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FFCP PHASE1:Mm9::chr3:88260319..88260363,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20351
|EntrezGene=20351
|HGNC=
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=D3YWK5,D3YVM6
|UniProt=D3YWK5,D3YVM6
|association_with_transcript=0bp_to_ENSMUST00000123753,ENSMUST00000141471,ENSMUST00000146921_5end
|association_with_transcript=0bp_to_ENSMUST00000123753,ENSMUST00000141471,ENSMUST00000146921_5end
|cluster_id=chr3:88260319..88260363,-
|description=CAGE_peak_3_at_Sema4a_5end
|description=CAGE_peak_3_at_Sema4a_5end
|id=chr3:88260319..88260363,-
|id=chr3:88260319..88260363,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,4.59e-07,9;CL:0002251,4.59e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!4.80e-23!43;UBERON:0005409!1.56e-22!59;UBERON:0004119!5.20e-22!130;UBERON:0000925!5.20e-22!130;UBERON:0006595!5.20e-22!130;UBERON:0001007!1.37e-21!128;UBERON:0001555!1.37e-21!128;UBERON:0007026!1.37e-21!128;UBERON:0004921!2.73e-20!126;UBERON:0004185!2.73e-20!126;UBERON:0005172!1.07e-12!49;UBERON:0005173!1.07e-12!49;UBERON:0002417!1.07e-12!49;UBERON:0000916!1.07e-12!49;UBERON:0009854!6.53e-12!23;UBERON:0009856!6.53e-12!23;UBERON:0002107!2.80e-11!22;UBERON:0007499!2.80e-11!22;UBERON:0006925!2.80e-11!22;UBERON:0009497!2.80e-11!22;UBERON:0000015!2.80e-11!22;UBERON:0002423!2.80e-11!22;UBERON:0006235!2.80e-11!22;UBERON:0008835!2.80e-11!22;UBERON:0003894!2.80e-11!22;UBERON:0004161!2.80e-11!22;UBERON:0008836!2.80e-11!22;UBERON:0000344!2.46e-10!15;UBERON:0005177!6.05e-10!85;UBERON:0001242!4.78e-09!13;UBERON:0000060!4.78e-09!13;UBERON:0001262!4.78e-09!13;UBERON:0004786!4.78e-09!13;UBERON:0002365!1.01e-08!25;UBERON:0002330!1.01e-08!25;UBERON:0009569!1.10e-08!66;UBERON:0004923!8.91e-08!24;UBERON:0003929!1.53e-07!55;UBERON:0002108!2.03e-07!16;UBERON:0002100!7.64e-07!98;UBERON:0000466!7.88e-07!79
|ontology_enrichment_uberon=UBERON:0000160!4.80e-23!43;UBERON:0005409!1.56e-22!59;UBERON:0004119!5.20e-22!130;UBERON:0000925!5.20e-22!130;UBERON:0006595!5.20e-22!130;UBERON:0001007!1.37e-21!128;UBERON:0001555!1.37e-21!128;UBERON:0007026!1.37e-21!128;UBERON:0004921!2.73e-20!126;UBERON:0004185!2.73e-20!126;UBERON:0005172!1.07e-12!49;UBERON:0005173!1.07e-12!49;UBERON:0002417!1.07e-12!49;UBERON:0000916!1.07e-12!49;UBERON:0009854!6.53e-12!23;UBERON:0009856!6.53e-12!23;UBERON:0002107!2.80e-11!22;UBERON:0007499!2.80e-11!22;UBERON:0006925!2.80e-11!22;UBERON:0009497!2.80e-11!22;UBERON:0000015!2.80e-11!22;UBERON:0002423!2.80e-11!22;UBERON:0006235!2.80e-11!22;UBERON:0008835!2.80e-11!22;UBERON:0003894!2.80e-11!22;UBERON:0004161!2.80e-11!22;UBERON:0008836!2.80e-11!22;UBERON:0000344!2.46e-10!15;UBERON:0005177!6.05e-10!85;UBERON:0001242!4.78e-09!13;UBERON:0000060!4.78e-09!13;UBERON:0001262!4.78e-09!13;UBERON:0004786!4.78e-09!13;UBERON:0002365!1.01e-08!25;UBERON:0002330!1.01e-08!25;UBERON:0009569!1.10e-08!66;UBERON:0004923!8.91e-08!24;UBERON:0003929!1.53e-07!55;UBERON:0002108!2.03e-07!16;UBERON:0002100!7.64e-07!98;UBERON:0000466!7.88e-07!79
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.12e-22,31;UBERON:0005409,1.01e-18,47;UBERON:0009854,1.12e-13,23;UBERON:0009856,1.12e-13,23;UBERON:0004119,6.16e-13,118;UBERON:0000925,6.16e-13,118;UBERON:0006595,6.16e-13,118;UBERON:0002107,6.17e-13,22;UBERON:0007499,6.17e-13,22;UBERON:0006925,6.17e-13,22;UBERON:0009497,6.17e-13,22;UBERON:0000015,6.17e-13,22;UBERON:0002423,6.17e-13,22;UBERON:0006235,6.17e-13,22;UBERON:0008835,6.17e-13,22;UBERON:0003894,6.17e-13,22;UBERON:0004161,6.17e-13,22;UBERON:0008836,6.17e-13,22;UBERON:0001007,1.45e-12,116;UBERON:0001555,1.45e-12,116;UBERON:0007026,1.45e-12,116;UBERON:0000344,7.83e-12,15;UBERON:0004921,1.78e-11,114;UBERON:0005172,9.02e-11,49;UBERON:0005173,9.02e-11,49;UBERON:0002417,9.02e-11,49;UBERON:0000916,9.02e-11,49;UBERON:0002365,2.19e-10,25;UBERON:0002330,2.19e-10,25;UBERON:0001242,2.53e-10,13;UBERON:0001262,2.53e-10,13;UBERON:0004786,2.53e-10,13;UBERON:0005177,1.01e-08,79;UBERON:0004923,1.14e-07,24;UBERON:0003350,4.59e-07,9;UBERON:0004808,4.59e-07,9;UBERON:0001277,4.59e-07,9;UBERON:0003104,4.80e-07,61;UBERON:0009142,4.80e-07,61
|phase1_expression=0,49.2055324771499,41.4049307844478,88.6220139129012,68.1218192727032,17.4594442788365,19.3898491694286,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95006494767516,0,0,36.1582875513099,35.3290292843442,36.1766137392463,20.6765758156356,27.149375318422,70.6887120377711,41.8370015401485,22.1730510655305,0,0,0,7.51014211353314,6.64938581433969,7.55426618170766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76823835312181,11.185510400758,5.439770669662,19.9690180905992,16.2444104361917,9.85659151614138,15.0275529540974,0,0,0,0,0,0,0,0,0,0,26.3764762151029,0,0,1.73485326766136,3.04465478312141,4.15107895060905,0.904335843315735,0.470354828542819,0.753999547978053,50.1805784500779,0,0,0,0,0,31.6865994070808,0,0,26.5675337416935,0,0,0,0,0,0,0,0,0,0,0.712875546952214,4.22983700074316,19.7123751578266,0,0,0,0,0.452114453507145,0,0,0,0,0,0.567318240503458,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,125.559137533843,57.9146740993162,2.13288250535234,1.39342003116263,8.76298736990235,29.6474781196314,39.360913760542,50.4097909198282,22.7773949541366,71.8087442596687,31.668236308834,36.8069473276129,36.0683561170372,17.9763881730844,38.6887109275703,46.7981992147763,0.758671603812327,2.62771579002376,6.76246414038483,6.72049381889537,14.9343415119072,14.4479788974056,19.3503803600227,13.727743762103,47.7276132637779,58.120064207168,17.4907049981418,6.00642380577939,7.27268281918851,5.39669069723649,15.8230894683032,20.9824128984603,30.0458505102075,16.1109836972454,22.0503908414048,26.0833342528677,23.0029130443767,36.8419538191818,23.0907878104775,27.2785188182881,28.7035861635059,36.1832641022525,0.739012760666419,0.568474235311454,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.491589944147214,0.345369963731791,1.59113964439663,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,1.13552068166615,0.712262414669021,0.325773918707152,1.97964147567043,6.63725691699814,7.04063844849446,8.46505959501303,6.97838795096823,14.1744908582771,11.0676653259814,16.2809824695979,7.27067458955011,8.19943970284859,4.10847785316561,4.21674434299995,6.18813259489121,0,0,0,0,0,0,0,0,2.11204537257339,3.1774810629573,10.1443063105282,0,0.161464426695906,0,0.238744688006273,0.164140899745061,16.3229268512716,0,0,0.82554747185289,0.185194527369712,0.188368457004691,0,0,0,0,0,13.3653886522116,0.790839983952838,4.26970880966382,3.24016022465404,2.92723614420256,5.8957892211468,6.20375993370175,5.20716771069616,8.89970202745701,61.955957233477,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.39061315453185,0.104859344425711,0,0.576060012515731,0.632022241256357,0,0.102710957164827,0,0.179026695667481,0,0.600977247599844,0,0.302899349844443,0.15241361331,0.100826185136841,0.194915761479505,0.384847366561318,0.818138315270983,0,0,0,0,0.19318959403219,3.37828455812128,5.86085197655248,0.428736758158132,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,0.512200817262403,1.70174701947806,1.88651846365184,3.49302666055027,6.22290837844523,6.79915688888351,6.4183841918363,6.82282471762253,6.08350319736575,3.9611531691076,5.43120743325318,4.22566005872137,5.74354689556133,3.33405583898152,6.2577536010222,6.36600427530227,4.53294490883637,5.7407578852415,4.11443102862498,4.61437096014278,4.29185141905178,6.24989591519013,5.55245344450451,5.753793336634,4.20734337607377,7.3659519202596,6.65440157844723,9.53941861818155,4.27086065247027,5.31924204828043,7.36615877705441,4.33823155320705,2.3148793317737,0,2.10538447600868,3.00819475667618,0,0.220591419119515,0.231867835620421
|phase1_expression=0,49.2055324771499,41.4049307844478,88.6220139129012,68.1218192727032,17.4594442788365,19.3898491694286,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95006494767516,0,0,36.1582875513099,35.3290292843442,36.1766137392463,20.6765758156356,27.149375318422,70.6887120377711,41.8370015401485,22.1730510655305,0,0,0,7.51014211353314,6.64938581433969,7.55426618170766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76823835312181,11.185510400758,5.439770669662,19.9690180905992,16.2444104361917,9.85659151614138,15.0275529540974,0,0,0,0,0,0,0,0,0,0,26.3764762151029,0,0,1.73485326766136,3.04465478312141,4.15107895060905,0.904335843315735,0.470354828542819,0.753999547978053,50.1805784500779,0,0,0,0,0,31.6865994070808,0,0,26.5675337416935,0,0,0,0,0,0,0,0,0,0,0.712875546952214,4.22983700074316,19.7123751578266,0,0,0,0,0.452114453507145,0,0,0,0,0,0.567318240503458,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,125.559137533843,57.9146740993162,2.13288250535234,1.39342003116263,8.76298736990235,29.6474781196314,39.360913760542,50.4097909198282,22.7773949541366,71.8087442596687,31.668236308834,36.8069473276129,36.0683561170372,17.9763881730844,38.6887109275703,46.7981992147763,0.758671603812327,2.62771579002376,6.76246414038483,6.72049381889537,14.9343415119072,14.4479788974056,19.3503803600227,13.727743762103,47.7276132637779,58.120064207168,17.4907049981418,6.00642380577939,7.27268281918851,5.39669069723649,15.8230894683032,20.9824128984603,30.0458505102075,16.1109836972454,22.0503908414048,26.0833342528677,23.0029130443767,36.8419538191818,23.0907878104775,27.2785188182881,28.7035861635059,36.1832641022525,0.739012760666419,0.568474235311454,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.491589944147214,0.345369963731791,1.59113964439663,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,1.13552068166615,0.712262414669021,0.325773918707152,1.97964147567043,6.63725691699814,7.04063844849446,8.46505959501303,6.97838795096823,14.1744908582771,11.0676653259814,16.2809824695979,7.27067458955011,8.19943970284859,4.10847785316561,4.21674434299995,6.18813259489121,0,0,0,0,0,0,0,0,2.11204537257339,3.1774810629573,10.1443063105282,0,0.161464426695906,0,0.238744688006273,0.164140899745061,16.3229268512716,0,0,0.82554747185289,0.185194527369712,0.188368457004691,0,0,0,0,0,13.3653886522116,0.790839983952838,4.26970880966382,3.24016022465404,2.92723614420256,5.8957892211468,6.20375993370175,5.20716771069616,8.89970202745701,61.955957233477,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.39061315453185,0.104859344425711,0,0.576060012515731,0.632022241256357,0,0.102710957164827,0,0.179026695667481,0,0.600977247599844,0,0.302899349844443,0.15241361331,0.100826185136841,0.194915761479505,0.384847366561318,0.818138315270983,0,0,0,0,0.19318959403219,3.37828455812128,5.86085197655248,0.428736758158132,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,0.512200817262403,1.70174701947806,1.88651846365184,3.49302666055027,6.22290837844523,6.79915688888351,6.4183841918363,6.82282471762253,6.08350319736575,3.9611531691076,5.43120743325318,4.22566005872137,5.74354689556133,3.33405583898152,6.2577536010222,6.36600427530227,4.53294490883637,5.7407578852415,4.11443102862498,4.61437096014278,4.29185141905178,6.24989591519013,5.55245344450451,5.753793336634,4.20734337607377,7.3659519202596,6.65440157844723,9.53941861818155,4.27086065247027,5.31924204828043,7.36615877705441,4.33823155320705,2.3148793317737,0,2.10538447600868,3.00819475667618,0,0.220591419119515,0.231867835620421
|short_description=p3@Sema4a
|short_description=p3@Sema4a
}}
}}

Latest revision as of 19:48, 25 September 2015

Short description:p3@Sema4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sema4a_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 0bp_to_ENSMUST00000123753, ENSMUST00000141471, ENSMUST00000146921_5end
EntrezGene:Sema4a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sema4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I549.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I641.40
CD326+ enterocyte, pool1.CNhs13542.11848-124I388.62
CD326+ enterocyte, pool2.CNhs13197.11849-124I468.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.46
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.39
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D136.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D235.33
GP2+ M cell, pool1.CNhs13228.11845-124H936.18
GP2+ M cell, pool2.CNhs13231.11846-124I120.68
GP2+ M cell, pool3.CNhs13240.11847-124I227.15
Ileum epithelium, pool1.CNhs13199.10252-104B970.69
Ileum epithelium, pool2.CNhs13232.10253-104C141.84
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C822.17
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C819.97
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.03
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B626.38
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A850.18
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H431.69
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H726.57
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.23
epididymis, adult.CNhs10490.58-23B219.71
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I3125.56
intestine, adult.CNhs10496.178-9A357.91
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D88.76
intestine, embryo E16.CNhs10585.463-22H429.65
intestine, embryo E17.CNhs10582.482-18D339.36
intestine, embryo E18.CNhs10526.1289-20F750.41
intestine, neonate N00.CNhs11126.644-26D122.78
intestine, neonate N01.CNhs11192.1322-23E971.81
intestine, neonate N06.CNhs11102.688-20B831.67
intestine, neonate N07.CNhs11095.720-20F236.81
intestine, neonate N10.CNhs11098.755-23A536.07
intestine, neonate N20.CNhs11187.827-18D117.98
intestine, neonate N25.CNhs11121.1352-25E338.69
intestine, neonate N30.CNhs11131.1384-42G146.80
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I26.72
kidney, embryo E18.CNhs11001.1288-20C714.93
kidney, neonate N00.CNhs11214.646-21G714.45
kidney, neonate N10.CNhs11206.758-6D519.35
kidney, neonate N20.CNhs11113.832-19I113.73
kidney, neonate N25.CNhs11122.1353-25F347.73
kidney, neonate N30.CNhs11203.1385-42H158.12
liver, adult pregnant day01.CNhs10466.508-5B217.49
liver, embryo E12.CNhs10601.355-15F86.01
liver, embryo E13.CNhs10524.378-3H67.27
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D715.82
liver, embryo E16.CNhs10523.462-17F520.98
liver, embryo E17.CNhs10510.481-18A330.05
liver, embryo E18.CNhs10579.499-43G416.11
liver, neonate N00.CNhs11117.641-24F422.05
liver, neonate N03.CNhs11123.1345-25G226.08
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H236.84
liver, neonate N10.CNhs11115.751-24B923.09
liver, neonate N20.CNhs11220.823-25A327.28
liver, neonate N25.CNhs11198.1368-26H128.70
liver, neonate N30.CNhs11106.1382-42D136.18
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F47.04
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E56.98
pancreas, embryo E17.CNhs10599.1558-45G314.17
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G916.28
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F810.14
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I116.32
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C65.90
stomach, neonate N03.CNhs11193.1340-24B86.20
stomach, neonate N07.CNhs11210.718-18A95.21
stomach, neonate N25.CNhs11104.1355-25E48.90
stomach, neonate N30.CNhs11134.1386-42I161.96
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E55.86
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell4.59e-079
epithelial cell of alimentary canal4.59e-079

Uber anatomy
Ontology termp-valuen
intestine4.12e-2231
gastrointestinal system1.01e-1847
digestive tract diverticulum1.12e-1323
sac1.12e-1323
endoderm-derived structure6.16e-13118
endoderm6.16e-13118
presumptive endoderm6.16e-13118
liver6.17e-1322
epithelial sac6.17e-1322
digestive gland6.17e-1322
epithelium of foregut-midgut junction6.17e-1322
anatomical boundary6.17e-1322
hepatobiliary system6.17e-1322
foregut-midgut junction6.17e-1322
hepatic diverticulum6.17e-1322
liver primordium6.17e-1322
septum transversum6.17e-1322
liver bud6.17e-1322
digestive system1.45e-12116
digestive tract1.45e-12116
primitive gut1.45e-12116
mucosa7.83e-1215
subdivision of digestive tract1.78e-11114
abdomen element9.02e-1149
abdominal segment element9.02e-1149
abdominal segment of trunk9.02e-1149
abdomen9.02e-1149
exocrine gland2.19e-1025
exocrine system2.19e-1025
intestinal mucosa2.53e-1013
wall of intestine2.53e-1013
gastrointestinal system mucosa2.53e-1013
trunk region element1.01e-0879
organ component layer1.14e-0724
epithelium of mucosa4.59e-079
gastrointestinal system epithelium4.59e-079
intestinal epithelium4.59e-079
mesenchyme4.80e-0761
entire embryonic mesenchyme4.80e-0761
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