FFCP PHASE1:Mm9::chr3:144695921..144695933,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=23844 | |EntrezGene=23844 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=274 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D7Z6 | |UniProt=Q9D7Z6 | ||
|association_with_transcript=-181bp_to_ENSMUST00000029919,NM_017474,uc008rqf.2_5end | |association_with_transcript=-181bp_to_ENSMUST00000029919,NM_017474,uc008rqf.2_5end | ||
|cluster_id=chr3:144695921..144695933,- | |||
|description=CAGE_peak_2_at_Clca3_5end | |description=CAGE_peak_2_at_Clca3_5end | ||
|id=chr3:144695921..144695933,- | |id=chr3:144695921..144695933,- | ||
|ontology_enrichment_celltype=CL:0000239!8.76e-11!6;CL:0000677!8.76e-11!6;CL:0000212!8.76e-11!6;CL:0000584!8.76e-11!6;CL:0000075!4.04e-09!7;CL:0002563!4.24e-09!9;CL:0002251!4.24e-09!9 | |ontology_enrichment_celltype=CL:0000239!8.76e-11!6;CL:0000677!8.76e-11!6;CL:0000212!8.76e-11!6;CL:0000584!8.76e-11!6;CL:0000075!4.04e-09!7;CL:0002563!4.24e-09!9;CL:0002251!4.24e-09!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.92e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!9.31e-31!59;UBERON:0000160!1.60e-28!43;UBERON:0000344!1.23e-19!15;UBERON:0001242!4.16e-16!13;UBERON:0000060!4.16e-16!13;UBERON:0001262!4.16e-16!13;UBERON:0004786!4.16e-16!13;UBERON:0001007!8.87e-15!128;UBERON:0001555!8.87e-15!128;UBERON:0007026!8.87e-15!128;UBERON:0004119!2.14e-14!130;UBERON:0000925!2.14e-14!130;UBERON:0006595!2.14e-14!130;UBERON:0004921!6.73e-13!126;UBERON:0004185!6.73e-13!126;UBERON:0004923!5.48e-11!24;UBERON:0003350!4.24e-09!9;UBERON:0004808!4.24e-09!9;UBERON:0001277!4.24e-09!9;UBERON:0000331!2.76e-07!3;UBERON:0002116!2.76e-07!3;UBERON:0001204!2.76e-07!3;UBERON:0001168!2.76e-07!3;UBERON:0000485!3.12e-07!11 | |ontology_enrichment_uberon=UBERON:0005409!9.31e-31!59;UBERON:0000160!1.60e-28!43;UBERON:0000344!1.23e-19!15;UBERON:0001242!4.16e-16!13;UBERON:0000060!4.16e-16!13;UBERON:0001262!4.16e-16!13;UBERON:0004786!4.16e-16!13;UBERON:0001007!8.87e-15!128;UBERON:0001555!8.87e-15!128;UBERON:0007026!8.87e-15!128;UBERON:0004119!2.14e-14!130;UBERON:0000925!2.14e-14!130;UBERON:0006595!2.14e-14!130;UBERON:0004921!6.73e-13!126;UBERON:0004185!6.73e-13!126;UBERON:0004923!5.48e-11!24;UBERON:0003350!4.24e-09!9;UBERON:0004808!4.24e-09!9;UBERON:0001277!4.24e-09!9;UBERON:0000331!2.76e-07!3;UBERON:0002116!2.76e-07!3;UBERON:0001204!2.76e-07!3;UBERON:0001168!2.76e-07!3;UBERON:0000485!3.12e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.66e-43,31;UBERON:0005409,6.24e-35,47;UBERON:0000344,7.15e-15,15;UBERON:0001007,2.08e-13,116;UBERON:0001555,2.08e-13,116;UBERON:0007026,2.08e-13,116;UBERON:0004119,4.40e-13,118;UBERON:0000925,4.40e-13,118;UBERON:0006595,4.40e-13,118;UBERON:0002108,1.70e-12,4;UBERON:0004921,3.46e-11,114;UBERON:0001242,1.44e-10,13;UBERON:0001262,1.44e-10,13;UBERON:0004786,1.44e-10,13;UBERON:0000331,4.44e-10,3;UBERON:0002116,4.44e-10,3;UBERON:0001204,4.44e-10,3;UBERON:0001168,4.44e-10,3;UBERON:0004923,1.20e-08,24;UBERON:0001962,5.86e-07,2;UBERON:0001961,5.86e-07,2;UBERON:0001744,5.86e-07,2 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,0.60492842261366,1.50268718983904,13.766100296775,13.0823078733494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.83962871687693,6.42345986988076,2.29692785646008,4.73838195774982,4.09395342103189,16.3420140732482,9.57714493087737,10.4213340007993,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59963200862735,3.70230793328962,0,0,1.03093969057675,2.21851877085677,3.33567065767305,2.66315876557583,2.84717436926707,3.29397909448022,1.00534083520108,2.18852119245266,1.9496408711912,5.39291645192533,9.07779809473716,7.16908583715722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.324016022465404,0,0.218362563746178,0.134864346384821,0.0826534557253359,1.83229159388821,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46521299413812,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0.697950815278722,0.909998478779072,0.60492842261366,1.50268718983904,13.766100296775,13.0823078733494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.83962871687693,6.42345986988076,2.29692785646008,4.73838195774982,4.09395342103189,16.3420140732482,9.57714493087737,10.4213340007993,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59963200862735,3.70230793328962,0,0,1.03093969057675,2.21851877085677,3.33567065767305,2.66315876557583,2.84717436926707,3.29397909448022,1.00534083520108,2.18852119245266,1.9496408711912,5.39291645192533,9.07779809473716,7.16908583715722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.324016022465404,0,0.218362563746178,0.134864346384821,0.0826534557253359,1.83229159388821,1.29614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46521299413812,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p2@Clca3 | |short_description=p2@Clca3 | ||
}} | }} |
Latest revision as of 18:20, 1 October 2015
Short description: | p2@Clca3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Clca3_5end |
Coexpression cluster: | MCL_coexpression_mm9:274 |
Association with transcript: | -181bp_to_ENSMUST00000029919, NM_017474, uc008rqf.2_5end |
EntrezGene: | Clca3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.92e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.66e-43 | 31 |
gastrointestinal system | 6.24e-35 | 47 |
mucosa | 7.15e-15 | 15 |
digestive system | 2.08e-13 | 116 |
digestive tract | 2.08e-13 | 116 |
primitive gut | 2.08e-13 | 116 |
endoderm-derived structure | 4.40e-13 | 118 |
endoderm | 4.40e-13 | 118 |
presumptive endoderm | 4.40e-13 | 118 |
small intestine | 1.70e-12 | 4 |
subdivision of digestive tract | 3.46e-11 | 114 |
intestinal mucosa | 1.44e-10 | 13 |
wall of intestine | 1.44e-10 | 13 |
gastrointestinal system mucosa | 1.44e-10 | 13 |
ileal mucosa | 4.44e-10 | 3 |
ileum | 4.44e-10 | 3 |
mucosa of small intestine | 4.44e-10 | 3 |
wall of small intestine | 4.44e-10 | 3 |
organ component layer | 1.20e-08 | 24 |
gut-associated lymphoid tissue | 5.86e-07 | 2 |
mucosa-associated lymphoid tissue | 5.86e-07 | 2 |
lymphoid tissue | 5.86e-07 | 2 |