FFCP PHASE1:Mm9::chr9:44481268..44481271,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=58866 | |EntrezGene=58866 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JLT2 | |UniProt=Q9JLT2 | ||
|association_with_transcript=-44bp_to_ENSMUST00000034609_5end | |association_with_transcript=-44bp_to_ENSMUST00000034609_5end | ||
|cluster_id=chr9:44481268..44481271,+ | |||
|description=CAGE_peak_2_at_Treh_5end | |description=CAGE_peak_2_at_Treh_5end | ||
|id=chr9:44481268..44481271,+ | |id=chr9:44481268..44481271,+ | ||
|ontology_enrichment_celltype=CL:0000473!1.70e-09!3;CL:0000627!1.70e-09!3;CL:0000682!1.70e-09!3;CL:0000239!6.00e-09!6;CL:0000677!6.00e-09!6;CL:0000212!6.00e-09!6;CL:0000584!6.00e-09!6;CL:0002563!1.45e-08!9;CL:0002251!1.45e-08!9;CL:0000075!1.16e-07!7 | |ontology_enrichment_celltype=CL:0000473!1.70e-09!3;CL:0000627!1.70e-09!3;CL:0000682!1.70e-09!3;CL:0000239!6.00e-09!6;CL:0000677!6.00e-09!6;CL:0000212!6.00e-09!6;CL:0000584!6.00e-09!6;CL:0002563!1.45e-08!9;CL:0002251!1.45e-08!9;CL:0000075!1.16e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.03e-13,3;CL:0000239,6.25e-13,6;CL:0000677,6.25e-13,6;CL:0000584,6.25e-13,6;CL:0000075,4.21e-11,7;CL:0002563,1.17e-08,9;CL:0002251,1.17e-08,9;CL:0000066,3.55e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.81e-19!43;UBERON:0000344!1.00e-18!15;UBERON:0005409!1.44e-14!59;UBERON:0001242!4.38e-14!13;UBERON:0000060!4.38e-14!13;UBERON:0001262!4.38e-14!13;UBERON:0004786!4.38e-14!13;UBERON:0004923!2.39e-13!24;UBERON:0003350!1.45e-08!9;UBERON:0004808!1.45e-08!9;UBERON:0001277!1.45e-08!9;UBERON:0000485!6.13e-07!11;UBERON:0001962!6.94e-07!2;UBERON:0001961!6.94e-07!2;UBERON:0001744!6.94e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.22e-26,31;UBERON:0000344,1.67e-18,15;UBERON:0005409,8.27e-17,47;UBERON:0004923,4.62e-14,24;UBERON:0001242,1.71e-12,13;UBERON:0001262,1.71e-12,13;UBERON:0004786,1.71e-12,13;UBERON:0001962,1.58e-09,2;UBERON:0001961,1.58e-09,2;UBERON:0001744,1.58e-09,2;UBERON:0003350,1.17e-08,9;UBERON:0004808,1.17e-08,9;UBERON:0001277,1.17e-08,9;UBERON:0001007,1.93e-07,116;UBERON:0001555,1.93e-07,116;UBERON:0007026,1.93e-07,116;UBERON:0004119,2.87e-07,118;UBERON:0000925,2.87e-07,118;UBERON:0006595,2.87e-07,118;UBERON:0000485,4.27e-07,11 | |||
|phase1_expression=0,4.88565570695105,5.0049916332849,9.0739263392049,13.023288978605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,1.60586496747019,1.14846392823004,2.58457197695445,1.07735616342945,0.570070258369122,1.00812051903972,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,1.48316980640624,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91256348951394,5.28901133327089,0,0,0,0,0,0,3.79623249235609,0,1.00534083520108,0.198956472041151,0.38992817423824,4.49409704327111,1.51296634912286,5.17767310461355,0,0,0,0,0,0.0701358198903186,0,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,4.88565570695105,5.0049916332849,9.0739263392049,13.023288978605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,1.60586496747019,1.14846392823004,2.58457197695445,1.07735616342945,0.570070258369122,1.00812051903972,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,1.48316980640624,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91256348951394,5.28901133327089,0,0,0,0,0,0,3.79623249235609,0,1.00534083520108,0.198956472041151,0.38992817423824,4.49409704327111,1.51296634912286,5.17767310461355,0,0,0,0,0,0.0701358198903186,0,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Treh | |short_description=p2@Treh | ||
}} | }} |
Latest revision as of 17:11, 26 September 2015
Short description: | p2@Treh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Treh_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -44bp_to_ENSMUST00000034609_5end |
EntrezGene: | Treh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.03e-13 | 3 |
brush border epithelial cell | 6.25e-13 | 6 |
gut absorptive cell | 6.25e-13 | 6 |
enterocyte | 6.25e-13 | 6 |
columnar/cuboidal epithelial cell | 4.21e-11 | 7 |
intestinal epithelial cell | 1.17e-08 | 9 |
epithelial cell of alimentary canal | 1.17e-08 | 9 |
epithelial cell | 3.55e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.22e-26 | 31 |
mucosa | 1.67e-18 | 15 |
gastrointestinal system | 8.27e-17 | 47 |
organ component layer | 4.62e-14 | 24 |
intestinal mucosa | 1.71e-12 | 13 |
wall of intestine | 1.71e-12 | 13 |
gastrointestinal system mucosa | 1.71e-12 | 13 |
gut-associated lymphoid tissue | 1.58e-09 | 2 |
mucosa-associated lymphoid tissue | 1.58e-09 | 2 |
lymphoid tissue | 1.58e-09 | 2 |
epithelium of mucosa | 1.17e-08 | 9 |
gastrointestinal system epithelium | 1.17e-08 | 9 |
intestinal epithelium | 1.17e-08 | 9 |
digestive system | 1.93e-07 | 116 |
digestive tract | 1.93e-07 | 116 |
primitive gut | 1.93e-07 | 116 |
endoderm-derived structure | 2.87e-07 | 118 |
endoderm | 2.87e-07 | 118 |
presumptive endoderm | 2.87e-07 | 118 |
simple columnar epithelium | 4.27e-07 | 11 |