FFCP PHASE1:Mm9::chr7:58713316..58713326,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1129 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-226bp_to_ENSMUST00000077381_5end | |association_with_transcript=-226bp_to_ENSMUST00000077381_5end | ||
|cluster_id=chr7:58713316..58713326,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000077381_5end | |description=CAGE_peak_1_at_ENSMUST00000077381_5end | ||
|id=chr7:58713316..58713326,+ | |id=chr7:58713316..58713326,+ | ||
|ontology_enrichment_celltype=CL:0000063!9.29e-24!66;CL:0000988!5.11e-18!32;CL:0002032!5.11e-18!32;CL:0000037!5.11e-18!32;CL:0000566!5.11e-18!32;CL:0000837!5.11e-18!32;CL:0000144!2.81e-17!121;CL:0000012!2.81e-17!121;CL:0002320!3.02e-15!46;CL:0000134!3.02e-15!46;CL:0002371!3.65e-15!118;CL:0000219!3.92e-14!54;CL:0002031!4.55e-14!25;CL:0000548!4.71e-14!115;CL:0000004!4.71e-14!115;CL:0000255!4.71e-14!115;CL:0000034!4.87e-12!97;CL:0000838!3.20e-11!12;CL:0000084!3.73e-10!11;CL:0000827!3.73e-10!11;CL:0000738!3.74e-10!17;CL:0002087!3.74e-10!17;CL:0000791!3.83e-10!9;CL:0000789!3.83e-10!9;CL:0002420!3.83e-10!9;CL:0002419!3.83e-10!9;CL:0000790!3.83e-10!9;CL:0000542!4.06e-10!13;CL:0000051!4.06e-10!13;CL:0000624!2.16e-09!8;CL:0000049!3.26e-09!19;CL:0000723!3.01e-08!91;CL:0000048!3.01e-08!91;CL:0000893!5.69e-08!6;CL:0002489!5.69e-08!6;CL:0000898!5.69e-08!6;CL:0000809!5.69e-08!6;CL:0000810!5.69e-08!6;CL:0000895!5.69e-08!6;CL:0000808!5.69e-08!6;CL:0000894!5.69e-08!6;CL:0000806!5.69e-08!6;CL:0000807!5.69e-08!6;CL:0000805!5.69e-08!6;CL:0002425!5.69e-08!6;CL:0002436!5.69e-08!6;CL:0002427!5.69e-08!6;CL:0002428!5.69e-08!6;CL:0002429!5.69e-08!6;CL:0002433!5.69e-08!6;CL:0002431!5.69e-08!6;CL:0002432!5.69e-08!6;CL:0000066!3.12e-07!25 | |ontology_enrichment_celltype=CL:0000063!9.29e-24!66;CL:0000988!5.11e-18!32;CL:0002032!5.11e-18!32;CL:0000037!5.11e-18!32;CL:0000566!5.11e-18!32;CL:0000837!5.11e-18!32;CL:0000144!2.81e-17!121;CL:0000012!2.81e-17!121;CL:0002320!3.02e-15!46;CL:0000134!3.02e-15!46;CL:0002371!3.65e-15!118;CL:0000219!3.92e-14!54;CL:0002031!4.55e-14!25;CL:0000548!4.71e-14!115;CL:0000004!4.71e-14!115;CL:0000255!4.71e-14!115;CL:0000034!4.87e-12!97;CL:0000838!3.20e-11!12;CL:0000084!3.73e-10!11;CL:0000827!3.73e-10!11;CL:0000738!3.74e-10!17;CL:0002087!3.74e-10!17;CL:0000791!3.83e-10!9;CL:0000789!3.83e-10!9;CL:0002420!3.83e-10!9;CL:0002419!3.83e-10!9;CL:0000790!3.83e-10!9;CL:0000542!4.06e-10!13;CL:0000051!4.06e-10!13;CL:0000624!2.16e-09!8;CL:0000049!3.26e-09!19;CL:0000723!3.01e-08!91;CL:0000048!3.01e-08!91;CL:0000893!5.69e-08!6;CL:0002489!5.69e-08!6;CL:0000898!5.69e-08!6;CL:0000809!5.69e-08!6;CL:0000810!5.69e-08!6;CL:0000895!5.69e-08!6;CL:0000808!5.69e-08!6;CL:0000894!5.69e-08!6;CL:0000806!5.69e-08!6;CL:0000807!5.69e-08!6;CL:0000805!5.69e-08!6;CL:0002425!5.69e-08!6;CL:0002436!5.69e-08!6;CL:0002427!5.69e-08!6;CL:0002428!5.69e-08!6;CL:0002429!5.69e-08!6;CL:0002433!5.69e-08!6;CL:0002431!5.69e-08!6;CL:0002432!5.69e-08!6;CL:0000066!3.12e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.25e-17,32;CL:0002032,1.25e-17,32;CL:0000037,1.25e-17,32;CL:0000837,1.25e-17,32;CL:0002320,4.83e-17,46;CL:0000134,4.83e-17,46;CL:0000219,7.88e-17,54;CL:0000049,2.88e-13,19;CL:0002031,1.79e-11,25;CL:0000034,2.20e-11,97;CL:0000763,8.40e-09,16;CL:0000553,4.24e-08,6;CL:0000556,4.24e-08,6;CL:0000068,1.14e-07,3;CL:0002202,1.14e-07,3;CL:0000069,1.14e-07,3;CL:0002632,1.14e-07,3;CL:0002368,1.14e-07,3;CL:0000307,1.14e-07,3;CL:0000377,1.14e-07,3;CL:0000349,1.33e-07,3;CL:0000351,1.33e-07,3;CL:0000723,1.75e-07,91;CL:0000048,1.75e-07,91;CL:0000738,5.06e-07,17;CL:0002087,5.06e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.02e-15!46;UBERON:0000344!1.48e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.83e-17,46;UBERON:0002371,8.40e-09,16;UBERON:0003126,1.14e-07,3;UBERON:0001005,1.14e-07,3;UBERON:0007196,1.14e-07,3;UBERON:0001558,1.14e-07,3;UBERON:0000358,1.33e-07,3;UBERON:0000307,1.33e-07,3;UBERON:0007010,1.33e-07,3 | |||
|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,1.00727563147134,2.10251376535973,0.516493293766305,3.94208422024667,5.14941957908386,9.75942418885378,5.18519033469687,0.856003649656029,0.34968160967599,0,3.44207954562704,4.19737126876888,1.57731082679119,1.09691546884591,1.27316895539409,0,0,8.35839325244593,1.59992422793407,2.52350209173887,0.57423196411502,1.7230479846363,0.646413698057667,2.85035129184561,1.00812051903972,1.77384408524244,0.635030673459631,0,0,0.866554859253824,0.664938581433969,0.612508068787107,1.25559489221072,1.5626706890476,0,1.17646297606203,0,2.42755176515577,0,0,0,0,0,0,0,0,0,2.34895648480831,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,3.25622631332691,1.88928900266964,1.15945795480671,2.58127163094416,0,0,0,0,0,0,1.03914401841148,3.88673531961374,0.845060518660083,0,0,0,7.36069539438128,3.80039798212648,7.07734223020697,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,2.27648736561249,8.99854096490112,2.1601938602421,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21327912387941,11.0659600059328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,2.03974115992626,0.979660166265606,1.10559979043539,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,3.99574716073316,4.30626511725483,5.70807695637867,0,0,0,0,0,0,0,0,1.03111909406213,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.480446541314382,0,0.454999239389536,0,0,1.00727563147134,2.10251376535973,0.516493293766305,3.94208422024667,5.14941957908386,9.75942418885378,5.18519033469687,0.856003649656029,0.34968160967599,0,3.44207954562704,4.19737126876888,1.57731082679119,1.09691546884591,1.27316895539409,0,0,8.35839325244593,1.59992422793407,2.52350209173887,0.57423196411502,1.7230479846363,0.646413698057667,2.85035129184561,1.00812051903972,1.77384408524244,0.635030673459631,0,0,0.866554859253824,0.664938581433969,0.612508068787107,1.25559489221072,1.5626706890476,0,1.17646297606203,0,2.42755176515577,0,0,0,0,0,0,0,0,0,2.34895648480831,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,3.25622631332691,1.88928900266964,1.15945795480671,2.58127163094416,0,0,0,0,0,0,1.03914401841148,3.88673531961374,0.845060518660083,0,0,0,7.36069539438128,3.80039798212648,7.07734223020697,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,2.27648736561249,8.99854096490112,2.1601938602421,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21327912387941,11.0659600059328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,2.03974115992626,0.979660166265606,1.10559979043539,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,3.99574716073316,4.30626511725483,5.70807695637867,0,0,0,0,0,0,0,0,1.03111909406213,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000077381 | |short_description=p1@ENSMUST00000077381 | ||
}} | }} |
Latest revision as of 10:42, 5 August 2015
Short description: | p1@ENSMUST00000077381 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000077381_5end |
Coexpression cluster: | MCL_coexpression_mm9:1129 |
Association with transcript: | -226bp_to_ENSMUST00000077381_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.25e-17 | 32 |
hematopoietic oligopotent progenitor cell | 1.25e-17 | 32 |
hematopoietic stem cell | 1.25e-17 | 32 |
hematopoietic multipotent progenitor cell | 1.25e-17 | 32 |
connective tissue cell | 4.83e-17 | 46 |
mesenchymal cell | 4.83e-17 | 46 |
motile cell | 7.88e-17 | 54 |
common myeloid progenitor | 2.88e-13 | 19 |
hematopoietic lineage restricted progenitor cell | 1.79e-11 | 25 |
stem cell | 2.20e-11 | 97 |
myeloid cell | 8.40e-09 | 16 |
megakaryocyte progenitor cell | 4.24e-08 | 6 |
megakaryocyte | 4.24e-08 | 6 |
duct epithelial cell | 1.14e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.14e-07 | 3 |
branched duct epithelial cell | 1.14e-07 | 3 |
epithelial cell of lower respiratory tract | 1.14e-07 | 3 |
respiratory epithelial cell | 1.14e-07 | 3 |
tracheal epithelial cell | 1.14e-07 | 3 |
tracheoblast | 1.14e-07 | 3 |
extraembryonic cell | 1.33e-07 | 3 |
trophoblast cell | 1.33e-07 | 3 |
somatic stem cell | 1.75e-07 | 91 |
multi fate stem cell | 1.75e-07 | 91 |
leukocyte | 5.06e-07 | 17 |
nongranular leukocyte | 5.06e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.83e-17 | 46 |
bone marrow | 8.40e-09 | 16 |
trachea | 1.14e-07 | 3 |
respiratory airway | 1.14e-07 | 3 |
tracheobronchial tree | 1.14e-07 | 3 |
lower respiratory tract | 1.14e-07 | 3 |
blastocyst | 1.33e-07 | 3 |
blastula | 1.33e-07 | 3 |
cleaving embryo | 1.33e-07 | 3 |