 43 |
ectodermal cell | 7.91e-08 | 44 |
neurectodermal cell | 7.91e-08 | 44 |