FFCP PHASE1:Mm9::chr6:129189813..129189824,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=467 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:129189813..129189824,- | |||
|description=CAGE_peak_at_chr6:129189813..129189824,- | |description=CAGE_peak_at_chr6:129189813..129189824,- | ||
|id=chr6:129189813..129189824,- | |id=chr6:129189813..129189824,- | ||
|ontology_enrichment_celltype=CL:0000624!2.27e-32!8;CL:0000791!1.18e-28!9;CL:0000789!1.18e-28!9;CL:0002420!1.18e-28!9;CL:0002419!1.18e-28!9;CL:0000790!1.18e-28!9;CL:0000838!1.89e-26!12;CL:0000893!1.72e-24!6;CL:0002489!1.72e-24!6;CL:0000898!1.72e-24!6;CL:0000809!1.72e-24!6;CL:0000810!1.72e-24!6;CL:0000895!1.72e-24!6;CL:0000808!1.72e-24!6;CL:0000894!1.72e-24!6;CL:0000806!1.72e-24!6;CL:0000807!1.72e-24!6;CL:0000805!1.72e-24!6;CL:0002425!1.72e-24!6;CL:0002436!1.72e-24!6;CL:0002427!1.72e-24!6;CL:0002428!1.72e-24!6;CL:0002429!1.72e-24!6;CL:0002433!1.72e-24!6;CL:0002431!1.72e-24!6;CL:0002432!1.72e-24!6;CL:0000542!2.60e-24!13;CL:0000051!2.60e-24!13;CL:0000084!3.03e-23!11;CL:0000827!3.03e-23!11;CL:0000738!2.90e-18!17;CL:0002087!2.90e-18!17;CL:0002031!5.97e-18!25;CL:0000988!1.33e-13!32;CL:0002032!1.33e-13!32;CL:0000037!1.33e-13!32;CL:0000566!1.33e-13!32;CL:0000837!1.33e-13!32;CL:0002320!7.10e-09!46;CL:0000134!7.10e-09!46;CL:0000219!2.83e-07!54 | |ontology_enrichment_celltype=CL:0000624!2.27e-32!8;CL:0000791!1.18e-28!9;CL:0000789!1.18e-28!9;CL:0002420!1.18e-28!9;CL:0002419!1.18e-28!9;CL:0000790!1.18e-28!9;CL:0000838!1.89e-26!12;CL:0000893!1.72e-24!6;CL:0002489!1.72e-24!6;CL:0000898!1.72e-24!6;CL:0000809!1.72e-24!6;CL:0000810!1.72e-24!6;CL:0000895!1.72e-24!6;CL:0000808!1.72e-24!6;CL:0000894!1.72e-24!6;CL:0000806!1.72e-24!6;CL:0000807!1.72e-24!6;CL:0000805!1.72e-24!6;CL:0002425!1.72e-24!6;CL:0002436!1.72e-24!6;CL:0002427!1.72e-24!6;CL:0002428!1.72e-24!6;CL:0002429!1.72e-24!6;CL:0002433!1.72e-24!6;CL:0002431!1.72e-24!6;CL:0002432!1.72e-24!6;CL:0000542!2.60e-24!13;CL:0000051!2.60e-24!13;CL:0000084!3.03e-23!11;CL:0000827!3.03e-23!11;CL:0000738!2.90e-18!17;CL:0002087!2.90e-18!17;CL:0002031!5.97e-18!25;CL:0000988!1.33e-13!32;CL:0002032!1.33e-13!32;CL:0000037!1.33e-13!32;CL:0000566!1.33e-13!32;CL:0000837!1.33e-13!32;CL:0002320!7.10e-09!46;CL:0000134!7.10e-09!46;CL:0000219!2.83e-07!54 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.38e-56,8;CL:0000791,5.11e-50,9;CL:0000789,5.11e-50,9;CL:0002420,5.11e-50,9;CL:0002419,5.11e-50,9;CL:0000790,5.11e-50,9;CL:0000084,5.06e-41,11;CL:0000827,5.06e-41,11;CL:0000838,1.20e-37,12;CL:0000542,8.68e-35,13;CL:0000051,8.68e-35,13;CL:0000893,9.27e-34,6;CL:0002489,9.27e-34,6;CL:0000898,9.27e-34,6;CL:0000809,9.27e-34,6;CL:0000810,9.27e-34,6;CL:0000895,9.27e-34,6;CL:0000808,9.27e-34,6;CL:0000894,9.27e-34,6;CL:0000806,9.27e-34,6;CL:0000807,9.27e-34,6;CL:0000805,9.27e-34,6;CL:0002425,9.27e-34,6;CL:0002436,9.27e-34,6;CL:0002427,9.27e-34,6;CL:0002428,9.27e-34,6;CL:0002429,9.27e-34,6;CL:0002433,9.27e-34,6;CL:0002431,9.27e-34,6;CL:0002432,9.27e-34,6;CL:0000738,1.04e-26,17;CL:0002087,1.04e-26,17;CL:0002031,2.79e-18,25;CL:0000988,2.40e-14,32;CL:0002032,2.40e-14,32;CL:0000037,2.40e-14,32;CL:0000837,2.40e-14,32;CL:0000815,3.62e-14,1;CL:0000792,3.62e-14,1;CL:0002320,4.79e-10,46;CL:0000134,4.79e-10,46;CL:0000219,1.40e-08,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.46e-24!29;UBERON:0002370!1.73e-22!23;UBERON:0000974!1.73e-22!23;UBERON:0004807!1.73e-22!23;UBERON:0005058!1.73e-22!23;UBERON:0003351!1.73e-22!23;UBERON:0009113!1.73e-22!23;UBERON:0003295!1.73e-22!23;UBERON:0009722!1.73e-22!23;UBERON:0005562!1.73e-22!23;UBERON:0007690!1.73e-22!23;UBERON:0006562!1.82e-21!24;UBERON:0003408!1.82e-21!24;UBERON:0001557!1.82e-21!24;UBERON:0001042!1.82e-21!24;UBERON:0008814!1.82e-21!24;UBERON:0009145!1.82e-21!24;UBERON:0002193!1.43e-20!48;UBERON:0002390!2.43e-19!45;UBERON:0003061!2.43e-19!45;UBERON:0000072!7.51e-19!27;UBERON:0002405!5.18e-15!70;UBERON:0005057!1.72e-14!51;UBERON:0000063!4.60e-14!35;UBERON:0000065!8.09e-14!41;UBERON:0001004!1.96e-13!42;UBERON:0003081!7.81e-10!88;UBERON:0003929!9.05e-10!55;UBERON:0002384!7.10e-09!46;UBERON:0002368!9.23e-09!60;UBERON:0005911!1.29e-08!69;UBERON:0001041!6.14e-08!92;UBERON:0002530!6.58e-08!65;UBERON:0000490!9.40e-08!66;UBERON:0000077!2.23e-07!97;UBERON:0000949!6.49e-07!72 | |ontology_enrichment_uberon=UBERON:0004177!9.46e-24!29;UBERON:0002370!1.73e-22!23;UBERON:0000974!1.73e-22!23;UBERON:0004807!1.73e-22!23;UBERON:0005058!1.73e-22!23;UBERON:0003351!1.73e-22!23;UBERON:0009113!1.73e-22!23;UBERON:0003295!1.73e-22!23;UBERON:0009722!1.73e-22!23;UBERON:0005562!1.73e-22!23;UBERON:0007690!1.73e-22!23;UBERON:0006562!1.82e-21!24;UBERON:0003408!1.82e-21!24;UBERON:0001557!1.82e-21!24;UBERON:0001042!1.82e-21!24;UBERON:0008814!1.82e-21!24;UBERON:0009145!1.82e-21!24;UBERON:0002193!1.43e-20!48;UBERON:0002390!2.43e-19!45;UBERON:0003061!2.43e-19!45;UBERON:0000072!7.51e-19!27;UBERON:0002405!5.18e-15!70;UBERON:0005057!1.72e-14!51;UBERON:0000063!4.60e-14!35;UBERON:0000065!8.09e-14!41;UBERON:0001004!1.96e-13!42;UBERON:0003081!7.81e-10!88;UBERON:0003929!9.05e-10!55;UBERON:0002384!7.10e-09!46;UBERON:0002368!9.23e-09!60;UBERON:0005911!1.29e-08!69;UBERON:0001041!6.14e-08!92;UBERON:0002530!6.58e-08!65;UBERON:0000490!9.40e-08!66;UBERON:0000077!2.23e-07!97;UBERON:0000949!6.49e-07!72 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.06e-13,1;UBERON:0001097,2.06e-13,1;UBERON:0003968,2.06e-13,1;UBERON:0001467,2.06e-13,1;UBERON:0002384,4.79e-10,46;UBERON:0002370,3.24e-09,23;UBERON:0000974,3.24e-09,23;UBERON:0004807,3.24e-09,23;UBERON:0005058,3.24e-09,23;UBERON:0003351,3.24e-09,23;UBERON:0009113,3.24e-09,23;UBERON:0003295,3.24e-09,23;UBERON:0009722,3.24e-09,23;UBERON:0005562,3.24e-09,23;UBERON:0007690,3.24e-09,23;UBERON:0006562,7.53e-09,24;UBERON:0003408,7.53e-09,24;UBERON:0001557,7.53e-09,24;UBERON:0001042,7.53e-09,24;UBERON:0008814,7.53e-09,24;UBERON:0009145,7.53e-09,24;UBERON:0000072,6.52e-08,27;UBERON:0004177,2.15e-07,29;UBERON:0005057,2.15e-07,29;UBERON:0002193,8.70e-07,48;UBERON:0002405,8.70e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,7.87652272993615,5.34997144176334,3.27690336850791,4.28044920563762,4.22792442675283,0.342401459862411,0.262261207256992,0,0,0,0,0.274228867211478,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0.147689527174577,0,0.0762068066549998,0.201652370273681,0,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,7.87652272993615,5.34997144176334,3.27690336850791,4.28044920563762,4.22792442675283,0.342401459862411,0.262261207256992,0,0,0,0,0.274228867211478,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0.147689527174577,0,0.0762068066549998,0.201652370273681,0,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:129189813..129189824,- | |short_description=p@chr6:129189813..129189824,- | ||
}} | }} |
Latest revision as of 06:17, 5 August 2015
Short description: | p@chr6:129189813..129189824, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:129189813..129189824, - |
Coexpression cluster: | MCL_coexpression_mm9:467 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 2.06e-13 | 1 |
axillary lymph node | 2.06e-13 | 1 |
peripheral lymph node | 2.06e-13 | 1 |
shoulder | 2.06e-13 | 1 |
connective tissue | 4.79e-10 | 46 |
thymus | 3.24e-09 | 23 |
neck | 3.24e-09 | 23 |
respiratory system epithelium | 3.24e-09 | 23 |
hemolymphoid system gland | 3.24e-09 | 23 |
pharyngeal epithelium | 3.24e-09 | 23 |
thymic region | 3.24e-09 | 23 |
pharyngeal gland | 3.24e-09 | 23 |
entire pharyngeal arch endoderm | 3.24e-09 | 23 |
thymus primordium | 3.24e-09 | 23 |
early pharyngeal endoderm | 3.24e-09 | 23 |
pharynx | 7.53e-09 | 24 |
gland of gut | 7.53e-09 | 24 |
upper respiratory tract | 7.53e-09 | 24 |
chordate pharynx | 7.53e-09 | 24 |
pharyngeal arch system | 7.53e-09 | 24 |
pharyngeal region of foregut | 7.53e-09 | 24 |
segment of respiratory tract | 6.52e-08 | 27 |
hemopoietic organ | 2.15e-07 | 29 |
immune organ | 2.15e-07 | 29 |
hemolymphoid system | 8.70e-07 | 48 |
immune system | 8.70e-07 | 48 |