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FFCP PHASE1:Mm9::chr8:116729474..116729485,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=270097
|EntrezGene=270097
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-26bp_to_ENSMUST00000142591_5end
|association_with_transcript=-26bp_to_ENSMUST00000142591_5end
|cluster_id=chr8:116729474..116729485,+
|description=CAGE_peak_2_at_Vat1l_5end
|description=CAGE_peak_2_at_Vat1l_5end
|id=chr8:116729474..116729485,+
|id=chr8:116729474..116729485,+
|ontology_enrichment_celltype=CL:0002319!1.87e-19!43;CL:0000540!6.89e-19!33;CL:0000047!6.89e-19!33;CL:0000031!6.89e-19!33;CL:0000404!6.89e-19!33;CL:0000221!1.23e-18!44;CL:0000133!1.23e-18!44;CL:0000117!1.67e-16!23;CL:0000337!1.67e-16!23;CL:0000055!1.77e-14!50;CL:0000393!7.02e-14!39;CL:0000211!7.02e-14!39
|ontology_enrichment_celltype=CL:0002319!1.87e-19!43;CL:0000540!6.89e-19!33;CL:0000047!6.89e-19!33;CL:0000031!6.89e-19!33;CL:0000404!6.89e-19!33;CL:0000221!1.23e-18!44;CL:0000133!1.23e-18!44;CL:0000117!1.67e-16!23;CL:0000337!1.67e-16!23;CL:0000055!1.77e-14!50;CL:0000393!7.02e-14!39;CL:0000211!7.02e-14!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.24e-24,23;CL:0000337,2.24e-24,23;CL:0000540,1.39e-17,33;CL:0000047,1.39e-17,33;CL:0000031,1.39e-17,33;CL:0000404,1.39e-17,33;CL:0002319,1.56e-15,43;CL:0000221,4.56e-15,44;CL:0000133,4.56e-15,44;CL:0000393,3.49e-14,39;CL:0000211,3.49e-14,39;CL:0002610,3.85e-08,3;CL:0002614,6.16e-08,3;CL:0002321,1.08e-07,70;CL:0002612,2.80e-07,3;CL:0000120,6.68e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.66e-39!75;UBERON:0001016!3.66e-39!75;UBERON:0001017!4.23e-38!73;UBERON:0005743!4.23e-38!73;UBERON:0004121!2.14e-35!102;UBERON:0000924!2.14e-35!102;UBERON:0006601!2.14e-35!102;UBERON:0002346!1.01e-31!71;UBERON:0003075!1.01e-31!71;UBERON:0007284!1.01e-31!71;UBERON:0001049!6.16e-28!52;UBERON:0005068!6.16e-28!52;UBERON:0006241!6.16e-28!52;UBERON:0007135!6.16e-28!52;UBERON:0000955!2.75e-26!50;UBERON:0006238!2.75e-26!50;UBERON:0002616!1.23e-25!49;UBERON:0000033!9.90e-24!63;UBERON:0002020!7.09e-22!34;UBERON:0003080!1.97e-21!40;UBERON:0003056!5.44e-21!49;UBERON:0002780!1.49e-20!39;UBERON:0001890!1.49e-20!39;UBERON:0006240!1.49e-20!39;UBERON:0002791!7.73e-18!29;UBERON:0003528!7.73e-18!29;UBERON:0001893!7.73e-18!29;UBERON:0007811!8.71e-12!86;UBERON:0000956!9.36e-12!21;UBERON:0001869!9.36e-12!21;UBERON:0000203!9.36e-12!21;UBERON:0000153!2.29e-11!94;UBERON:0002619!1.31e-10!17;UBERON:0002420!1.89e-07!8;UBERON:0007245!1.89e-07!8;UBERON:0010009!1.89e-07!8;UBERON:0010011!1.89e-07!8;UBERON:0000454!1.89e-07!8;UBERON:0003076!5.66e-07!12;UBERON:0003057!5.66e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.43e-45,54;UBERON:0001017,4.11e-45,73;UBERON:0001016,1.10e-43,75;UBERON:0001049,2.86e-41,52;UBERON:0005068,2.86e-41,52;UBERON:0006241,2.86e-41,52;UBERON:0007135,2.86e-41,52;UBERON:0002346,3.96e-34,64;UBERON:0003075,3.96e-34,64;UBERON:0007284,3.96e-34,64;UBERON:0002020,1.21e-33,34;UBERON:0004121,1.04e-32,95;UBERON:0000924,1.04e-32,95;UBERON:0006601,1.04e-32,95;UBERON:0002616,2.23e-30,46;UBERON:0000955,1.38e-29,47;UBERON:0006238,1.38e-29,47;UBERON:0010371,6.16e-29,73;UBERON:0003080,4.56e-25,40;UBERON:0003528,1.68e-24,29;UBERON:0002791,1.68e-24,29;UBERON:0001893,1.68e-24,29;UBERON:0002780,2.66e-23,39;UBERON:0001890,2.66e-23,39;UBERON:0006240,2.66e-23,39;UBERON:0010314,2.62e-21,92;UBERON:0003056,2.27e-19,49;UBERON:0003076,4.07e-17,12;UBERON:0003057,4.07e-17,12;UBERON:0002420,1.64e-16,8;UBERON:0007245,1.64e-16,8;UBERON:0010009,1.64e-16,8;UBERON:0010011,1.64e-16,8;UBERON:0000454,1.64e-16,8;UBERON:0000025,1.53e-14,114;UBERON:0002240,4.16e-13,6;UBERON:0005174,4.16e-13,6;UBERON:0001137,4.16e-13,6;UBERON:0004111,4.52e-13,122;UBERON:0002021,1.14e-12,10;UBERON:0000411,1.14e-12,10;UBERON:0001950,1.14e-12,10;UBERON:0002619,1.48e-12,17;UBERON:0000956,1.30e-11,21;UBERON:0001869,1.30e-11,21;UBERON:0000203,1.30e-11,21;UBERON:0011216,1.39e-11,194;UBERON:0001948,4.09e-11,5;UBERON:0002315,4.09e-11,5;UBERON:0000369,3.33e-10,5;UBERON:0002435,3.33e-10,5;UBERON:0000204,3.33e-10,5;UBERON:0010082,3.33e-10,5;UBERON:0002950,4.63e-10,4;UBERON:0001891,4.63e-10,4;UBERON:0009616,4.63e-10,4;UBERON:0010286,4.63e-10,4;UBERON:0004684,3.85e-08,3;UBERON:0002275,3.85e-08,3;UBERON:0002038,6.16e-08,3;UBERON:0009663,6.16e-08,3;UBERON:0009661,6.16e-08,3;UBERON:0000125,6.16e-08,3;UBERON:0002308,6.16e-08,3;UBERON:0000483,1.70e-07,174;UBERON:0000119,2.54e-07,176;UBERON:0002257,2.80e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09843091367236,0.777719596297134,0.279972843250725,1.43752564364972,0,0,0,0,0,0,2.02316460859598,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.945041568321835,0.210324961351382,3.42781181284564,3.3130281142742,0.979926393719632,0.862609239164127,0.919218786610021,5.50579404996943,4.08599481872601,4.91540906419979,2.2420668914133,3.01909223887952,1.04182674111352,5.30447698102624,5.06486349028512,3.20876320331301,3.83017161115768,2.56269025438385,3.91438836233131,0.302904773332736,0.831287161174641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0,0,2.04946557908083,3.14170060220183,0,0,0,0,4.19413790333504,4.11750542536764,2.26177833803156,1.91206752211504,1.02286182932132,2.70124457927428,4.2182728397617,0.203678727700633,0,0,0,0.130120442962704,0,0.540186389416048,0.452114453507145,0.204109497453984,0.12811372028485,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.54356918568927,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,4.45404409050372,0,0,1.26203287766503,0.780877488593277,0.430846795465598,0.716906393857656,0.222798674082394,0.566153061577665,0.809621403349789,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,1.36175842301515,0.720244376125241,0.129358683782755,0.214337035031592,0.354680467284547,0.356737635204141,0.329098041204242,0,0,0,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.418176592028937,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,2.82375921308533,1.84130094602871,3.43737308063638,2.92150409984269,2.05524755931193,0.755393897389701,0,3.15224842256954,4.07828168085784,4.14208249401456,0.31136204275253,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.735374033800057,0.222246727801615,0.412070114477788,0,0.758091635291392,0.50695859978048,0.188626341386076,0.37456602987953,0.256100609619477,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0,0.147198920134397,0.685738504770831,0.177475806159338,0.715308569841963,0.290692833264657,0.188218760830661,0.423073039458382,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0,0.619747364743864,0.385813221962283,0.749431733813838,0.233931608445408,0,0.191288332068843,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09843091367236,0.777719596297134,0.279972843250725,1.43752564364972,0,0,0,0,0,0,2.02316460859598,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.945041568321835,0.210324961351382,3.42781181284564,3.3130281142742,0.979926393719632,0.862609239164127,0.919218786610021,5.50579404996943,4.08599481872601,4.91540906419979,2.2420668914133,3.01909223887952,1.04182674111352,5.30447698102624,5.06486349028512,3.20876320331301,3.83017161115768,2.56269025438385,3.91438836233131,0.302904773332736,0.831287161174641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0,0,2.04946557908083,3.14170060220183,0,0,0,0,4.19413790333504,4.11750542536764,2.26177833803156,1.91206752211504,1.02286182932132,2.70124457927428,4.2182728397617,0.203678727700633,0,0,0,0.130120442962704,0,0.540186389416048,0.452114453507145,0.204109497453984,0.12811372028485,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,1.54356918568927,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,4.45404409050372,0,0,1.26203287766503,0.780877488593277,0.430846795465598,0.716906393857656,0.222798674082394,0.566153061577665,0.809621403349789,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,1.36175842301515,0.720244376125241,0.129358683782755,0.214337035031592,0.354680467284547,0.356737635204141,0.329098041204242,0,0,0,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.418176592028937,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,2.82375921308533,1.84130094602871,3.43737308063638,2.92150409984269,2.05524755931193,0.755393897389701,0,3.15224842256954,4.07828168085784,4.14208249401456,0.31136204275253,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,0.735374033800057,0.222246727801615,0.412070114477788,0,0.758091635291392,0.50695859978048,0.188626341386076,0.37456602987953,0.256100609619477,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0,0.147198920134397,0.685738504770831,0.177475806159338,0.715308569841963,0.290692833264657,0.188218760830661,0.423073039458382,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0,0.619747364743864,0.385813221962283,0.749431733813838,0.233931608445408,0,0.191288332068843,0,0
|short_description=p2@Vat1l
|short_description=p2@Vat1l
}}
}}

Latest revision as of 13:35, 1 October 2015

Short description:p2@Vat1l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Vat1l_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -26bp_to_ENSMUST00000142591_5end
EntrezGene:Vat1l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Vat1l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.43e-4554
central nervous system4.11e-4573
nervous system1.10e-4375
neural tube2.86e-4152
neural rod2.86e-4152
future spinal cord2.86e-4152
neural keel2.86e-4152
neurectoderm3.96e-3464
neural plate3.96e-3464
presumptive neural plate3.96e-3464
gray matter1.21e-3334
ectoderm-derived structure1.04e-3295
ectoderm1.04e-3295
presumptive ectoderm1.04e-3295
regional part of brain2.23e-3046
brain1.38e-2947
future brain1.38e-2947
ecto-epithelium6.16e-2973
anterior neural tube4.56e-2540
brain grey matter1.68e-2429
regional part of telencephalon1.68e-2429
telencephalon1.68e-2429
regional part of forebrain2.66e-2339
forebrain2.66e-2339
future forebrain2.66e-2339
structure with developmental contribution from neural crest2.62e-2192
pre-chordal neural plate2.27e-1949
posterior neural tube4.07e-1712
chordal neural plate4.07e-1712
basal ganglion1.64e-168
nuclear complex of neuraxis1.64e-168
aggregate regional part of brain1.64e-168
collection of basal ganglia1.64e-168
cerebral subcortex1.64e-168
tube1.53e-14114
spinal cord4.16e-136
dorsal region element4.16e-136
dorsum4.16e-136
anatomical conduit4.52e-13122
occipital lobe1.14e-1210
visual cortex1.14e-1210
neocortex1.14e-1210
regional part of cerebral cortex1.48e-1217
cerebral cortex1.30e-1121
cerebral hemisphere1.30e-1121
pallium1.30e-1121
organ system subdivision1.39e-11194
regional part of spinal cord4.09e-115
gray matter of spinal cord4.09e-115
corpus striatum3.33e-105
striatum3.33e-105
ventral part of telencephalon3.33e-105
future corpus striatum3.33e-105
regional part of midbrain4.63e-104
midbrain4.63e-104
presumptive midbrain4.63e-104
midbrain neural tube4.63e-104
raphe nuclei3.85e-083
reticular formation3.85e-083
substantia nigra6.16e-083
telencephalic nucleus6.16e-083
midbrain nucleus6.16e-083
neural nucleus6.16e-083
nucleus of brain6.16e-083
epithelium1.70e-07174
cell layer2.54e-07176
ventral horn of spinal cord2.80e-073
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