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FFCP PHASE1:Mm9::chr7:71647043..71647062,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11784
|EntrezGene=11784
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=E9Q0G5
|UniProt=E9Q0G5
|association_with_transcript=19bp_to_ENSMUST00000137732_5end
|association_with_transcript=19bp_to_ENSMUST00000137732_5end
|cluster_id=chr7:71647043..71647062,+
|description=CAGE_peak_5_at_Apba2_5end
|description=CAGE_peak_5_at_Apba2_5end
|id=chr7:71647043..71647062,+
|id=chr7:71647043..71647062,+
|ontology_enrichment_celltype=CL:0000540!1.68e-19!33;CL:0000047!1.68e-19!33;CL:0000031!1.68e-19!33;CL:0000404!1.68e-19!33;CL:0000117!3.26e-17!23;CL:0000337!3.26e-17!23;CL:0002319!5.55e-16!43;CL:0000221!5.93e-16!44;CL:0000133!5.93e-16!44;CL:0000393!3.08e-14!39;CL:0000211!3.08e-14!39;CL:0000055!1.31e-11!50
|ontology_enrichment_celltype=CL:0000540!1.68e-19!33;CL:0000047!1.68e-19!33;CL:0000031!1.68e-19!33;CL:0000404!1.68e-19!33;CL:0000117!3.26e-17!23;CL:0000337!3.26e-17!23;CL:0002319!5.55e-16!43;CL:0000221!5.93e-16!44;CL:0000133!5.93e-16!44;CL:0000393!3.08e-14!39;CL:0000211!3.08e-14!39;CL:0000055!1.31e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.90e-27,23;CL:0000337,2.90e-27,23;CL:0000540,1.19e-26,33;CL:0000047,1.19e-26,33;CL:0000031,1.19e-26,33;CL:0000404,1.19e-26,33;CL:0000393,4.03e-21,39;CL:0000211,4.03e-21,39;CL:0002319,5.19e-21,43;CL:0000221,2.58e-20,44;CL:0000133,2.58e-20,44;CL:0002321,2.08e-09,70;CL:0002609,8.18e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.49e-33!73;UBERON:0005743!8.49e-33!73;UBERON:0000073!1.02e-32!75;UBERON:0001016!1.02e-32!75;UBERON:0004121!4.76e-30!102;UBERON:0000924!4.76e-30!102;UBERON:0006601!4.76e-30!102;UBERON:0002346!4.25e-28!71;UBERON:0003075!4.25e-28!71;UBERON:0007284!4.25e-28!71;UBERON:0000033!3.68e-25!63;UBERON:0001049!2.62e-24!52;UBERON:0005068!2.62e-24!52;UBERON:0006241!2.62e-24!52;UBERON:0007135!2.62e-24!52;UBERON:0000955!8.81e-23!50;UBERON:0006238!8.81e-23!50;UBERON:0002616!3.41e-22!49;UBERON:0003056!2.70e-21!49;UBERON:0002020!4.41e-21!34;UBERON:0003080!7.47e-18!40;UBERON:0002791!1.54e-17!29;UBERON:0003528!1.54e-17!29;UBERON:0001893!1.54e-17!29;UBERON:0002780!3.25e-17!39;UBERON:0001890!3.25e-17!39;UBERON:0006240!3.25e-17!39;UBERON:0007811!2.12e-16!86;UBERON:0000153!1.60e-15!94;UBERON:0000956!2.79e-12!21;UBERON:0001869!2.79e-12!21;UBERON:0000203!2.79e-12!21;UBERON:0002619!1.07e-09!17;UBERON:0002021!2.19e-08!10;UBERON:0000411!2.19e-08!10;UBERON:0001950!2.19e-08!10;UBERON:0003076!4.61e-07!12;UBERON:0003057!4.61e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.65e-45,73;UBERON:0001016,1.59e-43,75;UBERON:0004121,2.40e-40,95;UBERON:0000924,2.40e-40,95;UBERON:0006601,2.40e-40,95;UBERON:0002346,5.52e-39,64;UBERON:0003075,5.52e-39,64;UBERON:0007284,5.52e-39,64;UBERON:0000073,6.16e-37,54;UBERON:0002020,1.18e-34,34;UBERON:0001049,1.88e-34,52;UBERON:0005068,1.88e-34,52;UBERON:0006241,1.88e-34,52;UBERON:0007135,1.88e-34,52;UBERON:0010371,2.44e-32,73;UBERON:0003528,8.68e-29,29;UBERON:0002791,8.68e-29,29;UBERON:0001893,8.68e-29,29;UBERON:0000955,2.15e-28,47;UBERON:0006238,2.15e-28,47;UBERON:0003056,2.70e-28,49;UBERON:0002616,1.77e-27,46;UBERON:0003080,5.68e-25,40;UBERON:0002780,5.93e-24,39;UBERON:0001890,5.93e-24,39;UBERON:0006240,5.93e-24,39;UBERON:0010314,1.26e-22,92;UBERON:0000956,4.29e-20,21;UBERON:0001869,4.29e-20,21;UBERON:0000203,4.29e-20,21;UBERON:0002619,8.01e-16,17;UBERON:0002021,9.23e-13,10;UBERON:0000411,9.23e-13,10;UBERON:0001950,9.23e-13,10;UBERON:0002420,1.06e-09,8;UBERON:0007245,1.06e-09,8;UBERON:0010009,1.06e-09,8;UBERON:0010011,1.06e-09,8;UBERON:0000454,1.06e-09,8;UBERON:0003076,1.21e-09,12;UBERON:0003057,1.21e-09,12;UBERON:0000025,4.80e-09,114;UBERON:0002240,4.33e-08,6;UBERON:0005174,4.33e-08,6;UBERON:0001137,4.33e-08,6;UBERON:0004111,9.87e-08,122;UBERON:0011216,3.13e-07,194;UBERON:0000369,5.83e-07,5;UBERON:0002435,5.83e-07,5;UBERON:0000204,5.83e-07,5;UBERON:0010082,5.83e-07,5;UBERON:0001948,6.95e-07,5;UBERON:0002315,6.95e-07,5
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,5.46254444320914,5.28990979272033,13.3104594736298,0,0,0,0,0,1.19840044207362,1.15265491596466,3.62913643079672,4.18518408828241,3.36519938162211,4.57041575046086,3.97563373712904,4.16468717330844,2.1086003624012,7.35375029288017,7.70811166995721,3.95830748064082,3.99376986466233,6.85808696197008,3.38504281328916,4.16730696445408,3.07101298901519,3.37657566019008,3.0559649555362,2.94628585473668,3.84403538157578,5.21918448310842,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.520455980298408,0.913396434936424,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,2.92780797011547,5.02672096352292,0,0,0,0,3.44518470631092,2.28750301409313,4.90051973240171,4.34560800480691,5.62574006126727,2.0778804455956,3.56930778749067,0,0,0,0,0.390361328888111,0.919608417733892,1.26043490863744,1.50704817835715,4.83059143974428,4.61209393025459,4.40398105430725,1.29351685369508,0.215567992932842,0.756424320671277,0.351902248327898,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,5.04695876553905,5.04232600658494,0,0,0,0,0.38660238396628,0.403367049246685,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0,0.339490171550376,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,2.57865710502847,0,0,0,1.56175497718655,1.29254038639679,1.43381278771531,1.11399337041197,1.41538265394416,0.404810701674894,1.75353514746787,0.790575555893047,2.24924921495265,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08036656418786,0.258717367565509,0,0.532020700926821,0.713475270408282,0.493647061806363,0,0,0,0,0,0,0,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0.608175645870493,0.410843828659309,0,0,0.39736270956253,0,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0.221985953374065,0,0,0.19318959403219,0,0,0,0,5.64751842617067,3.22227665555024,1.71868654031819,5.32744865265431,5.48066015816514,3.7769694869485,2.02506750069542,5.85417564191487,4.98456649882625,6.73088405277366,1.14166082342594,1.99512436700516,2.39027048055788,0.243106717068294,1.25767897576789,0.735374033800057,1.11123363900808,0.206035057238894,0.320919209591815,1.51618327058278,1.01391719956096,0.565879024158229,0.842773567228942,0.448176066834085,0.459483751644906,2.38146845641537,1.15884325944855,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,1.03520318456864,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.830445126869219,1.18205378850676,0,0.309873682371932,0.964533054905707,2.24829520144151,0.467863216890817,0.429742108096597,0,0,0
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,5.46254444320914,5.28990979272033,13.3104594736298,0,0,0,0,0,1.19840044207362,1.15265491596466,3.62913643079672,4.18518408828241,3.36519938162211,4.57041575046086,3.97563373712904,4.16468717330844,2.1086003624012,7.35375029288017,7.70811166995721,3.95830748064082,3.99376986466233,6.85808696197008,3.38504281328916,4.16730696445408,3.07101298901519,3.37657566019008,3.0559649555362,2.94628585473668,3.84403538157578,5.21918448310842,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0.520455980298408,0.913396434936424,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,2.92780797011547,5.02672096352292,0,0,0,0,3.44518470631092,2.28750301409313,4.90051973240171,4.34560800480691,5.62574006126727,2.0778804455956,3.56930778749067,0,0,0,0,0.390361328888111,0.919608417733892,1.26043490863744,1.50704817835715,4.83059143974428,4.61209393025459,4.40398105430725,1.29351685369508,0.215567992932842,0.756424320671277,0.351902248327898,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,5.04695876553905,5.04232600658494,0,0,0,0,0.38660238396628,0.403367049246685,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0,0.339490171550376,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,2.57865710502847,0,0,0,1.56175497718655,1.29254038639679,1.43381278771531,1.11399337041197,1.41538265394416,0.404810701674894,1.75353514746787,0.790575555893047,2.24924921495265,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08036656418786,0.258717367565509,0,0.532020700926821,0.713475270408282,0.493647061806363,0,0,0,0,0,0,0,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0.608175645870493,0.410843828659309,0,0,0.39736270956253,0,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0.221985953374065,0,0,0.19318959403219,0,0,0,0,5.64751842617067,3.22227665555024,1.71868654031819,5.32744865265431,5.48066015816514,3.7769694869485,2.02506750069542,5.85417564191487,4.98456649882625,6.73088405277366,1.14166082342594,1.99512436700516,2.39027048055788,0.243106717068294,1.25767897576789,0.735374033800057,1.11123363900808,0.206035057238894,0.320919209591815,1.51618327058278,1.01391719956096,0.565879024158229,0.842773567228942,0.448176066834085,0.459483751644906,2.38146845641537,1.15884325944855,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,1.03520318456864,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.830445126869219,1.18205378850676,0,0.309873682371932,0.964533054905707,2.24829520144151,0.467863216890817,0.429742108096597,0,0,0
|short_description=p5@Apba2
|short_description=p5@Apba2
}}
}}

Latest revision as of 00:42, 27 September 2015

Short description:p5@Apba2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Apba2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 19bp_to_ENSMUST00000137732_5end
EntrezGene:Apba2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Apba2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.16
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C64.83
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G84.40
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G15.04
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.65e-4573
nervous system1.59e-4375
ectoderm-derived structure2.40e-4095
ectoderm2.40e-4095
presumptive ectoderm2.40e-4095
neurectoderm5.52e-3964
neural plate5.52e-3964
presumptive neural plate5.52e-3964
regional part of nervous system6.16e-3754
gray matter1.18e-3434
neural tube1.88e-3452
neural rod1.88e-3452
future spinal cord1.88e-3452
neural keel1.88e-3452
ecto-epithelium2.44e-3273
brain grey matter8.68e-2929
regional part of telencephalon8.68e-2929
telencephalon8.68e-2929
brain2.15e-2847
future brain2.15e-2847
pre-chordal neural plate2.70e-2849
regional part of brain1.77e-2746
anterior neural tube5.68e-2540
regional part of forebrain5.93e-2439
forebrain5.93e-2439
future forebrain5.93e-2439
structure with developmental contribution from neural crest1.26e-2292
cerebral cortex4.29e-2021
cerebral hemisphere4.29e-2021
pallium4.29e-2021
regional part of cerebral cortex8.01e-1617
occipital lobe9.23e-1310
visual cortex9.23e-1310
neocortex9.23e-1310
basal ganglion1.06e-098
nuclear complex of neuraxis1.06e-098
aggregate regional part of brain1.06e-098
collection of basal ganglia1.06e-098
cerebral subcortex1.06e-098
posterior neural tube1.21e-0912
chordal neural plate1.21e-0912
tube4.80e-09114
spinal cord4.33e-086
dorsal region element4.33e-086
dorsum4.33e-086
anatomical conduit9.87e-08122
organ system subdivision3.13e-07194
corpus striatum5.83e-075
striatum5.83e-075
ventral part of telencephalon5.83e-075
future corpus striatum5.83e-075
regional part of spinal cord6.95e-075
gray matter of spinal cord6.95e-075
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