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FFCP PHASE1:Mm9::chr3:88262969..88262996,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20351
|EntrezGene=20351
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-17bp_to_ENSMUST00000135262_5end
|association_with_transcript=-17bp_to_ENSMUST00000135262_5end
|cluster_id=chr3:88262969..88262996,-
|description=CAGE_peak_9_at_Sema4a_5end
|description=CAGE_peak_9_at_Sema4a_5end
|id=chr3:88262969..88262996,-
|id=chr3:88262969..88262996,-
|ontology_enrichment_celltype=CL:0000117!1.94e-18!23;CL:0000337!1.94e-18!23;CL:0000540!3.03e-10!33;CL:0000047!3.03e-10!33;CL:0000031!3.03e-10!33;CL:0000404!3.03e-10!33;CL:0000393!1.74e-07!39;CL:0000211!1.74e-07!39;CL:0002319!9.18e-07!43
|ontology_enrichment_celltype=CL:0000117!1.94e-18!23;CL:0000337!1.94e-18!23;CL:0000540!3.03e-10!33;CL:0000047!3.03e-10!33;CL:0000031!3.03e-10!33;CL:0000404!3.03e-10!33;CL:0000393!1.74e-07!39;CL:0000211!1.74e-07!39;CL:0002319!9.18e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.61e-32,23;CL:0000337,2.61e-32,23;CL:0000540,8.46e-21,33;CL:0000047,8.46e-21,33;CL:0000031,8.46e-21,33;CL:0000404,8.46e-21,33;CL:0000393,9.64e-17,39;CL:0000211,9.64e-17,39;CL:0002319,1.13e-14,43;CL:0000221,3.23e-14,44;CL:0000133,3.23e-14,44;CL:0002609,3.57e-07,6;CL:0002613,4.68e-07,3;CL:0002321,5.17e-07,70;CL:0002614,9.18e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.20e-26!34;UBERON:0001049!1.43e-25!52;UBERON:0005068!1.43e-25!52;UBERON:0006241!1.43e-25!52;UBERON:0007135!1.43e-25!52;UBERON:0000955!3.41e-22!50;UBERON:0006238!3.41e-22!50;UBERON:0002791!3.75e-22!29;UBERON:0003528!3.75e-22!29;UBERON:0001893!3.75e-22!29;UBERON:0002346!7.45e-22!71;UBERON:0003075!7.45e-22!71;UBERON:0007284!7.45e-22!71;UBERON:0001017!8.47e-22!73;UBERON:0005743!8.47e-22!73;UBERON:0000033!1.57e-21!63;UBERON:0002616!2.47e-21!49;UBERON:0003056!3.50e-21!49;UBERON:0000073!1.02e-20!75;UBERON:0001016!1.02e-20!75;UBERON:0003080!1.97e-19!40;UBERON:0002780!1.77e-18!39;UBERON:0001890!1.77e-18!39;UBERON:0006240!1.77e-18!39;UBERON:0004121!9.37e-17!102;UBERON:0000924!9.37e-17!102;UBERON:0006601!9.37e-17!102;UBERON:0000956!8.42e-15!21;UBERON:0001869!8.42e-15!21;UBERON:0000203!8.42e-15!21;UBERON:0002619!5.56e-12!17;UBERON:0000153!1.52e-11!94;UBERON:0007811!1.99e-11!86;UBERON:0002021!1.46e-10!10;UBERON:0000411!1.46e-10!10;UBERON:0001950!1.46e-10!10;UBERON:0002420!1.35e-08!8;UBERON:0007245!1.35e-08!8;UBERON:0010009!1.35e-08!8;UBERON:0010011!1.35e-08!8;UBERON:0000454!1.35e-08!8
|ontology_enrichment_uberon=UBERON:0002020!1.20e-26!34;UBERON:0001049!1.43e-25!52;UBERON:0005068!1.43e-25!52;UBERON:0006241!1.43e-25!52;UBERON:0007135!1.43e-25!52;UBERON:0000955!3.41e-22!50;UBERON:0006238!3.41e-22!50;UBERON:0002791!3.75e-22!29;UBERON:0003528!3.75e-22!29;UBERON:0001893!3.75e-22!29;UBERON:0002346!7.45e-22!71;UBERON:0003075!7.45e-22!71;UBERON:0007284!7.45e-22!71;UBERON:0001017!8.47e-22!73;UBERON:0005743!8.47e-22!73;UBERON:0000033!1.57e-21!63;UBERON:0002616!2.47e-21!49;UBERON:0003056!3.50e-21!49;UBERON:0000073!1.02e-20!75;UBERON:0001016!1.02e-20!75;UBERON:0003080!1.97e-19!40;UBERON:0002780!1.77e-18!39;UBERON:0001890!1.77e-18!39;UBERON:0006240!1.77e-18!39;UBERON:0004121!9.37e-17!102;UBERON:0000924!9.37e-17!102;UBERON:0006601!9.37e-17!102;UBERON:0000956!8.42e-15!21;UBERON:0001869!8.42e-15!21;UBERON:0000203!8.42e-15!21;UBERON:0002619!5.56e-12!17;UBERON:0000153!1.52e-11!94;UBERON:0007811!1.99e-11!86;UBERON:0002021!1.46e-10!10;UBERON:0000411!1.46e-10!10;UBERON:0001950!1.46e-10!10;UBERON:0002420!1.35e-08!8;UBERON:0007245!1.35e-08!8;UBERON:0010009!1.35e-08!8;UBERON:0010011!1.35e-08!8;UBERON:0000454!1.35e-08!8
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.27e-49,34;UBERON:0000073,2.82e-44,54;UBERON:0001049,1.47e-43,52;UBERON:0005068,1.47e-43,52;UBERON:0006241,1.47e-43,52;UBERON:0007135,1.47e-43,52;UBERON:0001017,6.38e-41,73;UBERON:0003528,3.64e-40,29;UBERON:0002791,3.64e-40,29;UBERON:0001893,3.64e-40,29;UBERON:0001016,1.44e-39,75;UBERON:0002346,1.26e-35,64;UBERON:0003075,1.26e-35,64;UBERON:0007284,1.26e-35,64;UBERON:0000955,1.84e-35,47;UBERON:0006238,1.84e-35,47;UBERON:0003080,9.07e-35,40;UBERON:0002616,7.46e-34,46;UBERON:0002780,6.28e-33,39;UBERON:0001890,6.28e-33,39;UBERON:0006240,6.28e-33,39;UBERON:0004121,1.02e-30,95;UBERON:0000924,1.02e-30,95;UBERON:0006601,1.02e-30,95;UBERON:0010371,4.36e-30,73;UBERON:0003056,6.49e-29,49;UBERON:0000956,6.79e-26,21;UBERON:0001869,6.79e-26,21;UBERON:0000203,6.79e-26,21;UBERON:0002619,6.45e-23,17;UBERON:0010314,5.96e-22,92;UBERON:0002021,4.57e-19,10;UBERON:0000411,4.57e-19,10;UBERON:0001950,4.57e-19,10;UBERON:0002420,3.05e-15,8;UBERON:0007245,3.05e-15,8;UBERON:0010009,3.05e-15,8;UBERON:0010011,3.05e-15,8;UBERON:0000454,3.05e-15,8;UBERON:0000025,6.83e-15,114;UBERON:0004111,2.54e-13,122;UBERON:0002240,5.73e-11,6;UBERON:0005174,5.73e-11,6;UBERON:0001137,5.73e-11,6;UBERON:0000369,4.63e-10,5;UBERON:0002435,4.63e-10,5;UBERON:0000204,4.63e-10,5;UBERON:0010082,4.63e-10,5;UBERON:0001948,1.54e-09,5;UBERON:0002315,1.54e-09,5;UBERON:0011216,3.68e-09,194;UBERON:0003076,8.99e-09,12;UBERON:0003057,8.99e-09,12;UBERON:0002950,1.16e-08,4;UBERON:0001891,1.16e-08,4;UBERON:0009616,1.16e-08,4;UBERON:0010286,1.16e-08,4;UBERON:0000483,2.74e-07,174;UBERON:0000119,4.19e-07,176;UBERON:0002038,9.18e-07,3;UBERON:0009663,9.18e-07,3;UBERON:0009661,9.18e-07,3;UBERON:0000125,9.18e-07,3;UBERON:0002308,9.18e-07,3
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06949382578793,4.7609188134483,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.622137673850866,2.56511282830212,1.05162480675691,5.42736870367227,2.87129103237098,2.44981598429908,2.49198224647415,6.43453150627015,0,3.95830748064082,3.84016333140609,5.93488294785872,4.94033275453012,5.73004707612436,4.4669279840221,6.19038871034848,4.12555268997387,2.94628585473668,4.41352210477219,4.10078780815661,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,6.14141621559773,1.37250180845588,5.15182843662744,5.38855392596057,6.90431734791892,3.1168206683934,2.75810147215188,0,0,0,0.420883711772948,0,0,0.180062129805349,0.452114453507145,1.2246569847239,0.512454881139399,0.374806898238915,0.517406741478031,0.215567992932842,0.756424320671277,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,2.52347938276953,2.57261530948211,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,0,0,0,0,2.0871576698413,4.33683240391152,0,0,0,0,0,0,0,0,0,0,0,4.17717711348349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,4.51801474093653,8.74617949363636,4.01026859407578,4.46818274093588,4.7955776383945,1.5107877947794,8.77529250301348,8.55610286126019,3.62513927187364,7.24864436452548,0.31136204275253,0.798049746802062,0.512200817262403,0,0.838452650511929,0,0.222246727801615,1.23621034343337,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.37456602987953,0.576226371643824,0.402048282689293,0.952587382566147,0.927074607558844,0.578727661391115,0,0.588795680537589,1.02860775715625,0.354951612318675,0.715308569841963,0.581385666529314,0.376437521661322,0.507687647350059,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.591026894253381,0,0.77468420592983,0.964533054905707,1.24905288968973,0.467863216890817,0.644613162144895,0.57386499620653,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06949382578793,4.7609188134483,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.622137673850866,2.56511282830212,1.05162480675691,5.42736870367227,2.87129103237098,2.44981598429908,2.49198224647415,6.43453150627015,0,3.95830748064082,3.84016333140609,5.93488294785872,4.94033275453012,5.73004707612436,4.4669279840221,6.19038871034848,4.12555268997387,2.94628585473668,4.41352210477219,4.10078780815661,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,6.14141621559773,1.37250180845588,5.15182843662744,5.38855392596057,6.90431734791892,3.1168206683934,2.75810147215188,0,0,0,0.420883711772948,0,0,0.180062129805349,0.452114453507145,1.2246569847239,0.512454881139399,0.374806898238915,0.517406741478031,0.215567992932842,0.756424320671277,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,2.52347938276953,2.57261530948211,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,0,0,0,0,2.0871576698413,4.33683240391152,0,0,0,0,0,0,0,0,0,0,0,4.17717711348349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,4.51801474093653,8.74617949363636,4.01026859407578,4.46818274093588,4.7955776383945,1.5107877947794,8.77529250301348,8.55610286126019,3.62513927187364,7.24864436452548,0.31136204275253,0.798049746802062,0.512200817262403,0,0.838452650511929,0,0.222246727801615,1.23621034343337,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.37456602987953,0.576226371643824,0.402048282689293,0.952587382566147,0.927074607558844,0.578727661391115,0,0.588795680537589,1.02860775715625,0.354951612318675,0.715308569841963,0.581385666529314,0.376437521661322,0.507687647350059,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.591026894253381,0,0.77468420592983,0.964533054905707,1.24905288968973,0.467863216890817,0.644613162144895,0.57386499620653,0,0.231867835620421
|short_description=p9@Sema4a
|short_description=p9@Sema4a
}}
}}

Latest revision as of 19:49, 25 September 2015

Short description:p9@Sema4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Sema4a_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -17bp_to_ENSMUST00000135262_5end
EntrezGene:Sema4a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Sema4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.07
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.94
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F15.15
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter6.27e-4934
regional part of nervous system2.82e-4454
neural tube1.47e-4352
neural rod1.47e-4352
future spinal cord1.47e-4352
neural keel1.47e-4352
central nervous system6.38e-4173
brain grey matter3.64e-4029
regional part of telencephalon3.64e-4029
telencephalon3.64e-4029
nervous system1.44e-3975
neurectoderm1.26e-3564
neural plate1.26e-3564
presumptive neural plate1.26e-3564
brain1.84e-3547
future brain1.84e-3547
anterior neural tube9.07e-3540
regional part of brain7.46e-3446
regional part of forebrain6.28e-3339
forebrain6.28e-3339
future forebrain6.28e-3339
ectoderm-derived structure1.02e-3095
ectoderm1.02e-3095
presumptive ectoderm1.02e-3095
ecto-epithelium4.36e-3073
pre-chordal neural plate6.49e-2949
cerebral cortex6.79e-2621
cerebral hemisphere6.79e-2621
pallium6.79e-2621
regional part of cerebral cortex6.45e-2317
structure with developmental contribution from neural crest5.96e-2292
occipital lobe4.57e-1910
visual cortex4.57e-1910
neocortex4.57e-1910
basal ganglion3.05e-158
nuclear complex of neuraxis3.05e-158
aggregate regional part of brain3.05e-158
collection of basal ganglia3.05e-158
cerebral subcortex3.05e-158
tube6.83e-15114
anatomical conduit2.54e-13122
spinal cord5.73e-116
dorsal region element5.73e-116
dorsum5.73e-116
corpus striatum4.63e-105
striatum4.63e-105
ventral part of telencephalon4.63e-105
future corpus striatum4.63e-105
regional part of spinal cord1.54e-095
gray matter of spinal cord1.54e-095
organ system subdivision3.68e-09194
posterior neural tube8.99e-0912
chordal neural plate8.99e-0912
regional part of midbrain1.16e-084
midbrain1.16e-084
presumptive midbrain1.16e-084
midbrain neural tube1.16e-084
epithelium2.74e-07174
cell layer4.19e-07176
substantia nigra9.18e-073
telencephalic nucleus9.18e-073
midbrain nucleus9.18e-073
neural nucleus9.18e-073
nucleus of brain9.18e-073
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