FFCP PHASE1:Mm9::chr1:141398311..141398323,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14060 | |EntrezGene=14060 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=B1AY02,Q3UER0 | |UniProt=B1AY02,Q3UER0 | ||
|association_with_transcript=27bp_to_ENSMUST00000027615,ENSMUST00000139080,NM_031164,uc007cwk.2_5end | |association_with_transcript=27bp_to_ENSMUST00000027615,ENSMUST00000139080,NM_031164,uc007cwk.2_5end | ||
|cluster_id=chr1:141398311..141398323,+ | |||
|description=CAGE_peak_2_at_F13b_5end | |description=CAGE_peak_2_at_F13b_5end | ||
|id=chr1:141398311..141398323,+ | |id=chr1:141398311..141398323,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.01e-08,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.07e-21!22;UBERON:0007499!1.07e-21!22;UBERON:0006925!1.07e-21!22;UBERON:0009497!1.07e-21!22;UBERON:0000015!1.07e-21!22;UBERON:0002423!1.07e-21!22;UBERON:0006235!1.07e-21!22;UBERON:0008835!1.07e-21!22;UBERON:0003894!1.07e-21!22;UBERON:0004161!1.07e-21!22;UBERON:0008836!1.07e-21!22;UBERON:0009854!1.98e-20!23;UBERON:0009856!1.98e-20!23;UBERON:0002365!3.34e-18!25;UBERON:0002330!3.34e-18!25;UBERON:0005172!7.82e-17!49;UBERON:0005173!7.82e-17!49;UBERON:0002417!7.82e-17!49;UBERON:0000916!7.82e-17!49;UBERON:0009569!1.01e-10!66;UBERON:0005256!1.84e-10!47;UBERON:0005177!4.74e-08!85;UBERON:0003914!6.73e-08!47;UBERON:0002368!3.36e-07!60;UBERON:0005057!8.67e-07!51 | |ontology_enrichment_uberon=UBERON:0002107!1.07e-21!22;UBERON:0007499!1.07e-21!22;UBERON:0006925!1.07e-21!22;UBERON:0009497!1.07e-21!22;UBERON:0000015!1.07e-21!22;UBERON:0002423!1.07e-21!22;UBERON:0006235!1.07e-21!22;UBERON:0008835!1.07e-21!22;UBERON:0003894!1.07e-21!22;UBERON:0004161!1.07e-21!22;UBERON:0008836!1.07e-21!22;UBERON:0009854!1.98e-20!23;UBERON:0009856!1.98e-20!23;UBERON:0002365!3.34e-18!25;UBERON:0002330!3.34e-18!25;UBERON:0005172!7.82e-17!49;UBERON:0005173!7.82e-17!49;UBERON:0002417!7.82e-17!49;UBERON:0000916!7.82e-17!49;UBERON:0009569!1.01e-10!66;UBERON:0005256!1.84e-10!47;UBERON:0005177!4.74e-08!85;UBERON:0003914!6.73e-08!47;UBERON:0002368!3.36e-07!60;UBERON:0005057!8.67e-07!51 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.26e-33,22;UBERON:0007499,1.26e-33,22;UBERON:0006925,1.26e-33,22;UBERON:0009497,1.26e-33,22;UBERON:0000015,1.26e-33,22;UBERON:0002423,1.26e-33,22;UBERON:0006235,1.26e-33,22;UBERON:0008835,1.26e-33,22;UBERON:0003894,1.26e-33,22;UBERON:0004161,1.26e-33,22;UBERON:0008836,1.26e-33,22;UBERON:0009854,6.19e-32,23;UBERON:0009856,6.19e-32,23;UBERON:0002365,5.84e-29,25;UBERON:0002330,5.84e-29,25;UBERON:0005172,5.24e-19,49;UBERON:0005173,5.24e-19,49;UBERON:0002417,5.24e-19,49;UBERON:0000916,5.24e-19,49;UBERON:0003104,4.51e-14,61;UBERON:0009142,4.51e-14,61;UBERON:0005256,8.33e-14,45;UBERON:0003914,5.26e-13,47;UBERON:0009569,1.49e-12,66;UBERON:0003929,2.13e-10,55;UBERON:0005177,1.60e-09,79;UBERON:0002368,3.95e-09,60;UBERON:0002530,4.60e-08,65;UBERON:0000490,7.17e-08,66;UBERON:0002100,1.16e-07,90;UBERON:0005911,2.51e-07,69;UBERON:0001041,2.99e-07,80;UBERON:0000949,7.85e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8356834483113,19.7191686775248,30.2233787317178,44.1847963864415,53.7632264516803,9.40977614882737,0,0,0,0,0,0,0,0,0,0,15.8715592809493,0,0,0,0,0.230615497256059,0.60289056221049,0.587943535678524,0.125666591329675,0.988779870937496,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0.350679099451593,7.27220176928959,13.1373031701846,11.303908404579,11.8461277364928,35.5743152504579,0,0.393117990226406,2.24862112384854,2.23146133527353,5.06472035480075,7.38414970166117,16.1109836972454,26.4280419643308,31.5745625166294,63.258010872036,50.6111688829165,38.0685961199764,30.5620442316005,42.1583921776494,52.1039003072437,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,1.07891477107857,4.29797969771747,0,0,0,0,0,0,0,0,0,0,0.651021924219751,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0.419226325255965,0.183843508450014,0.888986911206461,1.03017528619447,1.60459604795908,1.51618327058278,0.760437899670719,1.32038438970253,0.561849044819294,1.15245274328765,1.14870937911227,1.42888107384922,0.347652977834566,1.15745532278223,0.824171801606613,1.76638704161277,0,0.354951612318675,0.953744759789284,1.45346416632329,1.41164070622996,1.18460451048347,1.46342378298218,2.10455769150274,0.679020569229309,0.561142271657738,1.06771516311757,0.788035859004508,1.22769312950907,0.619747364743864,0.964533054905707,0,1.87145286756327,1.93383948643468,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8356834483113,19.7191686775248,30.2233787317178,44.1847963864415,53.7632264516803,9.40977614882737,0,0,0,0,0,0,0,0,0,0,15.8715592809493,0,0,0,0,0.230615497256059,0.60289056221049,0.587943535678524,0.125666591329675,0.988779870937496,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0.350679099451593,7.27220176928959,13.1373031701846,11.303908404579,11.8461277364928,35.5743152504579,0,0.393117990226406,2.24862112384854,2.23146133527353,5.06472035480075,7.38414970166117,16.1109836972454,26.4280419643308,31.5745625166294,63.258010872036,50.6111688829165,38.0685961199764,30.5620442316005,42.1583921776494,52.1039003072437,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,1.07891477107857,4.29797969771747,0,0,0,0,0,0,0,0,0,0,0.651021924219751,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0.419226325255965,0.183843508450014,0.888986911206461,1.03017528619447,1.60459604795908,1.51618327058278,0.760437899670719,1.32038438970253,0.561849044819294,1.15245274328765,1.14870937911227,1.42888107384922,0.347652977834566,1.15745532278223,0.824171801606613,1.76638704161277,0,0.354951612318675,0.953744759789284,1.45346416632329,1.41164070622996,1.18460451048347,1.46342378298218,2.10455769150274,0.679020569229309,0.561142271657738,1.06771516311757,0.788035859004508,1.22769312950907,0.619747364743864,0.964533054905707,0,1.87145286756327,1.93383948643468,0,0.220591419119515,0 | ||
|short_description=p2@F13b | |short_description=p2@F13b | ||
}} | }} |
Latest revision as of 12:12, 26 September 2015
Short description: | p2@F13b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_F13b_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 27bp_to_ENSMUST00000027615, ENSMUST00000139080, NM_031164, uc007cwk.2_5end |
EntrezGene: | F13b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 1.26e-33 | 22 |
epithelial sac | 1.26e-33 | 22 |
digestive gland | 1.26e-33 | 22 |
epithelium of foregut-midgut junction | 1.26e-33 | 22 |
anatomical boundary | 1.26e-33 | 22 |
hepatobiliary system | 1.26e-33 | 22 |
foregut-midgut junction | 1.26e-33 | 22 |
hepatic diverticulum | 1.26e-33 | 22 |
liver primordium | 1.26e-33 | 22 |
septum transversum | 1.26e-33 | 22 |
liver bud | 1.26e-33 | 22 |
digestive tract diverticulum | 6.19e-32 | 23 |
sac | 6.19e-32 | 23 |
exocrine gland | 5.84e-29 | 25 |
exocrine system | 5.84e-29 | 25 |
abdomen element | 5.24e-19 | 49 |
abdominal segment element | 5.24e-19 | 49 |
abdominal segment of trunk | 5.24e-19 | 49 |
abdomen | 5.24e-19 | 49 |
mesenchyme | 4.51e-14 | 61 |
entire embryonic mesenchyme | 4.51e-14 | 61 |
trunk mesenchyme | 8.33e-14 | 45 |
epithelial tube | 5.26e-13 | 47 |
subdivision of trunk | 1.49e-12 | 66 |
gut epithelium | 2.13e-10 | 55 |
trunk region element | 1.60e-09 | 79 |
endocrine gland | 3.95e-09 | 60 |
gland | 4.60e-08 | 65 |
unilaminar epithelium | 7.17e-08 | 66 |
trunk | 1.16e-07 | 90 |
endo-epithelium | 2.51e-07 | 69 |
foregut | 2.99e-07 | 80 |
endocrine system | 7.85e-07 | 72 |