FFCP PHASE1:Mm9::chrX:71550431..71550445,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14567 | |EntrezGene=14567 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P50396 | |UniProt=P50396 | ||
|association_with_transcript=80bp_to_ENSMUST00000146013,NM_010273,uc009tom.2_5end | |association_with_transcript=80bp_to_ENSMUST00000146013,NM_010273,uc009tom.2_5end | ||
|cluster_id=chrX:71550431..71550445,+ | |||
|description=CAGE_peak_5_at_Gdi1_5end | |description=CAGE_peak_5_at_Gdi1_5end | ||
|id=chrX:71550431..71550445,+ | |id=chrX:71550431..71550445,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.06e-15!33;CL:0000047!1.06e-15!33;CL:0000031!1.06e-15!33;CL:0000404!1.06e-15!33;CL:0000117!1.26e-12!23;CL:0000337!1.26e-12!23;CL:0000393!1.87e-12!39;CL:0000211!1.87e-12!39;CL:0002319!2.12e-12!43;CL:0000221!1.17e-11!44;CL:0000133!1.17e-11!44;CL:0000055!1.32e-09!50 | |ontology_enrichment_celltype=CL:0000540!1.06e-15!33;CL:0000047!1.06e-15!33;CL:0000031!1.06e-15!33;CL:0000404!1.06e-15!33;CL:0000117!1.26e-12!23;CL:0000337!1.26e-12!23;CL:0000393!1.87e-12!39;CL:0000211!1.87e-12!39;CL:0002319!2.12e-12!43;CL:0000221!1.17e-11!44;CL:0000133!1.17e-11!44;CL:0000055!1.32e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.22e-27,33;CL:0000047,5.22e-27,33;CL:0000031,5.22e-27,33;CL:0000404,5.22e-27,33;CL:0000117,2.54e-23,23;CL:0000337,2.54e-23,23;CL:0000393,7.66e-22,39;CL:0000211,7.66e-22,39;CL:0002319,3.32e-19,43;CL:0000221,1.27e-18,44;CL:0000133,1.27e-18,44;CL:0002321,2.16e-09,70;CL:0002610,2.55e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.24e-28!75;UBERON:0001016!5.24e-28!75;UBERON:0001017!1.05e-27!73;UBERON:0005743!1.05e-27!73;UBERON:0001049!1.13e-22!52;UBERON:0005068!1.13e-22!52;UBERON:0006241!1.13e-22!52;UBERON:0007135!1.13e-22!52;UBERON:0002346!3.48e-22!71;UBERON:0003075!3.48e-22!71;UBERON:0007284!3.48e-22!71;UBERON:0004121!4.13e-22!102;UBERON:0000924!4.13e-22!102;UBERON:0006601!4.13e-22!102;UBERON:0000955!3.17e-21!50;UBERON:0006238!3.17e-21!50;UBERON:0002616!6.20e-21!49;UBERON:0000033!2.12e-19!63;UBERON:0003080!1.52e-17!40;UBERON:0002780!6.62e-17!39;UBERON:0001890!6.62e-17!39;UBERON:0006240!6.62e-17!39;UBERON:0002020!3.14e-16!34;UBERON:0003056!3.25e-16!49;UBERON:0002791!3.93e-13!29;UBERON:0003528!3.93e-13!29;UBERON:0001893!3.93e-13!29;UBERON:0007811!6.75e-10!86;UBERON:0000153!2.63e-08!94;UBERON:0000956!2.76e-08!21;UBERON:0001869!2.76e-08!21;UBERON:0000203!2.76e-08!21;UBERON:0002619!5.69e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.55e-41,73;UBERON:0001016,8.41e-40,75;UBERON:0000073,6.26e-36,54;UBERON:0001049,2.55e-32,52;UBERON:0005068,2.55e-32,52;UBERON:0006241,2.55e-32,52;UBERON:0007135,2.55e-32,52;UBERON:0002346,7.69e-30,64;UBERON:0003075,7.69e-30,64;UBERON:0007284,7.69e-30,64;UBERON:0004121,3.09e-29,95;UBERON:0000924,3.09e-29,95;UBERON:0006601,3.09e-29,95;UBERON:0002020,1.10e-28,34;UBERON:0010371,5.07e-25,73;UBERON:0002616,1.76e-23,46;UBERON:0000955,7.97e-23,47;UBERON:0006238,7.97e-23,47;UBERON:0003080,4.11e-21,40;UBERON:0003528,4.55e-21,29;UBERON:0002791,4.55e-21,29;UBERON:0001893,4.55e-21,29;UBERON:0002780,9.67e-20,39;UBERON:0001890,9.67e-20,39;UBERON:0006240,9.67e-20,39;UBERON:0010314,5.89e-18,92;UBERON:0003056,4.75e-16,49;UBERON:0002420,1.13e-14,8;UBERON:0007245,1.13e-14,8;UBERON:0010009,1.13e-14,8;UBERON:0010011,1.13e-14,8;UBERON:0000454,1.13e-14,8;UBERON:0003076,7.87e-12,12;UBERON:0003057,7.87e-12,12;UBERON:0002240,3.18e-11,6;UBERON:0005174,3.18e-11,6;UBERON:0001137,3.18e-11,6;UBERON:0002619,7.44e-11,17;UBERON:0000025,4.26e-10,114;UBERON:0000956,6.56e-10,21;UBERON:0001869,6.56e-10,21;UBERON:0000203,6.56e-10,21;UBERON:0011216,9.69e-10,194;UBERON:0000369,1.41e-09,5;UBERON:0002435,1.41e-09,5;UBERON:0000204,1.41e-09,5;UBERON:0010082,1.41e-09,5;UBERON:0001948,1.74e-09,5;UBERON:0002315,1.74e-09,5;UBERON:0004111,6.72e-09,122;UBERON:0002021,2.25e-08,10;UBERON:0000411,2.25e-08,10;UBERON:0001950,2.25e-08,10;UBERON:0002950,2.82e-08,4;UBERON:0001891,2.82e-08,4;UBERON:0009616,2.82e-08,4;UBERON:0010286,2.82e-08,4;UBERON:0004684,2.55e-07,3;UBERON:0002275,2.55e-07,3 | |||
|phase1_expression=0.480446541314382,0.697950815278722,0.454999239389536,0.30246421130683,0,0.16787927191189,0.700837921786577,0.129123323441576,0,0.234064526321993,0,0.0797721589953364,0,0,0,0.809901069559304,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0.0992909512008853,0,0.47997726838022,0.22940928106717,1.14846392823004,0.86152399231815,0.430942465371778,0.380046838912748,0.252030129759931,0,0,0,0,0.288851619751275,0,0.816677425049476,0.418531630736908,0,0,0,0,0,0.629484089877886,0.101376931219515,0,0,0.218025156380447,0.659058548203415,0.58328969722285,0.279972843250725,0,0.167782606057736,0,0,0.257259436035947,0,0,1.82084814773638,1.5869729378161,0.633831403506179,0,0,0.899899717281399,0.988866362566974,0,0,0,0.518448061542388,0.405017814995072,0.210324961351382,3.42781181284564,2.87129103237098,0.979926393719632,1.72521847832825,1.83843757322004,4.40463523997555,3.19218345212969,3.68655679814984,2.2420668914133,2.65314166446988,3.12548022334056,3.35019598801657,2.8138130501584,2.13917546887534,2.06240009831567,1.99320353118744,1.67759501242771,0.302904773332736,0.604572480854284,0.289864488701678,0,0,0.539703191637817,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0.346970653532272,0,0.461230994512117,0.753613202763113,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.662524555381181,0.969750506270444,1.86391761218122,2.04946557908083,0.83778682725382,0,0,0,0.127070227073065,2.24685959107234,1.37250180845588,3.01570445070875,1.56441888173049,2.04572365864264,3.32460871295296,2.59586020908412,0.101839363850316,0.248813941220186,0,0,0.780722657776222,0,0.180062129805349,0.60281927134286,0.476255494059295,0.2562274405697,0.281105173679186,0.776110112217047,0,0.189106080167819,0.351902248327898,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,2.10289948564127,1.64647379806855,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0,0.796565093017469,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0.592905254174298,0.500535317148282,0.393117990226406,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0,0.433947175744535,1.50791283939272,0.54390568381871,0,0,3.69266356971921,3.04750385139728,0,0.252470927204373,1.57754109708128,1.56175497718655,1.07711698866399,0.238968797952552,1.11399337041197,0.566153061577665,0.404810701674894,1.75353514746787,2.76701444562566,0.642642632843614,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0.720244376125241,0.646793418913773,0.428674070063185,0.886701168211368,0.891844088010353,0.493647061806363,0.913394847343798,0,0,0.220528398054962,0.16488625294148,0,0.241251699712623,0,0,0.291480836629851,2.96680483216816,0.341741761595705,0.206386867963223,0.185194527369712,0.753473828018764,0.27338845544205,0,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0.165306911450672,0.523511883968059,0.129614973291793,0.621339313086926,0,0.299033092087958,0,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0,0,0,0.632022241256357,0,0.205421914329655,0,0,0.39736270956253,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0.183151624267265,0.643105137237198,0,3.3885110557024,2.30162618253588,3.43737308063638,2.23409137046794,0,1.5107877947794,0.675022500231806,0.900642406448441,2.26571204492102,1.03552062350364,0.415149390336707,0,0.341467211508268,0.972426868273176,0.628839487883947,1.2869045591501,0.44449345560323,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.565879024158229,0.561849044819294,0.448176066834085,0.229741875822453,0,0.695305955669133,0.77163688185482,0.412085900803307,0.588795680537589,1.02860775715625,0.177475806159338,0.715308569841963,0.436039249896986,0.470546902076653,0.338458431566706,0.365855945745545,0,0.543216455383447,0,0.711810108745045,0.29551344712669,0.818462086339379,0.619747364743864,1.15743966588685,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.661774257358546,0 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|phase1_expression=0.480446541314382,0.697950815278722,0.454999239389536,0.30246421130683,0,0.16787927191189,0.700837921786577,0.129123323441576,0,0.234064526321993,0,0.0797721589953364,0,0,0,0.809901069559304,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0.0992909512008853,0,0.47997726838022,0.22940928106717,1.14846392823004,0.86152399231815,0.430942465371778,0.380046838912748,0.252030129759931,0,0,0,0,0.288851619751275,0,0.816677425049476,0.418531630736908,0,0,0,0,0,0.629484089877886,0.101376931219515,0,0,0.218025156380447,0.659058548203415,0.58328969722285,0.279972843250725,0,0.167782606057736,0,0,0.257259436035947,0,0,1.82084814773638,1.5869729378161,0.633831403506179,0,0,0.899899717281399,0.988866362566974,0,0,0,0.518448061542388,0.405017814995072,0.210324961351382,3.42781181284564,2.87129103237098,0.979926393719632,1.72521847832825,1.83843757322004,4.40463523997555,3.19218345212969,3.68655679814984,2.2420668914133,2.65314166446988,3.12548022334056,3.35019598801657,2.8138130501584,2.13917546887534,2.06240009831567,1.99320353118744,1.67759501242771,0.302904773332736,0.604572480854284,0.289864488701678,0,0,0.539703191637817,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0.346970653532272,0,0.461230994512117,0.753613202763113,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.662524555381181,0.969750506270444,1.86391761218122,2.04946557908083,0.83778682725382,0,0,0,0.127070227073065,2.24685959107234,1.37250180845588,3.01570445070875,1.56441888173049,2.04572365864264,3.32460871295296,2.59586020908412,0.101839363850316,0.248813941220186,0,0,0.780722657776222,0,0.180062129805349,0.60281927134286,0.476255494059295,0.2562274405697,0.281105173679186,0.776110112217047,0,0.189106080167819,0.351902248327898,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,2.10289948564127,1.64647379806855,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0,0.796565093017469,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0.592905254174298,0.500535317148282,0.393117990226406,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0,0.433947175744535,1.50791283939272,0.54390568381871,0,0,3.69266356971921,3.04750385139728,0,0.252470927204373,1.57754109708128,1.56175497718655,1.07711698866399,0.238968797952552,1.11399337041197,0.566153061577665,0.404810701674894,1.75353514746787,2.76701444562566,0.642642632843614,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0.720244376125241,0.646793418913773,0.428674070063185,0.886701168211368,0.891844088010353,0.493647061806363,0.913394847343798,0,0,0.220528398054962,0.16488625294148,0,0.241251699712623,0,0,0.291480836629851,2.96680483216816,0.341741761595705,0.206386867963223,0.185194527369712,0.753473828018764,0.27338845544205,0,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0.165306911450672,0.523511883968059,0.129614973291793,0.621339313086926,0,0.299033092087958,0,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0,0,0,0.632022241256357,0,0.205421914329655,0,0,0.39736270956253,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0.183151624267265,0.643105137237198,0,3.3885110557024,2.30162618253588,3.43737308063638,2.23409137046794,0,1.5107877947794,0.675022500231806,0.900642406448441,2.26571204492102,1.03552062350364,0.415149390336707,0,0.341467211508268,0.972426868273176,0.628839487883947,1.2869045591501,0.44449345560323,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.565879024158229,0.561849044819294,0.448176066834085,0.229741875822453,0,0.695305955669133,0.77163688185482,0.412085900803307,0.588795680537589,1.02860775715625,0.177475806159338,0.715308569841963,0.436039249896986,0.470546902076653,0.338458431566706,0.365855945745545,0,0.543216455383447,0,0.711810108745045,0.29551344712669,0.818462086339379,0.619747364743864,1.15743966588685,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.661774257358546,0 | ||
|short_description=p5@Gdi1 | |short_description=p5@Gdi1 | ||
}} | }} |
Latest revision as of 00:18, 2 October 2015
Short description: | p5@Gdi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gdi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 80bp_to_ENSMUST00000146013, NM_010273, uc009tom.2_5end |
EntrezGene: | Gdi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.22e-27 | 33 |
neuronal stem cell | 5.22e-27 | 33 |
neuroblast | 5.22e-27 | 33 |
electrically signaling cell | 5.22e-27 | 33 |
CNS neuron (sensu Vertebrata) | 2.54e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.54e-23 | 23 |
electrically responsive cell | 7.66e-22 | 39 |
electrically active cell | 7.66e-22 | 39 |
neural cell | 3.32e-19 | 43 |
ectodermal cell | 1.27e-18 | 44 |
neurectodermal cell | 1.27e-18 | 44 |
embryonic cell | 2.16e-09 | 70 |
raphe nuclei neuron | 2.55e-07 | 3 |