FFCP PHASE1:Mm9::chr9:107558460..107558474,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=221 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:107558460..107558474,- | |||
|description=CAGE_peak_at_chr9:107558460..107558474,- | |description=CAGE_peak_at_chr9:107558460..107558474,- | ||
|id=chr9:107558460..107558474,- | |id=chr9:107558460..107558474,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.48e-19,5;CL:0000878,7.26e-12,2;CL:0000129,7.26e-12,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.15e-16!22;UBERON:0007499!2.15e-16!22;UBERON:0006925!2.15e-16!22;UBERON:0009497!2.15e-16!22;UBERON:0000015!2.15e-16!22;UBERON:0002423!2.15e-16!22;UBERON:0006235!2.15e-16!22;UBERON:0008835!2.15e-16!22;UBERON:0003894!2.15e-16!22;UBERON:0004161!2.15e-16!22;UBERON:0008836!2.15e-16!22;UBERON:0002365!1.87e-15!25;UBERON:0002330!1.87e-15!25;UBERON:0009854!2.10e-15!23;UBERON:0009856!2.10e-15!23;UBERON:0000025!5.40e-08!114;UBERON:0003914!1.74e-07!47;UBERON:0005177!2.22e-07!85;UBERON:0005172!8.67e-07!49;UBERON:0005173!8.67e-07!49;UBERON:0002417!8.67e-07!49;UBERON:0000916!8.67e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.98e-29,22;UBERON:0007499,1.98e-29,22;UBERON:0006925,1.98e-29,22;UBERON:0009497,1.98e-29,22;UBERON:0000015,1.98e-29,22;UBERON:0002423,1.98e-29,22;UBERON:0006235,1.98e-29,22;UBERON:0008835,1.98e-29,22;UBERON:0003894,1.98e-29,22;UBERON:0004161,1.98e-29,22;UBERON:0008836,1.98e-29,22;UBERON:0009854,4.29e-28,23;UBERON:0009856,4.29e-28,23;UBERON:0002365,9.65e-26,25;UBERON:0002330,9.65e-26,25;UBERON:0005256,1.10e-13,45;UBERON:0003914,4.83e-13,47;UBERON:0005172,1.88e-12,49;UBERON:0005173,1.88e-12,49;UBERON:0002417,1.88e-12,49;UBERON:0000916,1.88e-12,49;UBERON:0003929,6.22e-11,55;UBERON:0002368,6.74e-10,60;UBERON:0003104,1.04e-09,61;UBERON:0009142,1.04e-09,61;UBERON:0002530,5.08e-09,65;UBERON:0000490,7.34e-09,66;UBERON:0009569,7.34e-09,66;UBERON:0005911,2.08e-08,69;UBERON:0000949,5.39e-08,72;UBERON:0005177,3.77e-07,79;UBERON:0001041,4.85e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,3.84218305321555,0.103689612308478,0,0.420649922702764,0.285650984403804,0.662605622854841,0,0,0,0,0.127687338085188,0.153606533256243,0,0.182975287204819,0,0.558365998002762,0.56276261003168,0.763991238884051,0.589257170947335,0.142371680799103,0.186399445825301,0,0,0,0.860423876981386,14.2793980078628,9.71465744948071,12.3457519315057,12.5447528387254,2.24711072210803,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0.304465478312141,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,1.25668024088073,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0.324482526135515,0,0,0,0.420883711772948,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0.134206418760372,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0.156998727841375,0.123397163921801,3.26097889795864,0,0,0.449724224769707,0.202860121388503,0,0.25462585178142,0.575392274901621,2.2698931748505,1.09824565275233,12.9391385874619,0.372140947668503,1.24815069245824,0.505157755894224,1.97337154874103,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0.242780636154981,0,0.565815239267694,0,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.237270036248348,0,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,3.84218305321555,0.103689612308478,0,0.420649922702764,0.285650984403804,0.662605622854841,0,0,0,0,0.127687338085188,0.153606533256243,0,0.182975287204819,0,0.558365998002762,0.56276261003168,0.763991238884051,0.589257170947335,0.142371680799103,0.186399445825301,0,0,0,0.860423876981386,14.2793980078628,9.71465744948071,12.3457519315057,12.5447528387254,2.24711072210803,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0.304465478312141,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,1.25668024088073,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0.324482526135515,0,0,0,0.420883711772948,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0.134206418760372,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0.156998727841375,0.123397163921801,3.26097889795864,0,0,0.449724224769707,0.202860121388503,0,0.25462585178142,0.575392274901621,2.2698931748505,1.09824565275233,12.9391385874619,0.372140947668503,1.24815069245824,0.505157755894224,1.97337154874103,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0.242780636154981,0,0.565815239267694,0,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.237270036248348,0,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr9:107558460..107558474,- | |short_description=p@chr9:107558460..107558474,- | ||
}} | }} |
Latest revision as of 13:02, 4 August 2015
Short description: | p@chr9:107558460..107558474, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:107558460..107558474, - |
Coexpression cluster: | MCL_coexpression_mm9:221 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.48e-19 | 5 |
central nervous system macrophage | 7.26e-12 | 2 |
microglial cell | 7.26e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 1.98e-29 | 22 |
epithelial sac | 1.98e-29 | 22 |
digestive gland | 1.98e-29 | 22 |
epithelium of foregut-midgut junction | 1.98e-29 | 22 |
anatomical boundary | 1.98e-29 | 22 |
hepatobiliary system | 1.98e-29 | 22 |
foregut-midgut junction | 1.98e-29 | 22 |
hepatic diverticulum | 1.98e-29 | 22 |
liver primordium | 1.98e-29 | 22 |
septum transversum | 1.98e-29 | 22 |
liver bud | 1.98e-29 | 22 |
digestive tract diverticulum | 4.29e-28 | 23 |
sac | 4.29e-28 | 23 |
exocrine gland | 9.65e-26 | 25 |
exocrine system | 9.65e-26 | 25 |
trunk mesenchyme | 1.10e-13 | 45 |
epithelial tube | 4.83e-13 | 47 |
abdomen element | 1.88e-12 | 49 |
abdominal segment element | 1.88e-12 | 49 |
abdominal segment of trunk | 1.88e-12 | 49 |
abdomen | 1.88e-12 | 49 |
gut epithelium | 6.22e-11 | 55 |
endocrine gland | 6.74e-10 | 60 |
mesenchyme | 1.04e-09 | 61 |
entire embryonic mesenchyme | 1.04e-09 | 61 |
gland | 5.08e-09 | 65 |
unilaminar epithelium | 7.34e-09 | 66 |
subdivision of trunk | 7.34e-09 | 66 |
endo-epithelium | 2.08e-08 | 69 |
endocrine system | 5.39e-08 | 72 |
trunk region element | 3.77e-07 | 79 |
foregut | 4.85e-07 | 80 |