FFCP PHASE1:Hg19::chr10:35641653..35641670,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:35641653..35641670,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr10:35641653..35641670,+ | |description=CAGE_peak_at_chr10:35641653..35641670,+ | ||
|id=chr10:35641653..35641670,+ | |id=chr10:35641653..35641670,+ | ||
|ontology_enrichment_celltype=CL:0000623!2.12e-12!3;CL:0000825!2.12e-12!3;CL:0000181!2.56e-07!12;CL:0000417!2.56e-07!12;CL:0000668!2.56e-07!12;CL:0000414!2.56e-07!12;CL:0000412!2.56e-07!12;CL:0000182!2.56e-07!12 | |ontology_enrichment_celltype=CL:0000623!2.12e-12!3;CL:0000825!2.12e-12!3;CL:0000181!2.56e-07!12;CL:0000417!2.56e-07!12;CL:0000668!2.56e-07!12;CL:0000414!2.56e-07!12;CL:0000412!2.56e-07!12;CL:0000182!2.56e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.94e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.94e-14,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!3.71e-10!1;DOID:0050177!3.71e-10!1;DOID:0050427!3.71e-10!1;DOID:178!4.44e-10!1;DOID:326!4.44e-10!1;DOID:3978!4.44e-10!1;DOID:3394!4.44e-10!1;DOID:5844!4.44e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000029!3.10e-10!1;UBERON:0005057!1.81e-08!26;UBERON:0002107!8.10e-08!19;UBERON:0006925!8.10e-08!19;UBERON:0008836!8.10e-08!19;UBERON:0008835!9.17e-07!22;UBERON:0003894!9.17e-07!22 | |ontology_enrichment_uberon=UBERON:0000029!3.10e-10!1;UBERON:0005057!1.81e-08!26;UBERON:0002107!8.10e-08!19;UBERON:0006925!8.10e-08!19;UBERON:0008836!8.10e-08!19;UBERON:0008835!9.17e-07!22;UBERON:0003894!9.17e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.31e-19;19!UBERON:0006925;1.31e-19;19!UBERON:0002423;3.99e-15;25!UBERON:0002365;9.49e-13;31!UBERON:0002330;9.49e-13;31!UBERON:0001007;6.96e-10;81!UBERON:0002368;8.82e-10;33!UBERON:0000160;8.86e-10;17!UBERON:0002108;3.35e-09;4!UBERON:0000949;1.70e-08;43!UBERON:0005409;7.23e-08;22!UBERON:0005172;6.34e-07;52!UBERON:0005173;6.34e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.31e-19,19;UBERON:0006925,1.31e-19,19;UBERON:0008836,1.31e-19,19;UBERON:0008835,4.60e-17,22;UBERON:0003894,4.60e-17,22;UBERON:0009854,2.31e-16,23;UBERON:0007499,3.99e-15,25;UBERON:0009497,3.99e-15,25;UBERON:0000015,3.99e-15,25;UBERON:0002423,3.99e-15,25;UBERON:0006235,3.99e-15,25;UBERON:0004161,3.99e-15,25;UBERON:0009856,1.41e-14,26;UBERON:0002365,2.30e-12,31;UBERON:0002330,2.30e-12,31;UBERON:0002368,4.78e-11,35;UBERON:0000160,8.86e-10,17;UBERON:0002108,3.49e-09,4;UBERON:0004921,6.01e-09,118;UBERON:0000949,9.12e-09,45;UBERON:0003929,1.99e-07,54;UBERON:0005172,1.99e-07,54;UBERON:0005173,1.99e-07,54;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0005409,4.55e-07,25;UBERON:0002530,7.38e-07,59;UBERON:0002417,9.34e-07,60;UBERON:0000916,9.34e-07,60;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p@chr10:35641653..35641670,+ | |short_description=p@chr10:35641653..35641670,+ | ||
}} | }} |
Latest revision as of 13:27, 23 July 2015
Short description: | p@chr10:35641653..35641670, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:35641653..35641670, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.94e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.31e-19 | 19 |
digestive gland | 1.31e-19 | 19 |
liver bud | 1.31e-19 | 19 |
hepatic diverticulum | 4.60e-17 | 22 |
liver primordium | 4.60e-17 | 22 |
digestive tract diverticulum | 2.31e-16 | 23 |
epithelial sac | 3.99e-15 | 25 |
epithelium of foregut-midgut junction | 3.99e-15 | 25 |
anatomical boundary | 3.99e-15 | 25 |
hepatobiliary system | 3.99e-15 | 25 |
foregut-midgut junction | 3.99e-15 | 25 |
septum transversum | 3.99e-15 | 25 |
sac | 1.41e-14 | 26 |
exocrine gland | 2.30e-12 | 31 |
exocrine system | 2.30e-12 | 31 |
endocrine gland | 4.78e-11 | 35 |
intestine | 8.86e-10 | 17 |
small intestine | 3.49e-09 | 4 |
subdivision of digestive tract | 6.01e-09 | 118 |
endocrine system | 9.12e-09 | 45 |
gut epithelium | 1.99e-07 | 54 |
abdomen element | 1.99e-07 | 54 |
abdominal segment element | 1.99e-07 | 54 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
gastrointestinal system | 4.55e-07 | 25 |
gland | 7.38e-07 | 59 |
abdominal segment of trunk | 9.34e-07 | 60 |
abdomen | 9.34e-07 | 60 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |