FFCP PHASE1:Hg19::chr14:103561012..103561038,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENST00000559843_5end | |association_with_transcript=-21bp_to_ENST00000559843_5end | ||
|cluster_id=chr14:103561012..103561038,+ | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_2_at_ENST00000559843_5end | |description=CAGE_peak_2_at_ENST00000559843_5end | ||
|id=chr14:103561012..103561038,+ | |id=chr14:103561012..103561038,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.93e-07!12;CL:0000417!1.93e-07!12;CL:0000668!1.93e-07!12;CL:0000414!1.93e-07!12;CL:0000412!1.93e-07!12;CL:0000182!1.93e-07!12 | |ontology_enrichment_celltype=CL:0000181!1.93e-07!12;CL:0000417!1.93e-07!12;CL:0000668!1.93e-07!12;CL:0000414!1.93e-07!12;CL:0000412!1.93e-07!12;CL:0000182!1.93e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000228;4.60e-07;1!CL:0002372;4.60e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,3.85e-07,1;CL:0002372,3.85e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.63e-07;1!UBERON:0001045;2.22e-07;1!UBERON:0008801;4.60e-07;1!UBERON:0004874;4.60e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!1.03e-18!129;UBERON:0004185!1.03e-18!129;UBERON:0001007!4.63e-17!155;UBERON:0001555!4.63e-17!155;UBERON:0007026!4.63e-17!155;UBERON:0007023!8.79e-17!115;UBERON:0004119!2.01e-15!169;UBERON:0000925!2.01e-15!169;UBERON:0006595!2.01e-15!169;UBERON:0005409!5.22e-14!35;UBERON:0000077!2.11e-11!130;UBERON:0003929!3.02e-11!54;UBERON:0005057!4.11e-10!26;UBERON:0009854!5.67e-10!23;UBERON:0000160!1.07e-09!27;UBERON:0003101!1.74e-09!22;UBERON:0000079!1.74e-09!22;UBERON:0009497!5.89e-09!25;UBERON:0000015!5.89e-09!25;UBERON:0002423!5.89e-09!25;UBERON:0006235!5.89e-09!25;UBERON:0004161!5.89e-09!25;UBERON:0008835!1.12e-08!22;UBERON:0003894!1.12e-08!22;UBERON:0002530!1.27e-08!59;UBERON:0009856!1.77e-08!26;UBERON:0000059!1.96e-08!11;UBERON:0005172!2.68e-08!55;UBERON:0005173!2.68e-08!55;UBERON:0000481!3.39e-08!347;UBERON:0002417!6.86e-08!61;UBERON:0000916!6.86e-08!61;UBERON:0001041!9.82e-08!98;UBERON:0005911!1.01e-07!82;UBERON:0003135!1.15e-07!11;UBERON:0007499!2.50e-07!25;UBERON:0002107!5.58e-07!19;UBERON:0006925!5.58e-07!19;UBERON:0008836!5.58e-07!19;UBERON:0000062!6.17e-07!511;UBERON:0006947!7.68e-07!3;UBERON:0004054!7.68e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;9.29e-26;17!UBERON:0005409;1.65e-24;22!UBERON:0004921;5.32e-18;33!UBERON:0000059;1.07e-13;11!UBERON:0002108;1.25e-11;4!UBERON:0001155;3.36e-11;9!UBERON:0001007;2.79e-08;81!UBERON:0001555;1.68e-07;54!UBERON:0001154;2.22e-07;1!UBERON:0001153;2.22e-07;1!UBERON:0009854;2.22e-07;1!UBERON:0001000;4.60e-07;1!UBERON:0001831;4.60e-07;1!UBERON:0000989;4.60e-07;1!UBERON:0008811;4.60e-07;1!UBERON:0005352;4.60e-07;1!UBERON:0001567;4.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.56e-26,25;UBERON:0000160,5.73e-26,17;UBERON:0000059,8.55e-14,11;UBERON:0002108,1.21e-11,4;UBERON:0001155,3.33e-11,9;UBERON:0004921,1.73e-09,118;UBERON:0001007,2.92e-08,145;UBERON:0001555,2.92e-08,145;UBERON:0007026,2.92e-08,145;UBERON:0001154,2.37e-07,1;UBERON:0001153,2.37e-07,1;UBERON:0001045,2.37e-07,1;UBERON:0000989,3.41e-07,1;UBERON:0008811,3.41e-07,1;UBERON:0006258,3.41e-07,1;UBERON:0005876,3.41e-07,1;UBERON:0004874,3.41e-07,1;UBERON:0004119,3.57e-07,160;UBERON:0000925,3.57e-07,160;UBERON:0006595,3.57e-07,160;UBERON:0001000,5.19e-07,1;UBERON:0005352,5.19e-07,1;UBERON:0001831,6.57e-07,1;UBERON:0001567,6.57e-07,1;UBERON:0008801,6.57e-07,1 | |||
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| ||
|short_description=p2@ENST00000559843 | |short_description=p2@ENST00000559843 | ||
}} | }} |
Latest revision as of 18:15, 24 July 2015
Short description: | p2@ENST00000559843 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000559843_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | -21bp_to_ENST00000559843_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 3.85e-07 | 1 |
myotube | 3.85e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.56e-26 | 25 |
intestine | 5.73e-26 | 17 |
large intestine | 8.55e-14 | 11 |
small intestine | 1.21e-11 | 4 |
colon | 3.33e-11 | 9 |
subdivision of digestive tract | 1.73e-09 | 118 |
digestive system | 2.92e-08 | 145 |
digestive tract | 2.92e-08 | 145 |
primitive gut | 2.92e-08 | 145 |
vermiform appendix | 2.37e-07 | 1 |
caecum | 2.37e-07 | 1 |
midgut | 2.37e-07 | 1 |
penis | 3.41e-07 | 1 |
intromittent organ | 3.41e-07 | 1 |
lateral plate mesenchyme | 3.41e-07 | 1 |
undifferentiated genital tubercle | 3.41e-07 | 1 |
somatopleure | 3.41e-07 | 1 |
endoderm-derived structure | 3.57e-07 | 160 |
endoderm | 3.57e-07 | 160 |
presumptive endoderm | 3.57e-07 | 160 |
vas deferens | 5.19e-07 | 1 |
spermatic cord | 5.19e-07 | 1 |
parotid gland | 6.57e-07 | 1 |
cheek | 6.57e-07 | 1 |
parotid gland primordium | 6.57e-07 | 1 |