FFCP PHASE1:Hg19::chr10:101690591..101690600,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23268 | |EntrezGene=23268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30373 | |HGNC=30373 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=152bp_to_ENST00000543621,uc001kqh.2_5end | |association_with_transcript=152bp_to_ENST00000543621,uc001kqh.2_5end | ||
|cluster_id=chr10:101690591..101690600,- | |||
|description=CAGE_peak_5_at_DNMBP_5end | |description=CAGE_peak_5_at_DNMBP_5end | ||
|id=chr10:101690591..101690600,- | |id=chr10:101690591..101690600,- | ||
|ontology_enrichment_celltype=CL:1000507!8.78e-11!12;CL:1000494!8.78e-11!12;CL:0000066!1.00e-08!254;CL:1000449!8.63e-08!16;CL:1000497!8.51e-07!18;CL:0002518!8.51e-07!18 | |ontology_enrichment_celltype=CL:1000507!8.78e-11!12;CL:1000494!8.78e-11!12;CL:0000066!1.00e-08!254;CL:1000449!8.63e-08!16;CL:1000497!8.51e-07!18;CL:0002518!8.51e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.43e-08;10!CL:1000494;3.43e-08;10!CL:0000239;2.05e-07;3!CL:1000615;2.05e-07;3!CL:0000322;2.05e-07;3!CL:0002306;2.05e-07;3!CL:0002231;2.88e-07;3!CL:0000182;5.72e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,4.54e-11,58;CL:1000507,3.25e-08,10;CL:1000494,3.25e-08,10;CL:0000322,1.82e-07,3;CL:0000239,1.93e-07,3;CL:1000615,1.93e-07,3;CL:0002306,1.93e-07,3;CL:0002231,3.16e-07,3;CL:0000182,5.98e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000223;2.86e-08;58 | |||
|ontology_enrichment_disease=DOID:305!1.48e-12!106;DOID:0050687!8.01e-11!143;DOID:299!2.64e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:1799;3.56e-19;1!DOID:10165;3.56e-19;1!DOID:1798;3.56e-19;1!DOID:3910;1.72e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.71e-19,1;DOID:10165,2.71e-19,1;DOID:1798,2.71e-19,1;DOID:3910,1.43e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000058!7.24e-18!26;UBERON:0000466!1.81e-15!126;UBERON:0004119!3.10e-14!169;UBERON:0000925!3.10e-14!169;UBERON:0006595!3.10e-14!169;UBERON:0001007!2.41e-13!155;UBERON:0001555!2.41e-13!155;UBERON:0007026!2.41e-13!155;UBERON:0004921!2.55e-12!129;UBERON:0004185!2.55e-12!129;UBERON:0005911!3.29e-12!82;UBERON:0006554!5.87e-12!44;UBERON:0001008!1.33e-11!45;UBERON:0005177!2.12e-11!107;UBERON:0000080!3.63e-11!18;UBERON:0002120!3.63e-11!18;UBERON:0004875!3.63e-11!18;UBERON:0005721!3.63e-11!18;UBERON:0005754!3.63e-11!18;UBERON:0007297!3.63e-11!18;UBERON:0009773!8.78e-11!12;UBERON:0001231!8.78e-11!12;UBERON:0004810!8.78e-11!12;UBERON:0000464!1.38e-10!104;UBERON:0002113!1.75e-10!27;UBERON:0003918!1.75e-10!27;UBERON:0005095!1.75e-10!27;UBERON:0007687!1.75e-10!27;UBERON:0005172!2.75e-10!55;UBERON:0005173!2.75e-10!55;UBERON:0000489!5.72e-10!32;UBERON:0004876!7.33e-10!20;UBERON:0005409!1.18e-09!35;UBERON:0000160!1.44e-09!27;UBERON:0006555!1.84e-09!17;UBERON:0005103!1.84e-09!17;UBERON:0000083!1.84e-09!17;UBERON:0009201!1.84e-09!17;UBERON:0004819!1.84e-09!17;UBERON:0006553!1.84e-09!17;UBERON:0003074!1.84e-09!17;UBERON:0003060!1.84e-09!17;UBERON:0003064!1.98e-09!37;UBERON:0000077!2.19e-09!130;UBERON:0003887!2.65e-09!21;UBERON:0003886!2.67e-09!63;UBERON:0002553!4.30e-09!70;UBERON:0006947!5.74e-09!3;UBERON:0004054!5.74e-09!3;UBERON:0002417!7.30e-09!61;UBERON:0000916!7.30e-09!61;UBERON:0003929!1.31e-08!54;UBERON:0009856!2.46e-08!26;UBERON:0004211!8.63e-08!16;UBERON:0001285!8.63e-08!16;UBERON:0007684!8.63e-08!16;UBERON:0003220!8.63e-08!16;UBERON:0004208!8.63e-08!16;UBERON:0009569!1.14e-07!113;UBERON:0009854!1.14e-07!23;UBERON:0003104!3.71e-07!238;UBERON:0009142!3.71e-07!238;UBERON:0007499!4.45e-07!25;UBERON:0009497!5.68e-07!25;UBERON:0000015!5.68e-07!25;UBERON:0002423!5.68e-07!25;UBERON:0006235!5.68e-07!25;UBERON:0004161!5.68e-07!25;UBERON:0005904!8.32e-07!4 | |ontology_enrichment_uberon=UBERON:0000058!7.24e-18!26;UBERON:0000466!1.81e-15!126;UBERON:0004119!3.10e-14!169;UBERON:0000925!3.10e-14!169;UBERON:0006595!3.10e-14!169;UBERON:0001007!2.41e-13!155;UBERON:0001555!2.41e-13!155;UBERON:0007026!2.41e-13!155;UBERON:0004921!2.55e-12!129;UBERON:0004185!2.55e-12!129;UBERON:0005911!3.29e-12!82;UBERON:0006554!5.87e-12!44;UBERON:0001008!1.33e-11!45;UBERON:0005177!2.12e-11!107;UBERON:0000080!3.63e-11!18;UBERON:0002120!3.63e-11!18;UBERON:0004875!3.63e-11!18;UBERON:0005721!3.63e-11!18;UBERON:0005754!3.63e-11!18;UBERON:0007297!3.63e-11!18;UBERON:0009773!8.78e-11!12;UBERON:0001231!8.78e-11!12;UBERON:0004810!8.78e-11!12;UBERON:0000464!1.38e-10!104;UBERON:0002113!1.75e-10!27;UBERON:0003918!1.75e-10!27;UBERON:0005095!1.75e-10!27;UBERON:0007687!1.75e-10!27;UBERON:0005172!2.75e-10!55;UBERON:0005173!2.75e-10!55;UBERON:0000489!5.72e-10!32;UBERON:0004876!7.33e-10!20;UBERON:0005409!1.18e-09!35;UBERON:0000160!1.44e-09!27;UBERON:0006555!1.84e-09!17;UBERON:0005103!1.84e-09!17;UBERON:0000083!1.84e-09!17;UBERON:0009201!1.84e-09!17;UBERON:0004819!1.84e-09!17;UBERON:0006553!1.84e-09!17;UBERON:0003074!1.84e-09!17;UBERON:0003060!1.84e-09!17;UBERON:0003064!1.98e-09!37;UBERON:0000077!2.19e-09!130;UBERON:0003887!2.65e-09!21;UBERON:0003886!2.67e-09!63;UBERON:0002553!4.30e-09!70;UBERON:0006947!5.74e-09!3;UBERON:0004054!5.74e-09!3;UBERON:0002417!7.30e-09!61;UBERON:0000916!7.30e-09!61;UBERON:0003929!1.31e-08!54;UBERON:0009856!2.46e-08!26;UBERON:0004211!8.63e-08!16;UBERON:0001285!8.63e-08!16;UBERON:0007684!8.63e-08!16;UBERON:0003220!8.63e-08!16;UBERON:0004208!8.63e-08!16;UBERON:0009569!1.14e-07!113;UBERON:0009854!1.14e-07!23;UBERON:0003104!3.71e-07!238;UBERON:0009142!3.71e-07!238;UBERON:0007499!4.45e-07!25;UBERON:0009497!5.68e-07!25;UBERON:0000015!5.68e-07!25;UBERON:0002423!5.68e-07!25;UBERON:0006235!5.68e-07!25;UBERON:0004161!5.68e-07!25;UBERON:0005904!8.32e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.72e-10;2!UBERON:0002173;1.72e-10;2!UBERON:0002186;1.72e-10;2!UBERON:0004211;3.43e-08;10!UBERON:0009773;3.43e-08;10!UBERON:0001231;3.43e-08;10!UBERON:0004810;3.43e-08;10!UBERON:0002113;1.99e-07;24!UBERON:0011143;1.99e-07;24!UBERON:0004821;2.05e-07;3!UBERON:0007499;2.05e-07;3!UBERON:0003215;2.05e-07;3!UBERON:0006853;2.05e-07;3!UBERON:0007685;2.05e-07;3!UBERON:0010368;2.05e-07;3!UBERON:0009911;2.05e-07;3!UBERON:0002299;2.05e-07;3!UBERON:0004134;2.05e-07;3!UBERON:0006524;2.05e-07;3!UBERON:0008874;2.05e-07;3!UBERON:0002169;2.05e-07;3!UBERON:0004894;2.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.43e-10,2;UBERON:0002173,1.43e-10,2;UBERON:0002186,1.43e-10,2;UBERON:0005177,1.83e-08,101;UBERON:0005172,1.86e-08,54;UBERON:0005173,1.86e-08,54;UBERON:0004810,3.25e-08,10;UBERON:0002417,1.30e-07,60;UBERON:0000916,1.30e-07,60;UBERON:0004821,1.82e-07,3;UBERON:0003215,1.82e-07,3;UBERON:0010368,1.82e-07,3;UBERON:0009911,1.82e-07,3;UBERON:0002299,1.82e-07,3;UBERON:0006524,1.82e-07,3;UBERON:0008874,1.82e-07,3;UBERON:0002169,1.82e-07,3;UBERON:0004894,1.82e-07,3;UBERON:0006853,1.93e-07,3;UBERON:0007685,1.93e-07,3;UBERON:0004134,1.93e-07,3;UBERON:0007499,3.72e-07,25;UBERON:0009856,6.70e-07,26;UBERON:0002113,6.83e-07,26;UBERON:0003918,6.83e-07,26;UBERON:0011143,6.83e-07,26;UBERON:0005095,6.83e-07,26;UBERON:0007687,6.83e-07,26 | |||
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| ||
|short_description=p5@DNMBP | |short_description=p5@DNMBP | ||
}} | }} |
Latest revision as of 19:25, 15 September 2015
Short description: | p5@DNMBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DNMBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 152bp_to_ENST00000543621, uc001kqh.2_5end |
EntrezGene: | DNMBP |
HGNC: | 30373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.54e-11 | 58 |
kidney tubule cell | 3.25e-08 | 10 |
nephron tubule epithelial cell | 3.25e-08 | 10 |
pneumocyte | 1.82e-07 | 3 |
brush border epithelial cell | 1.93e-07 | 3 |
kidney cortex tubule cell | 1.93e-07 | 3 |
epithelial cell of proximal tubule | 1.93e-07 | 3 |
epithelial cell of prostate | 3.16e-07 | 3 |
hepatocyte | 5.98e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.43e-10 | 2 |
alveolar duct | 1.43e-10 | 2 |
bronchiole | 1.43e-10 | 2 |
trunk region element | 1.83e-08 | 101 |
abdomen element | 1.86e-08 | 54 |
abdominal segment element | 1.86e-08 | 54 |
nephron tubule epithelium | 3.25e-08 | 10 |
abdominal segment of trunk | 1.30e-07 | 60 |
abdomen | 1.30e-07 | 60 |
pulmonary alveolus epithelium | 1.82e-07 | 3 |
alveolus | 1.82e-07 | 3 |
pulmonary lobule | 1.82e-07 | 3 |
lobule | 1.82e-07 | 3 |
alveolus of lung | 1.82e-07 | 3 |
alveolar system | 1.82e-07 | 3 |
pulmonary acinus | 1.82e-07 | 3 |
alveolar sac | 1.82e-07 | 3 |
alveolar wall | 1.82e-07 | 3 |
renal cortex tubule | 1.93e-07 | 3 |
region of nephron tubule | 1.93e-07 | 3 |
proximal tubule | 1.93e-07 | 3 |
epithelial sac | 3.72e-07 | 25 |
sac | 6.70e-07 | 26 |
kidney | 6.83e-07 | 26 |
kidney mesenchyme | 6.83e-07 | 26 |
upper urinary tract | 6.83e-07 | 26 |
kidney rudiment | 6.83e-07 | 26 |
kidney field | 6.83e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.71e-19 | 1 |
endocrine pancreas cancer | 2.71e-19 | 1 |
pancreatic endocrine carcinoma | 2.71e-19 | 1 |
lung adenocarcinoma | 1.43e-10 | 2 |