FFCP PHASE1:Mm9::chr5:104183173..104183207,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17355 | |EntrezGene=17355 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A3KMF4,Q3UP77,Q3UQD9 | |UniProt=A3KMF4,Q3UP77,Q3UQD9 | ||
|association_with_transcript=0bp_to_ENSMUST00000054979,NM_133919,uc008yjt.1_5end | |association_with_transcript=0bp_to_ENSMUST00000054979,NM_133919,uc008yjt.1_5end | ||
|cluster_id=chr5:104183173..104183207,+ | |||
|description=CAGE_peak_1_at_Aff1_5end | |description=CAGE_peak_1_at_Aff1_5end | ||
|id=chr5:104183173..104183207,+ | |id=chr5:104183173..104183207,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.51e-11!51;UBERON:0005911!2.38e-11!69;UBERON:0004921!1.19e-10!126;UBERON:0004185!1.19e-10!126;UBERON:0003929!1.71e-10!55;UBERON:0001007!1.89e-10!128;UBERON:0001555!1.89e-10!128;UBERON:0007026!1.89e-10!128;UBERON:0002405!2.08e-10!70;UBERON:0004119!7.65e-10!130;UBERON:0000925!7.65e-10!130;UBERON:0006595!7.65e-10!130;UBERON:0003104!2.61e-09!131;UBERON:0009142!2.61e-09!131;UBERON:0000490!1.39e-08!66;UBERON:0001041!3.30e-08!92;UBERON:0000077!9.04e-08!97;UBERON:0004177!2.09e-07!29;UBERON:0000926!4.61e-07!193;UBERON:0004120!4.61e-07!193;UBERON:0006603!4.61e-07!193;UBERON:0001048!7.29e-07!147 | |ontology_enrichment_uberon=UBERON:0005057!1.51e-11!51;UBERON:0005911!2.38e-11!69;UBERON:0004921!1.19e-10!126;UBERON:0004185!1.19e-10!126;UBERON:0003929!1.71e-10!55;UBERON:0001007!1.89e-10!128;UBERON:0001555!1.89e-10!128;UBERON:0007026!1.89e-10!128;UBERON:0002405!2.08e-10!70;UBERON:0004119!7.65e-10!130;UBERON:0000925!7.65e-10!130;UBERON:0006595!7.65e-10!130;UBERON:0003104!2.61e-09!131;UBERON:0009142!2.61e-09!131;UBERON:0000490!1.39e-08!66;UBERON:0001041!3.30e-08!92;UBERON:0000077!9.04e-08!97;UBERON:0004177!2.09e-07!29;UBERON:0000926!4.61e-07!193;UBERON:0004120!4.61e-07!193;UBERON:0006603!4.61e-07!193;UBERON:0001048!7.29e-07!147 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.76e-11,114;UBERON:0005911,2.38e-11,69;UBERON:0001007,3.02e-11,116;UBERON:0001555,3.02e-11,116;UBERON:0007026,3.02e-11,116;UBERON:0004119,1.41e-10,118;UBERON:0000925,1.41e-10,118;UBERON:0006595,1.41e-10,118;UBERON:0003929,1.71e-10,55;UBERON:0001041,3.23e-09,80;UBERON:0000490,1.39e-08,66;UBERON:0004177,2.09e-07,29;UBERON:0005057,2.09e-07,29;UBERON:0001048,6.46e-07,134;UBERON:0000077,7.30e-07,35 | |||
|phase1_expression=6.88640042550614,32.1057375028212,23.2049612088663,49.906594865627,38.5689712058687,15.1091344720701,11.2134067485852,16.140415430197,20.1327872676883,28.5558722112832,4.79410311031414,3.35043067780413,23.4545000005752,16.6972968620285,39.3069518942482,40.697528745355,46.1710839564577,29.9689057090326,28.2455733227822,26.3121584114779,10.8004978491859,4.26951090163807,3.13439746966722,10.8794847499517,8.94696196161963,23.5435105287158,11.630573896295,14.0056301245828,12.3515222646643,13.8616571367962,6.87364583031445,12.065582795733,9.84103660135312,0,8.95440021228951,5.65197794218874,9.18762103180661,51.8979222113766,21.8773896466664,42.9289470058515,58.8231488031014,56.692775251551,50.49307671524,6.04304726282771,7.60326984146359,5.50640256485045,14.8654355426127,4.14247797122848,6.59058548203415,8.36048566019419,9.23910382727393,10.062679505548,43.7912601810692,34.8173828165445,46.7170380808025,5.91696702882678,10.8882707176728,4.64104883049698,2.22548106945558,2.64495489636016,3.80298842103708,5.08266798103698,6.22506357277798,7.64914759689189,7.9109309005358,7.104801149461,6.2916023208865,3.84218305321555,1.34796496001021,2.29510095163874,1.47227472945967,3.14216082844184,4.41737081903227,2.08234358665422,2.20444583341944,4.5960939330501,2.20231761998777,3.95830748064082,4.14737639791857,2.1101806036831,1.46380229763855,1.56274011167028,4.18774498502071,2.8138130501584,4.12555268997387,2.06240009831567,3.98640706237488,2.23679334990361,20.9004293599588,18.8928900266964,57.9728977403356,18.9293252935905,21.0791113449403,10.2543606411185,16.2444104361917,20.1612099193801,11.7973312910672,4.77204903218562,3.37721805983729,6.71345191569646,7.18301440861071,14.115912515575,56.0571527354621,35.5533351576666,6.061749148314,5.57391704045217,4.04419556011827,14.7297204837587,55.6716449841419,18.1099409659086,4.68410382268567,8.8294988710521,6.91846491768175,8.89263579260473,14.4634109776917,8.41966161908826,8.40462890296871,26.0278842455841,32.7305904221453,13.7501822455298,20.5382612168166,24.2437626567611,27.9587641827183,12.0040126774734,6.91174132484402,23.5020490791904,14.4976300652164,8.39863823390771,10.2926883929182,4.19413790333504,5.49000723382352,1.88481528169297,3.47648640384553,4.34716277461562,5.194701113989,5.353961681236,9.87841829348068,23.2641035040874,18.1960386072246,34.7229062212682,11.0602376518298,7.35686734187113,12.7844112161798,15.0704817835715,24.2209936978727,23.9572656932669,24.549851834649,46.5666067330228,7.54487975264948,5.29497024469894,5.10258260075452,5.2606975782618,6.67313398141435,9.05455632957633,10.906453229621,5.7719937377363,7.72434506044558,6.43369767786788,6.25159698670304,8.28503090142008,9.14651633926275,7.20248245844059,6.62885259638589,11.215561209602,10.6444307892291,14.4171045745253,12.8771232671817,20.5507002566218,17.9370236405694,19.5359282254123,24.8881245305777,18.2749984281665,17.564009223284,17.312628020088,5.67782861123144,4.01327988279209,33.7027158643474,27.2384083663451,4.90562976231038,4.64473343720877,6.70110798874885,10.4875432804138,8.2279876222602,9.70150693174052,18.506633400236,13.5053142873689,17.8447998248191,16.5133871794155,15.9870551437679,16.178749355776,17.7233200897249,18.3209971394018,6.2590407314517,7.65465034485183,13.5249282807697,17.3103628668517,14.1585315632367,21.1108817869859,21.4371860851232,24.3556744166344,23.5498091762062,15.7948369819905,8.59712618552732,21.35617353166,20.8352534819995,21.586762788946,23.9374943238433,27.0118418922707,20.3700681425136,23.5910832709665,20.9154442539796,14.8263163121564,41.6927798929328,10.0478055870496,17.1620720213008,19.4485736019276,14.5311904952749,12.5435315554475,27.7129785249907,3.03186258832776,7.49638891633319,7.63852885988347,7.04070744865506,14.4055381399962,16.901098502907,23.2209040950781,18.4433118604243,20.3747514476873,20.7291199254733,22.6131374307718,20.5495128420416,23.5777965487864,10.5553898757491,8.15858525728064,7.37646409528554,11.5893433447988,5.61927064957272,7.3843362553088,9.01642199571715,12.876017287423,6.62567260774139,5.85658116444958,10.7711698866399,7.16906393857656,13.1451217708613,11.3230612315533,8.50102473517278,6.72188473196017,10.2774822266096,3.85585579706168,21.5748929516568,5.87616492101942,8.79589580509311,18.6416238958965,14.6019652173959,6.79785781233948,7.25576536715402,7.35559811048003,11.5167738223501,10.4527950300935,15.5056975900933,12.7236805317127,9.9819265947722,9.48110273807448,10.5418608574999,15.470331487228,15.6602218646742,4.50152735078276,5.6917820864412,5.14408884075822,7.09360934569094,8.02659679209317,9.70839221552514,8.22055362609418,7.50949465803873,4.66030555900404,16.0985730580122,30.1741842882908,15.5005849628069,11.1578911117088,10.0272768962635,11.1615811826642,17.488850197791,9.08583979851498,30.9276294244113,9.90656966223468,16.6675074632741,32.5877430618115,38.4110779896081,33.1728351149458,27.8764625189923,23.0919896334036,25.8433951014272,8.59203556213602,5.53587988766987,7.1161813494397,5.61627772273367,6.89991376847747,7.86105229486239,10.1148259788616,13.6378201946804,18.061159996898,17.498021394392,25.474911836564,2.81846469342095,7.92437694033088,5.12921320417003,10.3059129822345,5.94135187997563,7.26511339610346,13.848154160199,9.50492009360836,7.23529476537405,2.89900944991207,3.16833006883652,38.5533567166377,7.29810775044591,7.70332178736204,13.6416864126685,19.5139098277555,25.4312134120019,25.3612398487134,26.1410463099002,29.1793040350147,36.7316808077099,30.1470293559153,37.0339946811059,29.6332472252215,49.2051758184405,14.964205318604,3.7737612073591,3.58855426437903,2.01461539636894,16.6143050867684,17.6421526924111,11.1722490803032,9.86094543763703,19.0597399533438,1.6942555278512,3.22227665555024,2.86447756719698,2.40594455281163,3.42541259885321,0.755393897389701,2.02506750069542,4.5032120322422,3.62513927187364,3.62432218226274,5.29315472679301,7.98049746802062,3.92687293234509,7.77941494618541,6.91723436672342,9.92754945630076,14.6682840349066,12.9802086060503,11.2321723357135,11.6240717411347,15.2087579934144,14.5242282867279,11.2369808963859,13.2532065478079,12.0614484806788,14.2888107384922,11.7043169204304,11.1887347868949,13.1867488257058,13.5423006523646,12.6861623382604,12.4233064311536,14.0677352068919,12.9358310802772,13.7399695406383,12.1845035364014,10.0610385080025,16.5733918205841,12.9013908153569,15.1508413347589,12.8125819574108,14.0861409797056,14.3230865109391,11.1554525653896,15.4325288784913,6.24526444844865,8.88940112092552,12.8922632428979,21.998158187917,18.0884963678003,18.0856911783929 | |phase1_expression=6.88640042550614,32.1057375028212,23.2049612088663,49.906594865627,38.5689712058687,15.1091344720701,11.2134067485852,16.140415430197,20.1327872676883,28.5558722112832,4.79410311031414,3.35043067780413,23.4545000005752,16.6972968620285,39.3069518942482,40.697528745355,46.1710839564577,29.9689057090326,28.2455733227822,26.3121584114779,10.8004978491859,4.26951090163807,3.13439746966722,10.8794847499517,8.94696196161963,23.5435105287158,11.630573896295,14.0056301245828,12.3515222646643,13.8616571367962,6.87364583031445,12.065582795733,9.84103660135312,0,8.95440021228951,5.65197794218874,9.18762103180661,51.8979222113766,21.8773896466664,42.9289470058515,58.8231488031014,56.692775251551,50.49307671524,6.04304726282771,7.60326984146359,5.50640256485045,14.8654355426127,4.14247797122848,6.59058548203415,8.36048566019419,9.23910382727393,10.062679505548,43.7912601810692,34.8173828165445,46.7170380808025,5.91696702882678,10.8882707176728,4.64104883049698,2.22548106945558,2.64495489636016,3.80298842103708,5.08266798103698,6.22506357277798,7.64914759689189,7.9109309005358,7.104801149461,6.2916023208865,3.84218305321555,1.34796496001021,2.29510095163874,1.47227472945967,3.14216082844184,4.41737081903227,2.08234358665422,2.20444583341944,4.5960939330501,2.20231761998777,3.95830748064082,4.14737639791857,2.1101806036831,1.46380229763855,1.56274011167028,4.18774498502071,2.8138130501584,4.12555268997387,2.06240009831567,3.98640706237488,2.23679334990361,20.9004293599588,18.8928900266964,57.9728977403356,18.9293252935905,21.0791113449403,10.2543606411185,16.2444104361917,20.1612099193801,11.7973312910672,4.77204903218562,3.37721805983729,6.71345191569646,7.18301440861071,14.115912515575,56.0571527354621,35.5533351576666,6.061749148314,5.57391704045217,4.04419556011827,14.7297204837587,55.6716449841419,18.1099409659086,4.68410382268567,8.8294988710521,6.91846491768175,8.89263579260473,14.4634109776917,8.41966161908826,8.40462890296871,26.0278842455841,32.7305904221453,13.7501822455298,20.5382612168166,24.2437626567611,27.9587641827183,12.0040126774734,6.91174132484402,23.5020490791904,14.4976300652164,8.39863823390771,10.2926883929182,4.19413790333504,5.49000723382352,1.88481528169297,3.47648640384553,4.34716277461562,5.194701113989,5.353961681236,9.87841829348068,23.2641035040874,18.1960386072246,34.7229062212682,11.0602376518298,7.35686734187113,12.7844112161798,15.0704817835715,24.2209936978727,23.9572656932669,24.549851834649,46.5666067330228,7.54487975264948,5.29497024469894,5.10258260075452,5.2606975782618,6.67313398141435,9.05455632957633,10.906453229621,5.7719937377363,7.72434506044558,6.43369767786788,6.25159698670304,8.28503090142008,9.14651633926275,7.20248245844059,6.62885259638589,11.215561209602,10.6444307892291,14.4171045745253,12.8771232671817,20.5507002566218,17.9370236405694,19.5359282254123,24.8881245305777,18.2749984281665,17.564009223284,17.312628020088,5.67782861123144,4.01327988279209,33.7027158643474,27.2384083663451,4.90562976231038,4.64473343720877,6.70110798874885,10.4875432804138,8.2279876222602,9.70150693174052,18.506633400236,13.5053142873689,17.8447998248191,16.5133871794155,15.9870551437679,16.178749355776,17.7233200897249,18.3209971394018,6.2590407314517,7.65465034485183,13.5249282807697,17.3103628668517,14.1585315632367,21.1108817869859,21.4371860851232,24.3556744166344,23.5498091762062,15.7948369819905,8.59712618552732,21.35617353166,20.8352534819995,21.586762788946,23.9374943238433,27.0118418922707,20.3700681425136,23.5910832709665,20.9154442539796,14.8263163121564,41.6927798929328,10.0478055870496,17.1620720213008,19.4485736019276,14.5311904952749,12.5435315554475,27.7129785249907,3.03186258832776,7.49638891633319,7.63852885988347,7.04070744865506,14.4055381399962,16.901098502907,23.2209040950781,18.4433118604243,20.3747514476873,20.7291199254733,22.6131374307718,20.5495128420416,23.5777965487864,10.5553898757491,8.15858525728064,7.37646409528554,11.5893433447988,5.61927064957272,7.3843362553088,9.01642199571715,12.876017287423,6.62567260774139,5.85658116444958,10.7711698866399,7.16906393857656,13.1451217708613,11.3230612315533,8.50102473517278,6.72188473196017,10.2774822266096,3.85585579706168,21.5748929516568,5.87616492101942,8.79589580509311,18.6416238958965,14.6019652173959,6.79785781233948,7.25576536715402,7.35559811048003,11.5167738223501,10.4527950300935,15.5056975900933,12.7236805317127,9.9819265947722,9.48110273807448,10.5418608574999,15.470331487228,15.6602218646742,4.50152735078276,5.6917820864412,5.14408884075822,7.09360934569094,8.02659679209317,9.70839221552514,8.22055362609418,7.50949465803873,4.66030555900404,16.0985730580122,30.1741842882908,15.5005849628069,11.1578911117088,10.0272768962635,11.1615811826642,17.488850197791,9.08583979851498,30.9276294244113,9.90656966223468,16.6675074632741,32.5877430618115,38.4110779896081,33.1728351149458,27.8764625189923,23.0919896334036,25.8433951014272,8.59203556213602,5.53587988766987,7.1161813494397,5.61627772273367,6.89991376847747,7.86105229486239,10.1148259788616,13.6378201946804,18.061159996898,17.498021394392,25.474911836564,2.81846469342095,7.92437694033088,5.12921320417003,10.3059129822345,5.94135187997563,7.26511339610346,13.848154160199,9.50492009360836,7.23529476537405,2.89900944991207,3.16833006883652,38.5533567166377,7.29810775044591,7.70332178736204,13.6416864126685,19.5139098277555,25.4312134120019,25.3612398487134,26.1410463099002,29.1793040350147,36.7316808077099,30.1470293559153,37.0339946811059,29.6332472252215,49.2051758184405,14.964205318604,3.7737612073591,3.58855426437903,2.01461539636894,16.6143050867684,17.6421526924111,11.1722490803032,9.86094543763703,19.0597399533438,1.6942555278512,3.22227665555024,2.86447756719698,2.40594455281163,3.42541259885321,0.755393897389701,2.02506750069542,4.5032120322422,3.62513927187364,3.62432218226274,5.29315472679301,7.98049746802062,3.92687293234509,7.77941494618541,6.91723436672342,9.92754945630076,14.6682840349066,12.9802086060503,11.2321723357135,11.6240717411347,15.2087579934144,14.5242282867279,11.2369808963859,13.2532065478079,12.0614484806788,14.2888107384922,11.7043169204304,11.1887347868949,13.1867488257058,13.5423006523646,12.6861623382604,12.4233064311536,14.0677352068919,12.9358310802772,13.7399695406383,12.1845035364014,10.0610385080025,16.5733918205841,12.9013908153569,15.1508413347589,12.8125819574108,14.0861409797056,14.3230865109391,11.1554525653896,15.4325288784913,6.24526444844865,8.88940112092552,12.8922632428979,21.998158187917,18.0884963678003,18.0856911783929 | ||
|short_description=p1@Aff1 | |short_description=p1@Aff1 | ||
}} | }} |
Latest revision as of 12:37, 1 October 2015
Short description: | p1@Aff1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Aff1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000054979, NM_133919, uc008yjt.1_5end |
EntrezGene: | Aff1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.76e-11 | 114 |
endo-epithelium | 2.38e-11 | 69 |
digestive system | 3.02e-11 | 116 |
digestive tract | 3.02e-11 | 116 |
primitive gut | 3.02e-11 | 116 |
endoderm-derived structure | 1.41e-10 | 118 |
endoderm | 1.41e-10 | 118 |
presumptive endoderm | 1.41e-10 | 118 |
gut epithelium | 1.71e-10 | 55 |
foregut | 3.23e-09 | 80 |
unilaminar epithelium | 1.39e-08 | 66 |
hemopoietic organ | 2.09e-07 | 29 |
immune organ | 2.09e-07 | 29 |
primordium | 6.46e-07 | 134 |
mixed endoderm/mesoderm-derived structure | 7.30e-07 | 35 |