FFCP PHASE1:Mm9::chrX:93650951..93650975,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15203 | |EntrezGene=15203 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0Z4 | |UniProt=Q9Z0Z4 | ||
|association_with_transcript=176bp_to_NM_001159628,NM_010417,uc009tuk.2,uc009tul.2_5end | |association_with_transcript=176bp_to_NM_001159628,NM_010417,uc009tuk.2,uc009tul.2_5end | ||
|cluster_id=chrX:93650951..93650975,+ | |||
|description=CAGE_peak_5_at_Heph_5end | |description=CAGE_peak_5_at_Heph_5end | ||
|id=chrX:93650951..93650975,+ | |id=chrX:93650951..93650975,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.89e-13!9;CL:0002251!2.89e-13!9;CL:0000239!4.54e-10!6;CL:0000677!4.54e-10!6;CL:0000212!4.54e-10!6;CL:0000584!4.54e-10!6;CL:0000075!1.88e-08!7;CL:0002076!4.84e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.44e-18,9;CL:0002251,1.44e-18,9;CL:0000239,4.21e-17,6;CL:0000677,4.21e-17,6;CL:0000584,4.21e-17,6;CL:0000075,1.48e-14,7;CL:0000066,1.47e-11,25;CL:0002076,1.33e-10,15;CL:0000682,1.10e-09,3;CL:0000223,1.27e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.28e-25!43;UBERON:0000344!5.40e-22!15;UBERON:0005409!9.72e-20!59;UBERON:0001242!5.38e-19!13;UBERON:0000060!5.38e-19!13;UBERON:0001262!5.38e-19!13;UBERON:0004786!5.38e-19!13;UBERON:0004923!1.56e-13!24;UBERON:0003350!2.89e-13!9;UBERON:0004808!2.89e-13!9;UBERON:0001277!2.89e-13!9;UBERON:0000485!2.01e-10!11;UBERON:0001007!6.01e-07!128;UBERON:0001555!6.01e-07!128;UBERON:0007026!6.01e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.44e-57,31;UBERON:0005409,7.71e-39,47;UBERON:0000344,2.39e-34,15;UBERON:0001242,6.53e-29,13;UBERON:0001262,6.53e-29,13;UBERON:0004786,6.53e-29,13;UBERON:0004923,2.86e-20,24;UBERON:0003350,1.44e-18,9;UBERON:0004808,1.44e-18,9;UBERON:0001277,1.44e-18,9;UBERON:0001007,5.91e-15,116;UBERON:0001555,5.91e-15,116;UBERON:0007026,5.91e-15,116;UBERON:0000485,5.99e-15,11;UBERON:0004119,1.35e-14,118;UBERON:0000925,1.35e-14,118;UBERON:0006595,1.35e-14,118;UBERON:0004921,1.35e-12,114;UBERON:0002108,1.40e-11,4;UBERON:0000331,2.37e-09,3;UBERON:0002116,2.37e-09,3;UBERON:0001204,2.37e-09,3;UBERON:0001168,2.37e-09,3;UBERON:0001962,5.90e-07,2;UBERON:0001961,5.90e-07,2;UBERON:0001744,5.90e-07,2 | |||
|phase1_expression=0,63.8624995980031,56.4199056843025,18.1478526784098,26.0465779572101,14.2697381125106,13.783145795136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.4780829667319,50.9288603969117,55.700500519157,42.6454376197484,42.0168903737484,18.2422482678119,18.6502296022349,45.4547546843375,0,0,0,1.73310971850765,0.831173226792462,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,3.31133251185274,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,8.43008282188352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.4160153366066,11.1069237998689,0,0,0.515469845288373,1.81515172161008,2.2237804384487,3.99473814836374,8.54152310780121,7.24675400785648,4.52403375840485,2.98434708061726,2.53453313254856,7.19055526923377,6.48414149624083,12.3467589417708,0,0,0,0,0,0.210407459670956,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,6.99554007911642,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,3.49960427887841,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,0,0.962757628775446,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0.354951612318675,0,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,63.8624995980031,56.4199056843025,18.1478526784098,26.0465779572101,14.2697381125106,13.783145795136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.4780829667319,50.9288603969117,55.700500519157,42.6454376197484,42.0168903737484,18.2422482678119,18.6502296022349,45.4547546843375,0,0,0,1.73310971850765,0.831173226792462,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,3.31133251185274,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,8.43008282188352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.4160153366066,11.1069237998689,0,0,0.515469845288373,1.81515172161008,2.2237804384487,3.99473814836374,8.54152310780121,7.24675400785648,4.52403375840485,2.98434708061726,2.53453313254856,7.19055526923377,6.48414149624083,12.3467589417708,0,0,0,0,0,0.210407459670956,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,6.99554007911642,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0,0,3.49960427887841,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,0,0.962757628775446,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0.354951612318675,0,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p5@Heph | |short_description=p5@Heph | ||
}} | }} |
Latest revision as of 00:52, 2 October 2015
Short description: | p5@Heph |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Heph_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 176bp_to_NM_001159628, NM_010417, uc009tuk.2, uc009tul.2_5end |
EntrezGene: | Heph |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.44e-18 | 9 |
epithelial cell of alimentary canal | 1.44e-18 | 9 |
brush border epithelial cell | 4.21e-17 | 6 |
gut absorptive cell | 4.21e-17 | 6 |
enterocyte | 4.21e-17 | 6 |
columnar/cuboidal epithelial cell | 1.48e-14 | 7 |
epithelial cell | 1.47e-11 | 25 |
endo-epithelial cell | 1.33e-10 | 15 |
M cell of gut | 1.10e-09 | 3 |
endodermal cell | 1.27e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.44e-57 | 31 |
gastrointestinal system | 7.71e-39 | 47 |
mucosa | 2.39e-34 | 15 |
intestinal mucosa | 6.53e-29 | 13 |
wall of intestine | 6.53e-29 | 13 |
gastrointestinal system mucosa | 6.53e-29 | 13 |
organ component layer | 2.86e-20 | 24 |
epithelium of mucosa | 1.44e-18 | 9 |
gastrointestinal system epithelium | 1.44e-18 | 9 |
intestinal epithelium | 1.44e-18 | 9 |
digestive system | 5.91e-15 | 116 |
digestive tract | 5.91e-15 | 116 |
primitive gut | 5.91e-15 | 116 |
simple columnar epithelium | 5.99e-15 | 11 |
endoderm-derived structure | 1.35e-14 | 118 |
endoderm | 1.35e-14 | 118 |
presumptive endoderm | 1.35e-14 | 118 |
subdivision of digestive tract | 1.35e-12 | 114 |
small intestine | 1.40e-11 | 4 |
ileal mucosa | 2.37e-09 | 3 |
ileum | 2.37e-09 | 3 |
mucosa of small intestine | 2.37e-09 | 3 |
wall of small intestine | 2.37e-09 | 3 |
gut-associated lymphoid tissue | 5.90e-07 | 2 |
mucosa-associated lymphoid tissue | 5.90e-07 | 2 |
lymphoid tissue | 5.90e-07 | 2 |